Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p027097 Quercus lobata HOM05D013249 ORTHO05D011012 0.0e+00 1714.9 856 100.0
Haze_09217 Corylus avellana HOM05D013249 ORTHO05D011012 3.8e-253 878.6 920 56.7
CiPaw.12G074500 Carya illinoinensis HOM05D011672 ORTHO05D011012 6.9e-138 495.7 652 48.9
Prupe.5G135100 Prunus persica HOM05D013249 ORTHO05D011012 5.7e-108 396.4 864 36.8
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 2.8e-102 377.5 912 34.2
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 6.6e-88 329.7 890 32.1
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.5e-87 328.6 911 33.2
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 1.6e-86 325.1 588 36.6
RcHm_v2.0_Chr7g0187831 Rosa chinensis HOM05D013249 ORTHO05D011012 5.2e-85 320.1 751 34.6
FAN13G1375 Fragaria x ananassa HOM05D013249 ORTHO05D011012 2.0e-76 291.6 693 33.8
FAN08G0662 Fragaria x ananassa HOM05D013249 ORTHO05D011012 3.2e-74 284.3 715 33.4
MD06G1124500 Malus domestica HOM05D013249 ORTHO05D011012 5.4e-74 283.5 547 37.8
FvH4_5g10390 Fragaria vesca HOM05D013249 ORTHO05D011012 7.8e-73 279.6 730 33.2
FAN04G0229 Fragaria x ananassa HOM05D013249 ORTHO05D011012 1.5e-71 275.4 713 32.4
FAN18G3072 Fragaria x ananassa HOM05D013249 ORTHO05D011012 8.1e-70 269.6 741 32.5
Potri.011G149601 Populus trichocarpa HOM05D011672 ORTHO05D011012 1.1e-69 269.2 550 35.6
TAR629G2606 Trochodendron aralioides HOM05D006657 ORTHO05D005964 3.3e-63 247.7 653 32.3
Duzib068G0278 Durio zibethinus HOM05D011672 ORTHO05D011012 1.6e-62 245.4 885 29.8
Sabra11G0134500 Salix brachista HOM05D011672 ORTHO05D011012 9.0e-61 239.6 536 33.8
Thecc.03G215600 Theobroma cacao HOM05D011672 ORTHO05D011012 2.6e-60 238.0 876 29.8
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 4.6e-57 227.3 788 28.8
TWI81G0792 Tripterygium wilfordii HOM05D011672 ORTHO05D011012 2.2e-51 208.4 660 29.7
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 5.5e-50 203.8 959 27.6
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 5.5e-50 203.8 921 28.3
Duzib084G0474 Durio zibethinus HOM05D011672 ORTHO05D011012 1.6e-49 202.2 755 28.5
Lj6g0008807 Lotus japonicus HOM05D013241 ORTHO05D011012 9.6e-47 193.0 423 34.0
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 8.2e-46 189.9 926 26.3
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 4.0e-45 187.6 932 27.3
VMungo0540G2099 Vigna mungo HOM05D013241 ORTHO05D011012 1.5e-44 185.7 423 32.9
Glyma.13G227600 Glycine max HOM05D013241 ORTHO05D011012 2.6e-44 184.9 413 34.1
Eucgr.L00346 Eucalyptus grandis HOM05D013249 ORTHO05D011012 5.8e-44 183.7 874 27.8
Phvul.006G174000 Phaseolus vulgaris HOM05D013241 ORTHO05D011012 5.8e-44 183.7 411 35.0
Lalb_Chr18g0054711 Lupinus albus HOM05D013241 ORTHO05D011012 5.5e-42 177.2 407 33.7
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 1.2e-41 176.0 915 25.6
TPR.G4557 Trifolium pratense HOM05D013241 ORTHO05D011012 2.4e-37 161.8 421 29.2
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 1.2e-36 159.5 916 25.9
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 3.4e-36 157.9 900 25.4
arahy.Tifrunner.gnm1.ann1.69Z0CE Arachis hypogaea HOM05D013241 ORTHO05D011012 7.7e-36 156.8 469 29.2
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 1.0e-35 156.4 919 25.0
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 1.0e-35 156.4 753 25.6
arahy.Tifrunner.gnm1.ann1.62N0H4 Arachis hypogaea HOM05D000074 ORTHO05D011012 1.7e-35 155.6 468 29.3
Ca_00458_v3 Cicer arietinum L. HOM05D013241 ORTHO05D011012 6.5e-35 153.7 577 27.9
Medtr2g016640 Medicago truncatula HOM05D013241 ORTHO05D011012 2.7e-33 148.3 413 30.3
Gorai.008G261200 Gossypium raimondii HOM05D011672 ORTHO05D011012 6.1e-33 147.1 619 27.0
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 5.1e-32 144.1 825 24.5
COL.COLO4_10845 Corchorus olitorius HOM05D011672 ORTHO05D011012 1.5e-31 142.5 383 31.3
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 2.0e-31 142.1 708 25.0
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 2.5e-31 141.7 741 25.9
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 6.3e-30 137.1 757 24.6
Cpa.g.sc37.109 Carica papaya HOM05D011672 ORTHO05D012736 8.2e-30 136.7 700 24.7
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.4e-29 136.0 815 25.0
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 1.8e-29 135.6 900 25.0
Gohir.D12G243700 Gossypium hirsutum HOM05D011672 ORTHO05D011012 6.9e-29 133.7 586 26.6
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 5.9e-28 130.6 598 26.4
Gohir.A12G242700 Gossypium hirsutum HOM05D011672 ORTHO05D011012 2.2e-27 128.6 604 25.7
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 2.9e-27 128.3 915 23.9
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 6.5e-27 127.1 783 23.6
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 3.2e-26 124.8 879 24.1
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 4.2e-26 124.4 924 24.6
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 2.7e-25 121.7 899 23.8
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 1.4e-24 119.4 909 24.1
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 2.0e-23 115.5 853 24.2
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 5.7e-23 114.0 549 24.6
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 4.8e-22 110.9 901 23.9
Psat1g195680 Pisum sativum HOM05D013241 ORTHO05D011012 2.4e-21 108.6 477 28.3
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 2.4e-21 108.6 765 24.4
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 3.1e-21 108.2 521 25.1
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 7.0e-21 107.1 900 26.0
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 9.1e-21 106.7 828 22.8
Atru.chr9.1832 Acer truncatum HOM05D011672 ORTHO05D011012 2.0e-20 105.5 133 43.6
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 4.5e-20 104.4 917 24.3
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 4.5e-20 104.4 781 23.7
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 5.9e-20 104.0 743 24.8
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 7.7e-20 103.6 891 22.8
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 2.2e-19 102.1 743 23.8
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 2.9e-19 101.7 869 22.1
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 8.5e-19 100.1 916 23.9
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 8.5e-19 100.1 644 24.7
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 5.5e-18 97.4 922 23.5
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 7.2e-18 97.1 883 21.9
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 1.2e-17 96.3 876 24.5
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 1.6e-17 95.9 926 23.1
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 2.7e-17 95.1 882 22.2
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 4.7e-17 94.4 921 23.7
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 6.1e-17 94.0 931 22.7
THA.LOC104815458 Tarenaya hassleriana HOM05D010823 ORTHO05D012736 1.0e-16 93.2 193 36.8
Atru.chr9.1833 Acer truncatum HOM05D011672 ORTHO05D011012 1.8e-16 92.4 163 40.5
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 1.8e-16 92.4 769 23.9
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 2.3e-16 92.0 469 26.2
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 6.7e-16 90.5 932 22.5
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 8.8e-16 90.1 497 25.8
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 2.0e-15 89.0 450 24.2
CARHR256170 Cardamine hirsuta HOM05D010823 ORTHO05D012736 2.6e-15 88.6 410 27.1
PGR031G2170 Punica granatum HOM05D013249 ORTHO05D011012 4.4e-15 87.8 410 24.6
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 5.7e-15 87.4 434 24.4
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 7.4e-15 87.0 443 25.3
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 1.3e-14 86.3 654 23.1
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 1.3e-14 86.3 927 22.9
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 2.2e-14 85.5 896 22.9
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 4.8e-14 84.3 411 24.3
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 8.2e-14 83.6 896 22.9
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 1.1e-13 83.2 492 23.2
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 1.4e-13 82.8 473 24.1
Gohir.A08G105800 Gossypium hirsutum HOM05D006657 ORTHO05D005964 1.8e-13 82.4 669 25.0
TWI23G1261 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 1.8e-13 82.4 681 25.1
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 2.4e-13 82.0 475 22.5
Sp6g06990 Schrenkiella parvula HOM05D010823 ORTHO05D012736 2.4e-13 82.0 522 25.1
PSO170G0737 Papaver somniferum HOM05D006657 ORTHO05D005964 5.3e-13 80.9 726 23.1
Aa31LG9G11580 Aethionema arabicum HOM05D010823 ORTHO05D012736 7.0e-13 80.5 733 23.6
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 1.6e-12 79.3 432 23.4
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.3e-11 76.3 200 29.5
AUR62005972 Chenopodium quinoa HOM05D006657 ORTHO05D005964 2.9e-11 75.1 664 22.6
MBI04_g37612_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 2.9e-11 75.1 414 22.0
BcaB05g23897 Brassica carinata HOM05D010823 ORTHO05D012736 5.0e-11 74.3 481 23.9
DCAR_020382 Daucus carota HOM05D006657 ORTHO05D005964 5.0e-11 74.3 935 20.4
MBI04_g41177_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 8.5e-11 73.6 414 21.7
BolC8t47914H Brassica oleracea HOM05D010823 ORTHO05D012736 1.1e-10 73.2 380 26.3
Oeu029332.2 Olea europaea HOM05D006657 ORTHO05D005964 1.1e-10 73.2 331 24.8
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 1.1e-10 73.2 432 23.4
BcaC07g37571 Brassica carinata HOM05D010823 ORTHO05D012736 1.9e-10 72.4 379 26.4
PSO782G1897 Papaver somniferum HOM05D006657 ORTHO05D005964 2.5e-10 72.0 767 21.9
Aa31LG6G7590 Aethionema arabicum HOM05D010823 ORTHO05D012736 4.2e-10 71.2 358 26.5
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 4.2e-10 71.2 458 22.7
CDE04G2546 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 7.2e-10 70.5 434 25.1
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 9.4e-10 70.1 192 27.6
Sc13g0010540 Simmondsia chinensis HOM05D006657 ORTHO05D005964 1.2e-09 69.7 918 22.9
ATR0579G071 Amborella trichopoda HOM05D006657 ORTHO05D005964 1.6e-09 69.3 229 24.9
CARHR032380 Cardamine hirsuta HOM05D010823 ORTHO05D012736 1.6e-09 69.3 579 22.6
Aqoxy5G04358 Aquilegia oxysepala HOM05D006657 ORTHO05D005964 2.1e-09 68.9 422 25.6
BcaB04g17935 Brassica carinata HOM05D010823 ORTHO05D012736 2.1e-09 68.9 398 24.1
MBI12_g20086_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 2.1e-09 68.9 1008 22.4
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 3.6e-09 68.2 516 23.6
Phvul.009G038600 Phaseolus vulgaris HOM05D006657 ORTHO05D005964 3.6e-09 68.2 190 30.5
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 3.6e-09 68.2 417 23.5
TAR629G3494 Trochodendron aralioides HOM05D006657 ORTHO05D005964 4.7e-09 67.8 70 47.1
Hund23980 Selenicereus undatus HOM05D006657 ORTHO05D005964 2.3e-08 65.5 687 22.7
EL10Ac3g05155 Beta vulgaris HOM05D006657 ORTHO05D005964 3.0e-08 65.1 708 23.7
CDE02G0079 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 3.0e-08 65.1 905 22.4
Eucgr.A00967 Eucalyptus grandis HOM05D006657 ORTHO05D005964 3.0e-08 65.1 335 24.5
AL1G47360 Arabidopsis lyrata HOM05D010823 ORTHO05D012736 4.0e-08 64.7 190 31.6
Thhalv10028483m.g Eutrema salsugineum HOM05D010823 ORTHO05D012736 4.0e-08 64.7 98 36.7
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 5.2e-08 64.3 673 22.3
BraA08t32888Z Brassica rapa HOM05D010823 ORTHO05D012736 6.7e-08 63.9 487 24.4
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 1.2e-07 63.2 503 22.3
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 1.2e-07 63.2 503 22.3
HanXRQChr08g0226001 Helianthus annuus HOM05D006657 ORTHO05D005964 1.5e-07 62.8 251 25.1
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 1.5e-07 62.8 231 26.4
Potri.002G230100 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.5e-07 62.8 74 43.2
Thhalv10006985m.g Eutrema salsugineum HOM05D010823 ORTHO05D012736 4.4e-07 61.2 158 31.0
Potri.003G206701 Populus trichocarpa HOM05D006657 ORTHO05D005964 4.4e-07 61.2 74 43.2
AT1G33050 Arabidopsis thaliana HOM05D010823 ORTHO05D012736 7.5e-07 60.5 204 29.9
THA.LOC104799674 Tarenaya hassleriana HOM05D009821 ORTHO05D005964 7.5e-07 60.5 188 27.7
Carub.0001s3131 Capsella rubella HOM05D010823 ORTHO05D012736 1.3e-06 59.7 182 30.2
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 2.2e-06 58.9 187 26.2
CiPaw.06G040100 Carya illinoinensis HOM05D006657 ORTHO05D005964 2.8e-06 58.5 187 28.9
Aa31LG11G3790 Aethionema arabicum HOM05D009821 ORTHO05D005964 3.7e-06 58.2 180 26.1
AUR62028098 Chenopodium quinoa HOM05D006657 ORTHO05D005964 3.7e-06 58.2 661 20.7
Ah.13g070870 Amaranthus hybridus HOM05D006657 ORTHO05D005964 6.3e-06 57.4 415 24.6
ECA233G2144 Erigeron canadensis HOM05D006657 ORTHO05D005964 6.3e-06 57.4 179 23.5
Potri.004G080501 Populus trichocarpa HOM05D006657 ORTHO05D005964 6.3e-06 57.4 74 41.9


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