Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p027330 Quercus lobata HOM05D008304 ORTHO05D004056 6.1e-36 153.7 80 100.0
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 1.9e-21 105.5 83 75.9
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 7.2e-21 103.6 83 75.9
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 1.8e-19 99.0 85 72.9
GSVIVG01019681001 Vitis vinifera HOM05D008304 ORTHO05D004056 6.7e-19 97.1 82 70.7
Manes.01G055200 Manihot esculenta HOM05D008304 ORTHO05D004056 2.6e-18 95.1 80 70.0
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 5.7e-18 94.0 80 68.8
CSS0003921 Camellia sinensis var. sinensis HOM05D008304 ORTHO05D004056 5.3e-16 87.4 88 63.6
ClCG01G001410 Citrullus lanatus HOM05D008304 ORTHO05D004056 2.0e-15 85.5 82 61.0
Nitab4.5_0002520g0050 Nicotiana tabacum HOM05D008304 ORTHO05D004056 2.0e-15 85.5 87 63.2
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 3.5e-15 84.7 80 62.5
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 1.0e-14 83.2 80 63.8
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 2.2e-14 82.0 87 63.2
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 6.5e-14 80.5 80 65.0
COL.COLO4_10829 Corchorus olitorius HOM05D008304 ORTHO05D004056 8.5e-14 80.1 81 66.7
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 1.1e-13 79.7 80 63.8
Dinv18759 Davidia involucrata HOM05D008304 ORTHO05D004056 1.1e-13 79.7 94 57.4
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 1.9e-13 79.0 85 61.2
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 1.9e-13 79.0 80 63.8
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 4.2e-13 77.8 80 63.8
Oeu042857.1 Olea europaea HOM05D008304 ORTHO05D004056 5.5e-13 77.4 80 62.5
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 7.2e-13 77.0 80 63.8
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 7.2e-13 77.0 80 60.0
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 9.4e-13 76.6 80 62.5
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 9.4e-13 76.6 80 57.5
vmacro11488 Vaccinium macrocarpon HOM05D008304 ORTHO05D004056 2.7e-12 75.1 88 61.4
Cc08_g16980 Coffea canephora HOM05D008304 ORTHO05D004056 1.8e-11 72.4 89 57.3
Migut.E00724 Erythranthe guttata HOM05D008304 ORTHO05D004056 1.8e-11 72.4 80 53.8
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 3.0e-11 71.6 80 62.5
Gohir.D09G182600 Gossypium hirsutum HOM05D008304 ORTHO05D004056 3.0e-11 71.6 80 58.8
Gorai.006G204900 Gossypium raimondii HOM05D008304 ORTHO05D004056 3.0e-11 71.6 80 58.8
Eucgr.D01660 Eucalyptus grandis HOM05D008304 ORTHO05D004056 4.0e-11 71.2 77 57.1
Gohir.A09G187800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 5.2e-11 70.9 80 58.8
Sabra16G0303400 Salix brachista HOM05D008304 ORTHO05D004056 5.2e-11 70.9 80 61.2
CsaV3_5G001550 Cucumis sativus L. HOM05D008304 ORTHO05D004056 8.8e-11 70.1 79 54.4
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 2.0e-10 68.9 80 57.5
Oeu015753.1 Olea europaea HOM05D008304 ORTHO05D004056 2.6e-10 68.6 80 57.5
Potri.001G449633 Populus trichocarpa HOM05D008304 ORTHO05D004056 5.7e-10 67.4 80 58.8
Peaxi162Scf00074g00131 Petunia axillaris HOM05D008304 ORTHO05D004056 9.7e-10 66.6 81 53.1
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 3.7e-09 64.7 80 56.2
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.7e-09 64.7 80 56.2
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.7e-09 64.7 80 56.2
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.7e-09 64.7 80 56.2
MBI04_g22063_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 8.2e-09 63.5 80 56.2
Sabra11G0136700 Salix brachista HOM05D008304 ORTHO05D004056 1.1e-08 63.2 80 52.5
Sabra11G0148600 Salix brachista HOM05D008304 ORTHO05D004056 1.1e-08 63.2 80 52.5
PGR042G2542 Punica granatum HOM05D008304 ORTHO05D004056 2.4e-08 62.0 83 49.4
Ciclev10023139m.g Citrus clementina HOM05D008304 ORTHO05D004056 3.1e-08 61.6 80 55.0
Nn1g00437 Nelumbo nucifera HOM05D008304 ORTHO05D004056 9.1e-08 60.1 80 48.8
Potri.011G151900 Populus trichocarpa HOM05D008304 ORTHO05D004056 9.1e-08 60.1 80 52.5
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 1.6e-07 59.3 81 54.3
MBI12_g20132_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 2.0e-07 58.9 83 51.8
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 4.5e-07 57.8 84 48.8
ECA233G3589 Erigeron canadensis HOM05D000020 ORTHO05D000543 4.5e-07 57.8 76 51.3
CAN.G567.106 Capsicum annuum HOM05D008304 ORTHO05D004056 5.9e-07 57.4 76 55.3
RcHm_v2.0_Chr7g0187581 Rosa chinensis HOM05D008304 ORTHO05D004056 5.9e-07 57.4 30 83.3
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.3e-06 56.2 81 49.4
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 1.3e-06 56.2 77 49.4
HanXRQChr07g0192251 Helianthus annuus HOM05D010428 ORTHO05D012179 1.7e-06 55.8 77 51.9
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 5.0e-06 54.3 81 48.1
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 6.5e-06 53.9 81 46.9
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 6.5e-06 53.9 80 47.5
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 6.5e-06 53.9 80 47.5
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 6.5e-06 53.9 73 52.1
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 6.5e-06 53.9 73 52.1


User provided reference genes

Program Settings