Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p028460 Quercus lobata HOM05D005847 ORTHO05D007143 7.1e-104 380.6 186 100.0
QL10p008953 Quercus lobata HOM05D005847 ORTHO05D007143 3.5e-26 122.5 126 57.1
Haze_09129 Corylus avellana HOM05D005847 ORTHO05D007143 6.6e-25 118.2 126 54.8
Cfa011951 Carpinus fangiana HOM05D005847 ORTHO05D007143 1.5e-24 117.1 126 54.0
TWI81G0154 Tripterygium wilfordii HOM05D005847 ORTHO05D007143 5.5e-24 115.2 127 54.3
VMungo1127G1163 Vigna mungo HOM05D005847 ORTHO05D007143 7.2e-24 114.8 126 51.6
Psat4g194080 Pisum sativum HOM05D005847 ORTHO05D007143 9.5e-24 114.4 126 52.4
Phvul.011G200000 Phaseolus vulgaris HOM05D005847 ORTHO05D007143 1.2e-23 114.0 140 47.9
Manes.01G053800 Manihot esculenta HOM05D005847 ORTHO05D007143 2.1e-23 113.2 126 52.4
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea HOM05D005847 ORTHO05D007143 2.8e-23 112.8 126 50.8
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea HOM05D005847 ORTHO05D007143 2.8e-23 112.8 126 50.8
CiPaw.11G115200 Carya illinoinensis HOM05D005847 ORTHO05D007143 4.7e-23 112.1 126 50.8
FvH4_5g11440 Fragaria vesca HOM05D005847 ORTHO05D007143 6.1e-23 111.7 126 50.8
FAN08G0147 Fragaria x ananassa HOM05D005847 ORTHO05D007143 6.1e-23 111.7 126 50.8
FAN13G1107 Fragaria x ananassa HOM05D005847 ORTHO05D007143 6.1e-23 111.7 126 50.8
FAN18G1068 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.4e-22 110.5 126 50.0
Glyma.13G191700 Glycine max HOM05D005847 ORTHO05D007143 1.8e-22 110.2 126 50.8
Ca_24013_v3 Cicer arietinum L. HOM05D005847 ORTHO05D007143 2.3e-22 109.8 126 50.0
FAN04G0204 Fragaria x ananassa HOM05D005847 ORTHO05D007143 2.3e-22 109.8 126 50.0
Atru.chr9.1922 Acer truncatum HOM05D005847 ORTHO05D007143 5.2e-22 108.6 126 51.6
Duzib084G0923 Durio zibethinus HOM05D005847 ORTHO05D007143 5.2e-22 108.6 126 50.0
CSS0040838 Camellia sinensis var. sinensis HOM05D005847 ORTHO05D007143 6.8e-22 108.2 127 48.0
Potri.001G086800 Populus trichocarpa HOM05D005847 ORTHO05D007143 6.8e-22 108.2 126 50.0
RcHm_v2.0_Chr7g0186411 Rosa chinensis HOM05D005847 ORTHO05D007143 6.8e-22 108.2 126 49.2
Thecc.03G224700 Theobroma cacao HOM05D005847 ORTHO05D007143 6.8e-22 108.2 126 49.2
Actinidia22190 Actinidia chinensis HOM05D005847 ORTHO05D007143 8.9e-22 107.8 127 48.0
Medtr8g040700 Medicago truncatula HOM05D005847 ORTHO05D007143 1.2e-21 107.5 126 50.0
CANSAT21G1860 Cannabis sativa HOM05D005847 ORTHO05D007143 1.5e-21 107.1 126 50.0
PGR042G1950 Punica granatum HOM05D005847 ORTHO05D007143 1.5e-21 107.1 126 50.8
Lj1g0001744 Lotus japonicus HOM05D005847 ORTHO05D007143 2.0e-21 106.7 126 48.4
MD14G1134800 Malus domestica HOM05D005847 ORTHO05D007143 2.0e-21 106.7 126 50.0
Rhsim02G0249100 Rhododendron simsii HOM05D005847 ORTHO05D007143 2.0e-21 106.7 155 43.2
Nn8g41240 Nelumbo nucifera HOM05D005847 ORTHO05D007143 3.4e-21 105.9 128 45.3
Peaxi162Scf00074g00363 Petunia axillaris HOM05D005847 ORTHO05D007143 3.4e-21 105.9 126 47.6
DCAR_006499 Daucus carota HOM05D005847 ORTHO05D007143 4.4e-21 105.5 127 47.2
Eucgr.E01030 Eucalyptus grandis HOM05D005847 ORTHO05D007143 4.4e-21 105.5 126 49.2
RcHm_v2.0_Chr2g0164461 Rosa chinensis HOM05D005847 ORTHO05D007143 4.4e-21 105.5 126 48.4
Cc08_g16520 Coffea canephora HOM05D005847 ORTHO05D007143 7.5e-21 104.8 127 45.7
Lj2A159T44 Lonicera japonica HOM05D005847 ORTHO05D007143 9.8e-21 104.4 127 47.2
Prupe.5G126500 Prunus persica HOM05D005847 ORTHO05D007143 9.8e-21 104.4 126 49.2
MELO3C005771.2 Cucumis melo HOM05D005847 ORTHO05D007143 1.3e-20 104.0 126 47.6
Lsat_1_v5_gn_6_83620 Lactuca sativa HOM05D005847 ORTHO05D007143 1.3e-20 104.0 126 47.6
Hund18289 Selenicereus undatus HOM05D005847 ORTHO05D007143 1.3e-20 104.0 126 46.8
PGSC0003DMG400012250 Solanum tuberosum HOM05D005847 ORTHO05D007143 1.3e-20 104.0 126 46.8
Ciclev10019764m.g Citrus clementina HOM05D005847 ORTHO05D007143 1.7e-20 103.6 126 50.0
Gohir.D12G239600 Gossypium hirsutum HOM05D005847 ORTHO05D007143 1.7e-20 103.6 126 46.8
Gorai.008G256700 Gossypium raimondii HOM05D005847 ORTHO05D007143 1.7e-20 103.6 126 46.8
Lalb_Chr13g0298981 Lupinus albus HOM05D005847 ORTHO05D007143 1.7e-20 103.6 126 47.6
Nitab4.5_0002728g0010 Nicotiana tabacum HOM05D005847 ORTHO05D007143 1.7e-20 103.6 126 46.8
Gohir.A12G238500 Gossypium hirsutum HOM05D005847 ORTHO05D007143 2.2e-20 103.2 126 46.8
Sed0023920 Sechium edule HOM05D005847 ORTHO05D007143 2.2e-20 103.2 126 48.4
TPR.G8535 Trifolium pratense HOM05D005847 ORTHO05D007143 2.2e-20 103.2 126 47.6
Aa31LG2G1600 Aethionema arabicum HOM05D005847 ORTHO05D007143 2.8e-20 102.8 126 48.4
CsaV3_5G001820 Cucumis sativus L. HOM05D005847 ORTHO05D007143 2.8e-20 102.8 126 47.6
TAR629G2252 Trochodendron aralioides HOM05D005847 ORTHO05D007143 2.8e-20 102.8 128 48.4
CAN.G567.67 Capsicum annuum HOM05D005847 ORTHO05D007143 3.7e-20 102.4 126 46.0
MBI12_g02092_MAGBIO Magnolia biondii HOM05D005847 ORTHO05D007143 3.7e-20 102.4 127 44.1
COL.COLO4_10763 Corchorus olitorius HOM05D005847 ORTHO05D007143 4.9e-20 102.1 152 42.1
Solyc08g082880.4 Solanum lycopersicum HOM05D005847 ORTHO05D007143 4.9e-20 102.1 126 46.0
Sopen08g031110 Solanum pennellii HOM05D005847 ORTHO05D007143 4.9e-20 102.1 126 46.0
MD06G1113800 Malus domestica HOM05D005847 ORTHO05D007143 1.1e-19 100.9 126 47.6
PSO017G1852 Papaver somniferum HOM05D005847 ORTHO05D007143 1.4e-19 100.5 127 46.5
ECA240G1801 Erigeron canadensis HOM05D005847 ORTHO05D007143 2.4e-19 99.8 126 46.0
AT1G64600 Arabidopsis thaliana HOM05D005847 ORTHO05D007143 3.1e-19 99.4 127 48.0
AUR62019890 Chenopodium quinoa HOM05D005847 ORTHO05D007143 3.1e-19 99.4 126 43.7
THA.LOC104809314 Tarenaya hassleriana HOM05D005847 ORTHO05D007143 4.1e-19 99.0 126 45.2
GSVIVG01019613001 Vitis vinifera HOM05D005847 ORTHO05D007143 4.1e-19 99.0 127 46.5
AL2G10160 Arabidopsis lyrata HOM05D005847 ORTHO05D007143 5.4e-19 98.6 127 47.2
Sc01g0010500 Simmondsia chinensis HOM05D005847 ORTHO05D007143 5.4e-19 98.6 126 45.2
AUR62007027 Chenopodium quinoa HOM05D005847 ORTHO05D007143 1.2e-18 97.4 126 46.0
Carub.0002s0014 Capsella rubella HOM05D005847 ORTHO05D007143 7.8e-18 94.7 134 44.0
Migut.E00656 Erythranthe guttata HOM05D005847 ORTHO05D007143 1.0e-17 94.4 127 44.9
Aqoxy3G00691 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 1.3e-17 94.0 128 41.4
Aqoxy5G04298 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 1.7e-17 93.6 128 41.4
EL10Ac5g12470 Beta vulgaris HOM05D005847 ORTHO05D007143 2.9e-17 92.8 126 45.2
BraA09t37102Z Brassica rapa HOM05D005847 ORTHO05D007143 6.6e-17 91.7 134 42.5
BcaB07g31478 Brassica carinata HOM05D005847 ORTHO05D007143 1.1e-16 90.9 134 42.5
Sp2g00130 Schrenkiella parvula HOM05D005847 ORTHO05D007143 1.1e-16 90.9 134 42.5
Thhalv10023366m.g Eutrema salsugineum HOM05D005847 ORTHO05D007143 1.5e-16 90.5 135 42.2
Oeu058016.1 Olea europaea HOM05D005847 ORTHO05D007143 1.9e-16 90.1 73 60.3
BcaC04g22588 Brassica carinata HOM05D005847 ORTHO05D007143 2.5e-16 89.7 134 41.8
A09p14540 Brassica napus HOM05D005847 ORTHO05D007143 2.5e-16 89.7 134 41.8
C09p17640 Brassica napus HOM05D005847 ORTHO05D007143 2.5e-16 89.7 134 41.8
BolC9t54656H Brassica oleracea HOM05D005847 ORTHO05D007143 2.5e-16 89.7 134 41.8
CDE04G1283 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 2.5e-16 89.7 74 58.1
Zm00001eb021260 Zea mays HOM05D005847 ORTHO05D007143 4.3e-16 89.0 127 40.2
Os07g0297300 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 7.3e-16 88.2 127 40.9
ClCG01G001660 Citrullus lanatus HOM05D005847 ORTHO05D007143 1.6e-15 87.0 166 38.0
Nn1g00324 Nelumbo nucifera HOM05D005847 ORTHO05D007143 1.6e-15 87.0 70 55.7
HanXRQChr13g0415001 Helianthus annuus HOM05D005847 ORTHO05D007143 6.1e-15 85.1 130 39.2
Sabra01G0063100 Salix brachista HOM05D005847 ORTHO05D007143 2.3e-14 83.2 72 58.3
MSTRG.26906 Avicennia marina HOM05D005847 ORTHO05D007143 3.1e-14 82.8 73 56.2
SGA_v2.0_scaffold159G37696 Striga asiatica HOM05D005847 ORTHO05D007143 6.8e-14 81.6 82 52.4
vmacro11522 Vaccinium macrocarpon HOM05D005847 ORTHO05D007143 6.8e-14 81.6 166 35.5
Aqoxy5G04303 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 8.9e-14 81.3 124 39.5
HPP92_003273 Vanilla planifolia HOM05D005847 ORTHO05D007143 8.9e-14 81.3 127 37.0
ATR0757G021 Amborella trichopoda HOM05D005847 ORTHO05D007143 1.3e-12 77.4 127 37.0
unitig_21.g20386 Utricularia gibba HOM05D005847 ORTHO05D007143 2.2e-12 76.6 68 52.9
Pp3c9_6890 Physcomitrium patens HOM05D005847 ORTHO05D007143 9.2e-11 71.2 127 30.7
Mapoly0031s0174 Marchantia polymorpha HOM05D005847 ORTHO05D007143 2.0e-10 70.1 127 33.9
AagrBONN_evm.TU.Sc2ySwM_228.3279 Anthoceros agrestis HOM05D005847 ORTHO05D007143 1.1e-06 57.8 120 28.3


User provided reference genes

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