Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p029477 Quercus lobata HOM05D001477 ORTHO05D001182 3.3e-192 674.9 335 100.0
QL01p054884 Quercus lobata HOM05D001477 ORTHO05D001182 1.9e-168 595.9 449 72.4
QL03p072973 Quercus lobata HOM05D001477 ORTHO05D001182 2.1e-154 549.3 449 67.5
QL05p018022 Quercus lobata HOM05D001477 ORTHO05D001182 1.3e-26 124.8 405 31.1
QL05p032198 Quercus lobata HOM05D001477 ORTHO05D001182 3.8e-23 113.2 433 27.9
Hma1.2p1_0978F.1_g243340 Hydrangea macrophylla HOM05D001477 ORTHO05D001182 3.1e-17 93.6 482 24.3
Hma1.2p1_2617F.1_g325500 Hydrangea macrophylla HOM05D001477 ORTHO05D001182 5.5e-14 82.8 321 28.3
QL05p009096 Quercus lobata HOM05D001477 ORTHO05D001182 2.7e-13 80.5 390 27.2
QL02p089995 Quercus lobata HOM05D001477 ORTHO05D001182 6.7e-12 75.9 187 32.6
Cpa.g.sc116.90 Carica papaya HOM05D001477 ORTHO05D001182 5.7e-11 72.8 295 26.8
CSS0009889 Camellia sinensis var. sinensis HOM05D001477 ORTHO05D001182 7.4e-11 72.4 441 24.3
Nitab4.5_0002656g0100 Nicotiana tabacum HOM05D001477 ORTHO05D001182 3.7e-10 70.1 74 51.4
Peaxi162Scf00421g00336 Petunia axillaris HOM05D001374 ORTHO05D001182 4.8e-10 69.7 216 28.2
QL01p017812 Quercus lobata HOM05D001477 ORTHO05D001182 4.8e-10 69.7 334 25.7
Potri.012G099400 Populus trichocarpa HOM05D001477 ORTHO05D001182 6.3e-10 69.3 286 27.6
Actinidia32125 Actinidia chinensis HOM05D000617 ORTHO05D000229 1.4e-09 68.2 459 24.0
Sabra12G0072600 Salix brachista HOM05D001477 ORTHO05D001182 1.4e-09 68.2 285 26.0
QL05p018038 Quercus lobata HOM05D022380 ORTHO05D025620 3.1e-09 67.0 67 56.7
RcHm_v2.0_Chr4g0421851 Rosa chinensis HOM05D000312 ORTHO05D000221 3.1e-09 67.0 232 26.7
Manes.11G030101 Manihot esculenta HOM05D001477 ORTHO05D001182 4.1e-09 66.6 295 25.4
Actinidia26014 Actinidia chinensis HOM05D001477 ORTHO05D001182 1.2e-08 65.1 209 28.2
MD03G1253900 Malus domestica HOM05D000051 ORTHO05D000015 1.2e-08 65.1 154 34.4
QL05p018061 Quercus lobata HOM05D001477 ORTHO05D001182 1.2e-08 65.1 243 25.5
Nitab4.5_0009241g0030 Nicotiana tabacum HOM05D001477 ORTHO05D001182 1.5e-08 64.7 53 56.6
CANSAT56G1846 Cannabis sativa HOM05D001477 ORTHO05D001182 2.0e-08 64.3 288 25.3
FvH4_2g40800 Fragaria vesca HOM05D000051 ORTHO05D000015 2.0e-08 64.3 296 24.7
FvH4_5g22230 Fragaria vesca HOM05D000564 ORTHO05D035455 2.0e-08 64.3 348 23.9
Hma1.2p1_2457F.1_g322490 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 2.0e-08 64.3 220 28.2
CANSAT56G4105 Cannabis sativa HOM05D000051 ORTHO05D010453 3.4e-08 63.5 263 28.1
Ciclev10025305m.g Citrus clementina HOM05D001477 ORTHO05D001182 7.7e-08 62.4 290 26.2
FAN20G2836 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.7e-08 62.4 289 26.6
Nitab4.5_0005029g0060 Nicotiana tabacum HOM05D001477 ORTHO05D001182 1.0e-07 62.0 48 58.3
Peaxi162Scf00421g00326 Petunia axillaris HOM05D001477 ORTHO05D001182 1.3e-07 61.6 49 55.1
vmacro18828 Vaccinium macrocarpon HOM05D001477 ORTHO05D001182 2.9e-07 60.5 67 44.8
Migut.M00842 Erythranthe guttata HOM05D000051 ORTHO05D000015 3.8e-07 60.1 305 24.3
FAN08G3633 Fragaria x ananassa HOM05D001477 ORTHO05D035455 3.8e-07 60.1 405 23.7
FAN18G2995 Fragaria x ananassa HOM05D000312 ORTHO05D000221 3.8e-07 60.1 221 29.0
QL11p055690 Quercus lobata HOM05D001477 ORTHO05D001182 3.8e-07 60.1 151 30.5
Sopen06g021920 Solanum pennellii HOM05D001477 ORTHO05D001182 3.8e-07 60.1 74 47.3
Migut.I00955 Erythranthe guttata HOM05D005930 ORTHO05D003423 5.0e-07 59.7 168 27.4
Migut.M00848 Erythranthe guttata HOM05D000051 ORTHO05D000015 5.0e-07 59.7 294 24.8
Dinv17822 Davidia involucrata HOM05D000051 ORTHO05D000015 6.5e-07 59.3 111 33.3
Manes.08G140800 Manihot esculenta HOM05D000312 ORTHO05D000221 6.5e-07 59.3 224 26.3
Ciclev10033697m.g Citrus clementina HOM05D001477 ORTHO05D001182 8.5e-07 58.9 303 25.1
Migut.M00845 Erythranthe guttata HOM05D000051 ORTHO05D000015 8.5e-07 58.9 215 28.4
Migut.O00405 Erythranthe guttata HOM05D005930 ORTHO05D003423 8.5e-07 58.9 239 25.1
FAN04G2981 Fragaria x ananassa HOM05D000312 ORTHO05D000221 8.5e-07 58.9 220 27.7
TPR.G14580 Trifolium pratense HOM05D000312 ORTHO05D000221 8.5e-07 58.9 258 27.5
Aqoxy1G01746 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.1e-06 58.5 57 45.6
CAN.G635.8 Capsicum annuum HOM05D001477 ORTHO05D001182 1.1e-06 58.5 48 56.2
COL.COLO4_07576 Corchorus olitorius HOM05D001477 ORTHO05D001182 1.1e-06 58.5 76 43.4
Migut.M00846 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.1e-06 58.5 238 25.2
FAN13G2346 Fragaria x ananassa HOM05D000312 ORTHO05D000221 1.1e-06 58.5 220 28.2
FAN14G5862 Fragaria x ananassa HOM05D004140 ORTHO05D006116 1.1e-06 58.5 228 28.5
FvH4_6g18740 Fragaria vesca HOM05D000312 ORTHO05D000221 1.4e-06 58.2 228 27.6
Nitab4.5_0000255g0120 Nicotiana tabacum HOM05D001477 ORTHO05D001182 1.4e-06 58.2 48 56.2
Peaxi162Scf00548g00426 Petunia axillaris HOM05D001396 ORTHO05D000493 1.4e-06 58.2 272 23.9
QL05p074499 Quercus lobata HOM05D000051 ORTHO05D000015 1.4e-06 58.2 228 28.9
FvH4_5g09560 Fragaria vesca HOM05D000312 ORTHO05D000221 1.9e-06 57.8 220 27.7
PSO017G2642 Papaver somniferum HOM05D000051 ORTHO05D000015 1.9e-06 57.8 192 29.2
Peaxi162Scf00207g01154 Petunia axillaris HOM05D000106 ORTHO05D000160 1.9e-06 57.8 51 52.9
QL05p018582 Quercus lobata HOM05D001477 ORTHO05D001182 1.9e-06 57.8 468 22.9
CANSAT80G2150 Cannabis sativa HOM05D000051 ORTHO05D010453 2.5e-06 57.4 61 47.5
CAN.G635.21 Capsicum annuum HOM05D001477 ORTHO05D001182 2.5e-06 57.4 45 60.0
CAN.G635.4 Capsicum annuum HOM05D001477 ORTHO05D001182 2.5e-06 57.4 55 56.4
Lsat_1_v5_gn_4_96261 Lactuca sativa HOM05D000862 ORTHO05D000943 2.5e-06 57.4 71 46.5
Lj3g0014094 Lotus japonicus HOM05D001477 ORTHO05D001182 2.5e-06 57.4 302 26.2
PGR031G3013 Punica granatum HOM05D000312 ORTHO05D000221 2.5e-06 57.4 223 25.1
QL05p074592 Quercus lobata HOM05D000051 ORTHO05D000015 2.5e-06 57.4 222 24.8
RcHm_v2.0_Chr1g0365081 Rosa chinensis HOM05D000312 ORTHO05D000221 2.5e-06 57.4 258 26.4
Sed0016693 Sechium edule HOM05D001477 ORTHO05D001182 2.5e-06 57.4 52 50.0
Aqoxy2G00704 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 3.2e-06 57.0 236 27.5
Ciclev10027156m.g Citrus clementina HOM05D001477 ORTHO05D001182 3.2e-06 57.0 55 47.3
Duzib205G1321 Durio zibethinus HOM05D000051 ORTHO05D001182 3.2e-06 57.0 105 32.4
PSO832G2072 Papaver somniferum HOM05D000051 ORTHO05D000015 3.2e-06 57.0 50 54.0
AUR62023879 Chenopodium quinoa HOM05D001477 ORTHO05D001182 4.2e-06 56.6 50 48.0
Dinv18568 Davidia involucrata HOM05D005918 ORTHO05D008619 4.2e-06 56.6 249 28.1
Migut.E00546 Erythranthe guttata HOM05D005930 ORTHO05D003423 4.2e-06 56.6 213 28.2
Rhsim07G0244500 Rhododendron simsii HOM05D001477 ORTHO05D011640 4.2e-06 56.6 313 24.9
CANSAT54G2398 Cannabis sativa HOM05D000051 ORTHO05D010453 5.5e-06 56.2 228 26.8
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 5.5e-06 56.2 204 25.0
Ciclev10000694m.g Citrus clementina HOM05D001477 ORTHO05D001182 5.5e-06 56.2 227 26.9
Ciclev10020065m.g Citrus clementina HOM05D000051 ORTHO05D000015 5.5e-06 56.2 56 50.0
Peaxi162Scf00038g01239 Petunia axillaris HOM05D001477 ORTHO05D001182 5.5e-06 56.2 59 49.2
Peaxi162Scf00207g01132 Petunia axillaris HOM05D001477 ORTHO05D001182 5.5e-06 56.2 49 53.1
Aqoxy6G03015 Aquilegia oxysepala HOM05D000051 ORTHO05D031295 7.2e-06 55.8 177 27.1
arahy.Tifrunner.gnm1.ann1.NRK3PF Arachis hypogaea HOM05D001477 ORTHO05D001182 7.2e-06 55.8 325 25.5
CAN.G825.31 Capsicum annuum HOM05D001477 ORTHO05D001182 7.2e-06 55.8 48 54.2
AUR62006703 Chenopodium quinoa HOM05D001477 ORTHO05D001182 7.2e-06 55.8 56 46.4
AUR62022291 Chenopodium quinoa HOM05D001477 ORTHO05D001182 7.2e-06 55.8 50 48.0
Migut.E00543 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.2e-06 55.8 56 48.2
Migut.E00914 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.2e-06 55.8 227 25.1
Migut.E00915 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.2e-06 55.8 215 27.4
Migut.E01600 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.2e-06 55.8 183 23.5
FAN08G0878 Fragaria x ananassa HOM05D000312 ORTHO05D000221 7.2e-06 55.8 220 27.3
Rhsim08G0230500 Rhododendron simsii HOM05D001477 ORTHO05D001182 7.2e-06 55.8 67 43.3
RcHm_v2.0_Chr5g0049261 Rosa chinensis HOM05D000312 ORTHO05D000221 7.2e-06 55.8 219 26.9
PGSC0003DMG401027561 Solanum tuberosum HOM05D000576 ORTHO05D000368 7.2e-06 55.8 84 38.1
EL10Ac9g21149 Beta vulgaris HOM05D001477 ORTHO05D001182 9.4e-06 55.5 66 40.9
CAN.G635.7 Capsicum annuum HOM05D001477 ORTHO05D001182 9.4e-06 55.5 120 36.7
AUR62016903 Chenopodium quinoa HOM05D001396 ORTHO05D000493 9.4e-06 55.5 218 26.6
MD11G1275600 Malus domestica HOM05D000051 ORTHO05D000015 9.4e-06 55.5 232 27.2
VMungo0251G2380 Vigna mungo HOM05D001243 ORTHO05D000843 9.4e-06 55.5 57 43.9
VMungo0251G3494 Vigna mungo HOM05D001243 ORTHO05D000843 9.4e-06 55.5 57 43.9


User provided reference genes

Program Settings