Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 9.1e-71 270.0 125 100.0
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 1.7e-40 169.5 125 68.0
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 4.8e-40 167.9 125 64.8
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 4.1e-39 164.9 125 67.2
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 5.4e-39 164.5 125 68.0
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 2.0e-38 162.5 79 91.1
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 3.5e-38 161.8 79 91.1
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 1.3e-37 159.8 126 67.5
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 1.3e-37 159.8 120 66.7
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 2.5e-36 155.6 133 63.2
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 4.2e-36 154.8 82 82.9
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 4.2e-36 154.8 117 66.7
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 9.5e-36 153.7 128 60.9
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 1.6e-35 152.9 96 75.0
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 1.6e-35 152.9 128 59.4
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 2.1e-35 152.5 125 62.4
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 3.6e-35 151.8 96 75.0
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 3.6e-35 151.8 128 61.7
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 3.6e-35 151.8 75 89.3
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 6.1e-35 151.0 122 61.5
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 1.4e-34 149.8 76 85.5
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 2.3e-34 149.1 75 86.7
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 3.0e-34 148.7 88 75.0
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 3.0e-34 148.7 125 57.6
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 4.0e-34 148.3 78 87.2
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 5.2e-34 147.9 75 85.3
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 6.8e-34 147.5 110 66.4
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 8.9e-34 147.1 85 76.5
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 1.2e-33 146.7 125 56.8
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.2e-33 146.7 72 87.5
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.2e-33 146.7 110 66.4
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 1.2e-33 146.7 110 66.4
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.2e-33 146.7 128 60.2
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 1.5e-33 146.4 75 84.0
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.5e-33 146.4 125 56.0
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 2.0e-33 146.0 143 55.2
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 2.6e-33 145.6 75 84.0
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 4.4e-33 144.8 76 80.3
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 5.7e-33 144.4 75 82.7
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 5.7e-33 144.4 75 84.0
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 9.8e-33 143.7 125 56.8
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 2.2e-32 142.5 75 81.3
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 2.8e-32 142.1 124 57.3
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 8.3e-32 140.6 79 81.0
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 1.4e-31 139.8 75 78.7
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 2.7e-30 135.6 126 54.8
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 1.7e-29 132.9 82 74.4
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.1e-28 130.2 62 87.1
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.1e-28 130.2 62 87.1
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 1.5e-28 129.8 68 82.4
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 1.9e-28 129.4 125 57.6
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.9e-28 129.4 73 78.1
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 3.3e-28 128.6 66 80.3
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 3.3e-28 128.6 66 80.3
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 2.1e-27 125.9 85 67.1
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 2.1e-27 125.9 128 53.9
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 2.8e-27 125.6 68 80.9
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 4.0e-26 121.7 85 67.1
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 8.9e-26 120.6 81 69.1
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 2.0e-25 119.4 128 52.3
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 7.5e-25 117.5 126 47.6
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 1.9e-23 112.8 126 50.8
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 2.4e-23 112.5 86 59.3
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 2.0e-22 109.4 126 50.0
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 4.6e-22 108.2 93 60.2
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 1.3e-21 106.7 51 84.3
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 2.1e-19 99.4 61 68.9
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 2.8e-19 99.0 44 95.5
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 4.7e-19 98.2 59 76.3
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 1.8e-18 96.3 99 49.5
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 8.9e-18 94.0 92 58.7
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 2.0e-17 92.8 125 44.8
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.6e-17 92.4 50 88.0
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 5.8e-17 91.3 45 84.4
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 1.3e-16 90.1 79 53.2
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 8.3e-16 87.4 127 46.5
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 2.4e-15 85.9 86 52.3
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 3.2e-15 85.5 85 50.6
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 9.2e-15 84.0 75 53.3
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 1.6e-14 83.2 79 54.4
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 1.1e-10 70.5 48 66.7
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 2.4e-07 59.3 29 79.3


User provided reference genes

Program Settings