Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p027997 Quercus lobata HOM05D004525 ORTHO05D005295 9.1e-99 363.6 190 100.0
QL12p036922 Quercus lobata HOM05D004525 ORTHO05D005295 1.9e-96 355.9 190 96.8
Haze_04010 Corylus avellana HOM05D004525 ORTHO05D005295 2.0e-85 319.3 185 89.7
Cfa006748 Carpinus fangiana HOM05D004525 ORTHO05D005295 3.4e-85 318.5 185 89.7
Cfa011920 Carpinus fangiana HOM05D004525 ORTHO05D005295 6.4e-84 314.3 186 89.2
CiPaw.11G112000 Carya illinoinensis HOM05D004525 ORTHO05D005295 6.0e-82 307.8 190 84.7
Duzib068G1021 Durio zibethinus HOM05D004525 ORTHO05D005295 6.6e-81 304.3 191 83.2
CiPaw.12G077100 Carya illinoinensis HOM05D004525 ORTHO05D005295 8.6e-81 303.9 190 83.2
Thecc.03G220900 Theobroma cacao HOM05D004525 ORTHO05D005295 8.6e-81 303.9 191 83.8
Gohir.A12G240200 Gossypium hirsutum HOM05D004525 ORTHO05D005295 1.5e-80 303.1 190 81.1
Potri.001G083801 Populus trichocarpa HOM05D004525 ORTHO05D005295 2.5e-80 302.4 191 83.2
Duzib205G1187 Durio zibethinus HOM05D004525 ORTHO05D005295 1.2e-79 300.1 178 85.4
FvH4_4g11450 Fragaria vesca HOM05D004525 ORTHO05D005295 2.8e-79 298.9 189 81.0
MD14G1136300 Malus domestica HOM05D004525 ORTHO05D005295 4.7e-79 298.1 191 81.7
FAN07G0034 Fragaria x ananassa HOM05D004525 ORTHO05D005295 6.2e-79 297.7 189 80.4
MD06G1119500 Malus domestica HOM05D004525 ORTHO05D005295 1.1e-78 297.0 190 80.5
Gorai.008G258800 Gossypium raimondii HOM05D004525 ORTHO05D005295 1.4e-78 296.6 190 79.5
Sabra01G0060700 Salix brachista HOM05D004525 ORTHO05D005295 1.8e-78 296.2 189 82.0
Atru.chr9.1879 Acer truncatum HOM05D004525 ORTHO05D005295 2.3e-78 295.8 191 80.6
Manes.09G101000 Manihot esculenta HOM05D004525 ORTHO05D005295 3.1e-78 295.4 190 82.1
Gohir.D12G241500 Gossypium hirsutum HOM05D004525 ORTHO05D005295 4.0e-78 295.0 190 78.9
Ciclev10022441m.g Citrus clementina HOM05D004525 ORTHO05D005295 5.2e-78 294.7 183 83.1
COL.COLO4_10799 Corchorus olitorius HOM05D004525 ORTHO05D005295 5.2e-78 294.7 189 80.4
Prupe.2G307200 Prunus persica HOM05D004525 ORTHO05D005295 1.2e-77 293.5 189 80.4
Prupe.5G130000 Prunus persica HOM05D004525 ORTHO05D005295 2.0e-77 292.7 189 78.8
RcHm_v2.0_Chr1g0332661 Rosa chinensis HOM05D004525 ORTHO05D005295 2.0e-77 292.7 189 79.4
Cpa.g.sc27.182 Carica papaya HOM05D004525 ORTHO05D005295 3.4e-77 292.0 191 80.1
GSVIVG01019654001 Vitis vinifera HOM05D004525 ORTHO05D005295 1.7e-76 289.7 194 78.4
Dinv38179 Davidia involucrata HOM05D004525 ORTHO05D005295 3.7e-76 288.5 174 85.6
Potri.003G146900 Populus trichocarpa HOM05D004525 ORTHO05D005295 6.4e-76 287.7 189 80.4
RcHm_v2.0_Chr6g0273561 Rosa chinensis HOM05D004525 ORTHO05D005295 8.3e-76 287.3 189 77.8
THA.LOC104809303 Tarenaya hassleriana HOM05D004525 ORTHO05D005295 8.3e-76 287.3 188 79.3
Haze_09177 Corylus avellana HOM05D004525 ORTHO05D005295 1.9e-75 286.2 173 87.3
FAN22G0758 Fragaria x ananassa HOM05D004525 ORTHO05D005295 2.4e-75 285.8 190 78.4
Sabra03G0106900 Salix brachista HOM05D004525 ORTHO05D005295 5.4e-75 284.6 189 78.8
TWI56G0194 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 9.2e-75 283.9 190 77.4
PGR031G2275 Punica granatum HOM05D004525 ORTHO05D005295 1.0e-73 280.4 191 78.5
Sed0024458 Sechium edule HOM05D004525 ORTHO05D005295 1.3e-73 280.0 191 78.5
Lsat_1_v5_gn_3_14420 Lactuca sativa HOM05D004525 ORTHO05D005295 2.3e-73 279.3 198 73.7
Phvul.003G069600 Phaseolus vulgaris HOM05D004525 ORTHO05D005295 1.1e-72 276.9 191 77.0
Ca_02991_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 3.3e-72 275.4 190 76.3
Actinidia22207 Actinidia chinensis HOM05D004525 ORTHO05D005295 4.3e-72 275.0 194 74.2
Ca_17957_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 5.6e-72 274.6 190 75.8
ClCG10G000810 Citrullus lanatus HOM05D004525 ORTHO05D005295 5.6e-72 274.6 189 77.8
SGA_v2.0_scaffold14G07039 Striga asiatica HOM05D004525 ORTHO05D005295 9.5e-72 273.9 198 71.7
SGA_v2.0_scaffold36G14274 Striga asiatica HOM05D004525 ORTHO05D005295 9.5e-72 273.9 198 71.7
HanXRQChr17g0534221 Helianthus annuus HOM05D004525 ORTHO05D005295 1.2e-71 273.5 195 74.4
CsaV3_3G000870 Cucumis sativus L. HOM05D004525 ORTHO05D005295 1.6e-71 273.1 190 77.4
Glyma.08G296500 Glycine max HOM05D004525 ORTHO05D005295 2.1e-71 272.7 191 75.4
VMungo0251G0643 Vigna mungo HOM05D004525 ORTHO05D005295 2.1e-71 272.7 192 76.0
TWI36G0523 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 3.6e-71 271.9 171 80.7
Nn3g18812 Nelumbo nucifera HOM05D004525 ORTHO05D005295 1.4e-70 270.0 189 75.7
Rhsim07G0078000 Rhododendron simsii HOM05D004525 ORTHO05D005295 1.8e-70 269.6 194 73.7
Cc08_g16770 Coffea canephora HOM05D004525 ORTHO05D005295 2.3e-70 269.2 164 82.3
Thhalv10008848m.g Eutrema salsugineum HOM05D004525 ORTHO05D005295 2.3e-70 269.2 193 74.6
Hma1.2p1_0456F.1_g156630 Hydrangea macrophylla HOM05D004525 ORTHO05D005295 3.1e-70 268.9 153 88.2
MBI04_g25309_MAGBIO Magnolia biondii HOM05D004525 ORTHO05D005295 3.1e-70 268.9 189 74.6
TAR629G2664 Trochodendron aralioides HOM05D004525 ORTHO05D005295 3.1e-70 268.9 189 76.7
Eucgr.C04229 Eucalyptus grandis HOM05D004525 ORTHO05D005295 6.8e-70 267.7 189 73.5
BcaC06g35131 Brassica carinata HOM05D004525 ORTHO05D005295 8.9e-70 267.3 191 74.9
AL1G39060 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 1.2e-69 266.9 190 73.2
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.5e-69 266.5 191 74.3
Nitab4.5_0001367g0040 Nicotiana tabacum HOM05D004525 ORTHO05D005295 2.0e-69 266.2 202 70.8
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 2.6e-69 265.8 191 74.3
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 2.6e-69 265.8 190 73.2
Aa31LG9G260 Aethionema arabicum HOM05D004525 ORTHO05D005295 4.4e-69 265.0 208 69.2
CSS0029651 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 4.4e-69 265.0 190 75.3
ECA246G3328 Erigeron canadensis HOM05D004525 ORTHO05D005295 4.4e-69 265.0 157 82.8
Solyc08g065160.3 Solanum lycopersicum HOM05D004525 ORTHO05D005295 7.6e-69 264.2 202 70.3
Sopen08g018760 Solanum pennellii HOM05D004525 ORTHO05D005295 7.6e-69 264.2 202 70.3
CSS0036474 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 9.9e-69 263.8 190 75.3
Nitab4.5_0012632g0010 Nicotiana tabacum HOM05D004525 ORTHO05D005295 9.9e-69 263.8 202 70.3
Aqoxy3G00526 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 1.3e-68 263.5 190 74.7
Aqoxy5G04330 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 1.3e-68 263.5 190 74.7
AT1G26665 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 1.3e-68 263.5 191 73.3
PGSC0003DMG400029951 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.3e-68 263.5 203 70.4
BcaB03g14082 Brassica carinata HOM05D004525 ORTHO05D005295 1.7e-68 263.1 193 73.6
SalBow6G4763 Salvia bowleyana HOM05D004525 ORTHO05D005295 1.7e-68 263.1 199 68.8
DCAR_011870 Daucus carota HOM05D004525 ORTHO05D005295 2.2e-68 262.7 177 77.4
CSS0049671 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 2.9e-68 262.3 190 74.7
Migut.E00628 Erythranthe guttata HOM05D004525 ORTHO05D005295 2.9e-68 262.3 206 68.4
CANSAT56G2042 Cannabis sativa HOM05D004525 ORTHO05D005295 8.4e-68 260.8 210 71.0
Sp1g22150 Schrenkiella parvula HOM05D004525 ORTHO05D005295 8.4e-68 260.8 195 72.3
Glyma.18G125700 Glycine max HOM05D004525 ORTHO05D005295 1.1e-67 260.4 191 73.8
Lalb_Chr12g0205381 Lupinus albus HOM05D004525 ORTHO05D005295 1.1e-67 260.4 190 70.5
Lalb_Chr13g0294931 Lupinus albus HOM05D004525 ORTHO05D005295 1.4e-67 260.0 190 71.6
MSTRG.24865 Avicennia marina HOM05D004525 ORTHO05D005295 3.2e-67 258.8 201 68.7
EL10Ac5g12425 Beta vulgaris HOM05D004525 ORTHO05D005295 1.2e-66 256.9 196 70.4
TPR.G15828 Trifolium pratense HOM05D004525 ORTHO05D005295 1.2e-66 256.9 190 72.6
Psat7g073160 Pisum sativum HOM05D004525 ORTHO05D005295 1.6e-66 256.5 190 72.1
DCAR_006547 Daucus carota HOM05D004525 ORTHO05D005295 2.1e-66 256.1 180 75.0
unitig_744.g24303 Utricularia gibba HOM05D004525 ORTHO05D005295 2.7e-66 255.8 193 69.9
PSO017G1681 Papaver somniferum HOM05D004525 ORTHO05D005295 4.6e-66 255.0 189 70.4
Sc01g0010720 Simmondsia chinensis HOM05D004525 ORTHO05D005295 1.0e-65 253.8 200 68.5
MSTRG.12201 Avicennia marina HOM05D004525 ORTHO05D005295 1.3e-65 253.4 199 68.3
Medtr8g085570 Medicago truncatula HOM05D004525 ORTHO05D005295 1.3e-65 253.4 190 70.5
vmacro11499 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 1.7e-65 253.1 170 77.1
PSO478G2085 Papaver somniferum HOM05D004525 ORTHO05D005295 3.0e-65 252.3 189 69.8
CARHR212640 Cardamine hirsuta HOM05D004525 ORTHO05D005295 6.6e-65 251.1 190 71.6
Carub.0001s2436 Capsella rubella HOM05D004525 ORTHO05D005295 7.3e-64 247.7 193 67.9
Lj8A200T57 Lonicera japonica HOM05D004525 ORTHO05D005295 9.6e-64 247.3 152 80.9
CARHR025300 Cardamine hirsuta HOM05D004525 ORTHO05D005295 2.1e-63 246.1 191 68.6
AL7G47302 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 4.7e-63 245.0 171 74.9
ATR0620G086 Amborella trichopoda HOM05D004525 ORTHO05D005295 6.2e-63 244.6 168 73.8
vmacro13851 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 6.2e-63 244.6 193 68.4
Zm00001eb103320 Zea mays HOM05D004525 ORTHO05D005295 8.1e-63 244.2 186 70.4
Hund11348 Selenicereus undatus HOM05D004525 ORTHO05D005295 1.4e-62 243.4 156 76.9
Psat7g073280 Pisum sativum HOM05D004525 ORTHO05D005295 2.4e-62 242.7 168 75.6
HPP92_025871 Vanilla planifolia HOM05D004525 ORTHO05D005295 4.0e-62 241.9 199 64.8
Zm00001eb319380 Zea mays HOM05D004525 ORTHO05D005295 1.5e-61 240.0 189 68.3
FAN17G2704 Fragaria x ananassa HOM05D004525 ORTHO05D005295 2.0e-61 239.6 195 68.7
TPR.G11962 Trifolium pratense HOM05D004525 ORTHO05D005295 2.0e-61 239.6 190 68.9
Lj4g0018067 Lotus japonicus HOM05D004525 ORTHO05D005295 2.6e-61 239.2 193 67.4
AT5G41910 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 7.6e-61 237.7 191 69.1
Os09g0528300 Oryza sativa ssp. japonica HOM05D004525 ORTHO05D005295 1.3e-60 236.9 158 76.6
unitig_21.g20890 Utricularia gibba HOM05D004525 ORTHO05D005295 1.7e-60 236.5 199 65.3
Atru.chr3.1913 Acer truncatum HOM05D004525 ORTHO05D005295 2.9e-60 235.7 170 74.1
AUR62007057 Chenopodium quinoa HOM05D004525 ORTHO05D005295 2.9e-60 235.7 190 67.4
Ah.12g053230 Amaranthus hybridus HOM05D004525 ORTHO05D005295 4.9e-60 235.0 157 74.5
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 8.4e-60 234.2 170 74.1
Lj4g0019040 Lotus japonicus HOM05D004525 ORTHO05D005295 1.4e-59 233.4 168 72.6
Oeu022035.1 Olea europaea HOM05D004525 ORTHO05D005295 2.4e-59 232.6 258 55.8
CDE07G1557 Ceratophyllum demersum HOM05D004525 ORTHO05D005295 1.3e-57 226.9 163 70.6
Cfa007058 Carpinus fangiana HOM05D004525 ORTHO05D005295 4.8e-55 218.4 135 85.2
BraA09t39504Z Brassica rapa HOM05D004525 ORTHO05D005295 1.1e-54 217.2 192 63.0
Peaxi162Scf01444g00013 Petunia axillaris HOM05D004525 ORTHO05D005295 9.0e-54 214.2 181 65.2
FAN08G2166 Fragaria x ananassa HOM05D000319 ORTHO05D035382 2.6e-53 212.6 152 70.4
arahy.Tifrunner.gnm1.ann1.0LH6ZS Arachis hypogaea HOM05D004525 ORTHO05D005295 4.4e-53 211.8 191 63.4
arahy.Tifrunner.gnm1.ann1.DJD4V2 Arachis hypogaea HOM05D004525 ORTHO05D005295 9.9e-53 210.7 191 62.8
Psat7g074000 Pisum sativum HOM05D004525 ORTHO05D005295 1.4e-51 206.8 170 66.5
C05p24330 Brassica napus HOM05D004525 ORTHO05D005295 2.3e-49 199.5 149 72.5
Psat7g072880 Pisum sativum HOM05D004525 ORTHO05D005295 4.3e-48 195.3 149 66.4
MELO3C013773.2 Cucumis melo HOM05D004525 ORTHO05D005295 9.6e-48 194.1 233 53.6
FvH4_5g19692 Fragaria vesca HOM05D004525 ORTHO05D005295 4.0e-46 188.7 164 63.4
Peaxi162Scf00640g00032 Petunia axillaris HOM05D004525 ORTHO05D005295 5.5e-43 178.3 132 67.4
AUR62019920 Chenopodium quinoa HOM05D004525 ORTHO05D005295 1.2e-42 177.2 109 77.1
Nitab4.5_0017193g0030 Nicotiana tabacum HOM05D004525 ORTHO05D005295 2.1e-42 176.4 178 57.9
TAR375G0036 Trochodendron aralioides HOM05D004525 ORTHO05D005295 3.0e-41 172.6 104 78.8
Actinidia27285 Actinidia chinensis HOM05D004525 ORTHO05D005295 7.4e-40 167.9 182 52.7
Mapoly0151s0039 Marchantia polymorpha HOM05D004525 ORTHO05D005295 8.1e-39 164.5 156 52.6
Pp3c11_16910 Physcomitrium patens HOM05D004525 ORTHO05D005295 4.5e-37 158.7 160 48.8
PGSC0003DMG400040735 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.3e-36 157.1 131 64.1
PGSC0003DMG400039131 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.7e-36 156.8 130 60.8
PGSC0003DMG400043501 Solanum tuberosum HOM05D004525 ORTHO05D005295 6.5e-36 154.8 131 62.6
PGSC0003DMG400008601 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.4e-35 153.7 131 62.6
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 5.5e-35 151.8 132 59.1
PGSC0003DMG400017120 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.2e-34 150.6 131 63.4
CAN.G6.3 Capsicum annuum HOM05D004525 ORTHO05D005295 4.6e-34 148.7 82 84.1
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 1.0e-33 147.5 112 69.6
SMO301G0053 Selaginella moellendorffii HOM05D004525 ORTHO05D005295 5.1e-33 145.2 156 50.6
AagrBONN_evm.TU.Sc2ySwM_117.1849 Anthoceros agrestis HOM05D004525 ORTHO05D005295 7.4e-32 141.4 144 47.9
AagrBONN_evm.TU.Sc2ySwM_368.381 Anthoceros agrestis HOM05D004525 ORTHO05D005295 8.2e-31 137.9 172 41.9
SEGI_32557 Sequoiadendron giganteum HOM05D004525 ORTHO05D005295 2.4e-30 136.3 137 53.3
RcHm_v2.0_Chr7g0187021 Rosa chinensis HOM05D004525 ORTHO05D005295 2.1e-26 123.2 174 43.1
Nitab4.5_0002724g0080 Nicotiana tabacum HOM05D004525 ORTHO05D005295 1.3e-23 114.0 111 59.5
CAN.G1631.10 Capsicum annuum HOM05D004525 ORTHO05D005295 8.5e-20 101.3 87 64.4
RcHm_v2.0_Chr5g0055281 Rosa chinensis HOM05D004525 ORTHO05D005295 3.7e-15 85.9 57 73.7
SGA_v2.0_scaffold104G30259 Striga asiatica HOM05D004525 ORTHO05D005295 7.7e-13 78.2 180 37.8
BcaB05g21931 Brassica carinata HOM05D004525 ORTHO05D005295 1.9e-11 73.6 80 62.5
TAR374G0495 Trochodendron aralioides HOM05D004525 ORTHO05D005295 2.1e-10 70.1 105 46.7
Cre12.g556450 Chlamydomonas reinhardtii HOM05D004525 ORTHO05D005295 7.0e-06 55.1 142 27.5


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