Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p025629 Quercus lobata HOM05D001548 ORTHO05D003901 1.5e-56 222.6 113 100.0
QL02p025510 Quercus lobata HOM05D001548 ORTHO05D003901 1.7e-47 192.6 101 95.0
CSS0028646 Camellia sinensis var. sinensis HOM05D001548 ORTHO05D003901 9.1e-46 186.8 101 92.1
CSS0030680 Camellia sinensis var. sinensis HOM05D001548 ORTHO05D003901 9.1e-46 186.8 101 92.1
Cc02_g04510 Coffea canephora HOM05D001548 ORTHO05D003901 3.5e-45 184.9 101 91.1
Hma1.2p1_1132F.1_g260120 Hydrangea macrophylla HOM05D001548 ORTHO05D003901 1.0e-44 183.3 101 90.1
Gohir.A07G042700 Gossypium hirsutum HOM05D001548 ORTHO05D003901 1.3e-44 183.0 101 89.1
CiPaw.07G056100 Carya illinoinensis HOM05D001548 ORTHO05D003901 2.2e-44 182.2 101 91.1
Gorai.001G050100 Gossypium raimondii HOM05D001548 ORTHO05D003901 5.0e-44 181.0 101 88.1
CiPaw.07G237100 Carya illinoinensis HOM05D001548 ORTHO05D003901 1.1e-43 179.9 101 89.1
Gohir.D07G047000 Gossypium hirsutum HOM05D001548 ORTHO05D003901 1.5e-43 179.5 101 88.1
Gorai.001G050000 Gossypium raimondii HOM05D001548 ORTHO05D003901 1.5e-43 179.5 101 86.1
Sabra01G0178700 Salix brachista HOM05D001548 ORTHO05D003901 1.5e-43 179.5 101 88.1
Thecc.03G151500 Theobroma cacao HOM05D001548 ORTHO05D003901 1.5e-43 179.5 101 86.1
TAR375G0989 Trochodendron aralioides HOM05D001548 ORTHO05D003901 1.9e-43 179.1 101 87.1
CDE11G0092 Ceratophyllum demersum HOM05D001548 ORTHO05D003901 4.2e-43 177.9 101 87.1
Cfa006297 Carpinus fangiana HOM05D001548 ORTHO05D003901 7.2e-43 177.2 101 87.1
Cfa012920 Carpinus fangiana HOM05D001548 ORTHO05D003901 7.2e-43 177.2 101 87.1
ClCG01G004540 Citrullus lanatus HOM05D001548 ORTHO05D003901 7.2e-43 177.2 101 88.1
Potri.004G233800 Populus trichocarpa HOM05D001548 ORTHO05D003901 9.4e-43 176.8 101 88.1
Ciclev10005123m.g Citrus clementina HOM05D001548 ORTHO05D003901 1.2e-42 176.4 101 86.1
TAR059G0002 Trochodendron aralioides HOM05D001548 ORTHO05D003901 1.2e-42 176.4 101 86.1
Haze_21275 Corylus avellana HOM05D001548 ORTHO05D003901 1.6e-42 176.0 101 86.1
Solyc06g034120.4 Solanum lycopersicum HOM05D001548 ORTHO05D003901 1.6e-42 176.0 101 87.1
PGSC0003DMG400021595 Solanum tuberosum HOM05D001548 ORTHO05D003901 2.1e-42 175.6 101 86.1
COL.COLO4_14078 Corchorus olitorius HOM05D001548 ORTHO05D003901 2.7e-42 175.3 101 86.1
Duzib205G1029 Durio zibethinus HOM05D001548 ORTHO05D003901 2.7e-42 175.3 101 85.1
HanXRQChr05g0142611 Helianthus annuus HOM05D001548 ORTHO05D003901 2.7e-42 175.3 101 85.1
Peaxi162Scf00304g01121 Petunia axillaris HOM05D001548 ORTHO05D003901 3.6e-42 174.9 101 86.1
Nitab4.5_0000262g0070 Nicotiana tabacum HOM05D001548 ORTHO05D003901 4.7e-42 174.5 101 86.1
PSO675G0881 Papaver somniferum HOM05D001548 ORTHO05D003901 4.7e-42 174.5 101 85.1
Sopen06g010780 Solanum pennellii HOM05D001548 ORTHO05D003901 4.7e-42 174.5 101 85.1
GSVIVG01017501001 Vitis vinifera HOM05D001548 ORTHO05D003901 4.7e-42 174.5 101 86.1
Eucgr.A02910 Eucalyptus grandis HOM05D001548 ORTHO05D003901 8.0e-42 173.7 101 86.1
Nitab4.5_0017191g0010 Nicotiana tabacum HOM05D001548 ORTHO05D003901 1.0e-41 173.3 101 85.1
Oeu028188.3 Olea europaea HOM05D001548 ORTHO05D003901 1.0e-41 173.3 101 86.1
Cpa.g.sc13.275 Carica papaya HOM05D001548 ORTHO05D003901 1.4e-41 172.9 101 85.1
CsaV3_5G004760 Cucumis sativus L. HOM05D001548 ORTHO05D003901 1.4e-41 172.9 101 85.1
Sed0016189 Sechium edule HOM05D001548 ORTHO05D003901 1.4e-41 172.9 101 86.1
Dinv16853 Davidia involucrata HOM05D001548 ORTHO05D003901 1.8e-41 172.6 101 87.1
Gohir.A07G042600 Gossypium hirsutum HOM05D001548 ORTHO05D003901 1.8e-41 172.6 101 82.2
Lj8C45T15 Lonicera japonica HOM05D001548 ORTHO05D003901 1.8e-41 172.6 101 83.2
PSO732G0088 Papaver somniferum HOM05D001548 ORTHO05D003901 1.8e-41 172.6 101 84.2
PGR042G0437 Punica granatum HOM05D001548 ORTHO05D003901 2.3e-41 172.2 101 84.2
arahy.Tifrunner.gnm1.ann1.5G5TDX Arachis hypogaea HOM05D001548 ORTHO05D003901 3.0e-41 171.8 101 83.2
arahy.Tifrunner.gnm1.ann1.YE8881 Arachis hypogaea HOM05D001548 ORTHO05D003901 3.0e-41 171.8 101 83.2
MELO3C005482.2 Cucumis melo HOM05D001548 ORTHO05D003901 3.0e-41 171.8 101 86.1
Nn1g00917 Nelumbo nucifera HOM05D001548 ORTHO05D003901 3.0e-41 171.8 101 84.2
Glyma.12G241100 Glycine max HOM05D001548 ORTHO05D003901 4.0e-41 171.4 101 84.2
SalBow3G1454 Salvia bowleyana HOM05D001548 ORTHO05D003901 4.0e-41 171.4 101 84.2
SalBow3G1776 Salvia bowleyana HOM05D001548 ORTHO05D003901 4.0e-41 171.4 101 84.2
Eucgr.A02907 Eucalyptus grandis HOM05D001548 ORTHO05D003901 6.8e-41 170.6 101 84.2
Sc19g0001740 Simmondsia chinensis HOM05D001548 ORTHO05D003901 6.8e-41 170.6 101 82.2
Potri.001G140600 Populus trichocarpa HOM05D001548 ORTHO05D003901 8.8e-41 170.2 101 83.2
VMungo1127G0820 Vigna mungo HOM05D000045 ORTHO05D003901 1.2e-40 169.9 101 82.2
Prupe.2G133300 Prunus persica HOM05D001548 ORTHO05D003901 1.5e-40 169.5 101 83.2
SGA_v2.0_scaffold2G01230 Striga asiatica HOM05D002664 ORTHO05D003901 1.5e-40 169.5 99 84.8
TAR374G1088 Trochodendron aralioides HOM05D001548 ORTHO05D003901 1.5e-40 169.5 101 85.1
Manes.14G037900 Manihot esculenta HOM05D001548 ORTHO05D003901 2.0e-40 169.1 101 85.1
Nn6g33874 Nelumbo nucifera HOM05D001548 ORTHO05D003901 2.0e-40 169.1 101 80.2
TWI14G0157 Tripterygium wilfordii HOM05D001548 ORTHO05D003901 2.0e-40 169.1 101 82.2
Actinidia13594 Actinidia chinensis HOM05D001548 ORTHO05D003901 2.6e-40 168.7 101 85.1
CAN.G330.2 Capsicum annuum HOM05D001548 ORTHO05D003901 2.6e-40 168.7 101 83.2
Phvul.011G215100 Phaseolus vulgaris HOM05D001548 ORTHO05D003901 2.6e-40 168.7 101 82.2
Prupe.2G274500 Prunus persica HOM05D001548 ORTHO05D003901 2.6e-40 168.7 101 82.2
DCAR_009451 Daucus carota HOM05D001548 ORTHO05D003901 3.4e-40 168.3 101 83.2
Prupe.2G274600 Prunus persica HOM05D001548 ORTHO05D003901 3.4e-40 168.3 101 82.2
RcHm_v2.0_Chr1g0363511 Rosa chinensis HOM05D001548 ORTHO05D003901 3.4e-40 168.3 101 81.2
Sed0024517 Sechium edule HOM05D001548 ORTHO05D003901 3.4e-40 168.3 101 83.2
unitig_37.g12491 Utricularia gibba HOM05D001548 ORTHO05D003901 3.4e-40 168.3 101 82.2
FAN06G0102 Fragaria x ananassa HOM05D001548 ORTHO05D003901 4.4e-40 167.9 101 81.2
Lj3g0000692 Lotus japonicus HOM05D001548 ORTHO05D003901 4.4e-40 167.9 101 82.2
Lalb_Chr19g0131941 Lupinus albus HOM05D001548 ORTHO05D003901 4.4e-40 167.9 101 81.2
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 7.5e-40 167.2 101 81.2
FAN06G2630 Fragaria x ananassa HOM05D001548 ORTHO05D003901 7.5e-40 167.2 101 81.2
Lalb_Chr01g0008161 Lupinus albus HOM05D001548 ORTHO05D003901 7.5e-40 167.2 101 81.2
Oeu021698.2 Olea europaea HOM05D001548 ORTHO05D003901 7.5e-40 167.2 101 82.2
Sabra01G0109400 Salix brachista HOM05D001548 ORTHO05D003901 9.8e-40 166.8 101 81.2
Ca_26000_v3 Cicer arietinum L. HOM05D001548 ORTHO05D003901 1.3e-39 166.4 101 80.2
Cc02_g04500 Coffea canephora HOM05D001548 ORTHO05D003901 1.3e-39 166.4 101 82.2
Lj1C977T5 Lonicera japonica HOM05D001548 ORTHO05D003901 1.7e-39 166.0 102 82.4
TPR.G5004 Trifolium pratense HOM05D001548 ORTHO05D003901 1.7e-39 166.0 101 81.2
RcHm_v2.0_Chr1g0373941 Rosa chinensis HOM05D001548 ORTHO05D003901 2.8e-39 165.2 102 80.4
Hund04581 Selenicereus undatus HOM05D001548 ORTHO05D003901 2.8e-39 165.2 101 81.2
Aqoxy7G00517 Aquilegia oxysepala HOM05D001548 ORTHO05D003901 3.7e-39 164.9 101 83.2
FvH4_7g27140 Fragaria vesca HOM05D001548 ORTHO05D003901 3.7e-39 164.9 101 80.2
RcHm_v2.0_Chr1g0373931 Rosa chinensis HOM05D001548 ORTHO05D003901 4.8e-39 164.5 101 81.2
MSTRG.27209 Avicennia marina HOM05D001548 ORTHO05D003901 6.3e-39 164.1 101 79.2
FAN10G1932 Fragaria x ananassa HOM05D001548 ORTHO05D003901 8.3e-39 163.7 101 80.2
FvH4_7g27132 Fragaria vesca HOM05D001548 ORTHO05D003901 1.1e-38 163.3 101 79.2
Medtr4g029500 Medicago truncatula HOM05D001548 ORTHO05D003901 1.1e-38 163.3 101 79.2
vmacro06822 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 1.4e-38 162.9 101 81.2
Psat7g229120 Pisum sativum HOM05D001548 ORTHO05D003901 1.8e-38 162.5 101 79.2
MD01G1178400 Malus domestica HOM05D001548 ORTHO05D003901 2.4e-38 162.2 101 80.2
MD01G1179500 Malus domestica HOM05D001548 ORTHO05D003901 3.1e-38 161.8 101 80.2
MD01G1180600 Malus domestica HOM05D001548 ORTHO05D003901 3.1e-38 161.8 101 79.2
vmacro06821 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 3.1e-38 161.8 101 81.2
Thhalv10004575m.g Eutrema salsugineum HOM05D001548 ORTHO05D003901 4.1e-38 161.4 101 78.2
FAN01G0887 Fragaria x ananassa HOM05D001548 ORTHO05D003901 4.1e-38 161.4 101 78.2
TWI23G1258 Tripterygium wilfordii HOM05D001548 ORTHO05D003901 4.1e-38 161.4 101 80.2
Lsat_1_v5_gn_8_10020 Lactuca sativa HOM05D001548 ORTHO05D003901 5.4e-38 161.0 101 78.2
Rhsim03G0164300 Rhododendron simsii HOM05D001548 ORTHO05D003901 5.4e-38 161.0 101 78.2
MD07G1251000 Malus domestica HOM05D001548 ORTHO05D003901 7.0e-38 160.6 101 79.2
Eucgr.A02908 Eucalyptus grandis HOM05D001548 ORTHO05D003901 9.1e-38 160.2 101 78.2
Lj6g0025655 Lotus japonicus HOM05D001548 ORTHO05D003901 9.1e-38 160.2 101 79.2
Hund04580 Selenicereus undatus HOM05D001548 ORTHO05D003901 9.1e-38 160.2 101 78.2
Zm00001eb000320 Zea mays HOM05D001548 ORTHO05D003901 1.2e-37 159.8 100 78.0
EL10Ac3g05866 Beta vulgaris HOM05D001548 ORTHO05D003901 1.6e-37 159.5 101 80.2
Carub.0008s2220 Capsella rubella HOM05D001548 ORTHO05D003901 1.6e-37 159.5 101 76.2
COL.COLO4_14077 Corchorus olitorius HOM05D001548 ORTHO05D003901 1.6e-37 159.5 95 83.2
Migut.F00504 Erythranthe guttata HOM05D001548 ORTHO05D003901 3.5e-37 158.3 101 79.2
Os03g0101600 Oryza sativa ssp. japonica HOM05D001548 ORTHO05D003901 3.5e-37 158.3 101 76.2
Sp2g24710 Schrenkiella parvula HOM05D001548 ORTHO05D003901 3.5e-37 158.3 101 77.2
AL8G38200 Arabidopsis lyrata HOM05D001548 ORTHO05D003901 4.5e-37 157.9 101 75.2
TAR374G1123 Trochodendron aralioides HOM05D001548 ORTHO05D003901 4.5e-37 157.9 101 80.2
BcaNung01433 Brassica carinata HOM05D001548 ORTHO05D003901 5.9e-37 157.5 101 76.2
A09p07310 Brassica napus HOM05D001548 ORTHO05D003901 5.9e-37 157.5 101 76.2
BraA09t36386Z Brassica rapa HOM05D001548 ORTHO05D003901 5.9e-37 157.5 101 76.2
Phvul.011G215000 Phaseolus vulgaris HOM05D001548 ORTHO05D003901 5.9e-37 157.5 101 76.2
SEGI_07541 Sequoiadendron giganteum HOM05D001548 ORTHO05D003901 5.9e-37 157.5 101 75.2
PSO675G4247 Papaver somniferum HOM05D001548 ORTHO05D003901 7.7e-37 157.1 101 77.2
TAR375G1041 Trochodendron aralioides HOM05D001548 ORTHO05D003901 7.7e-37 157.1 101 78.2
AT5G61510 Arabidopsis thaliana HOM05D001548 ORTHO05D003901 1.3e-36 156.4 101 75.2
Rhsim03G0164200 Rhododendron simsii HOM05D001548 ORTHO05D003901 1.3e-36 156.4 101 76.2
TAR374G0526 Trochodendron aralioides HOM05D001548 ORTHO05D003901 1.3e-36 156.4 101 79.2
BcaC04g23446 Brassica carinata HOM05D001548 ORTHO05D003901 1.7e-36 156.0 101 74.3
C09p08250 Brassica napus HOM05D001548 ORTHO05D003901 1.7e-36 156.0 101 74.3
THA.LOC104801582 Tarenaya hassleriana HOM05D001548 ORTHO05D003901 1.7e-36 156.0 101 76.2
AUR62002230 Chenopodium quinoa HOM05D001548 ORTHO05D003901 2.9e-36 155.2 101 78.2
AUR62015441 Chenopodium quinoa HOM05D001548 ORTHO05D003901 2.9e-36 155.2 101 78.2
VMungo1127G0758 Vigna mungo HOM05D001548 ORTHO05D003901 2.9e-36 155.2 101 74.3
MD07G1250800 Malus domestica HOM05D001548 ORTHO05D003901 3.8e-36 154.8 101 77.2
arahy.Tifrunner.gnm1.ann1.ZGP79Y Arachis hypogaea HOM05D001548 ORTHO05D003901 5.0e-36 154.5 101 73.3
vmacro06824 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 5.0e-36 154.5 100 78.0
BolC9t53735H Brassica oleracea HOM05D001548 ORTHO05D003901 8.5e-36 153.7 101 73.3
CARHR275280 Cardamine hirsuta HOM05D001548 ORTHO05D003901 1.9e-35 152.5 101 73.3
Ah.13g066540 Amaranthus hybridus HOM05D001548 ORTHO05D003901 5.5e-35 151.0 104 72.1
ECA238G3464 Erigeron canadensis HOM05D001548 ORTHO05D003901 7.2e-35 150.6 101 72.3
TWI79G0274 Tripterygium wilfordii HOM05D001548 ORTHO05D003901 9.5e-35 150.2 101 74.3
ATR0057G022 Amborella trichopoda HOM05D001548 ORTHO05D003901 1.2e-34 149.8 101 73.3
HanXRQChr09g0245671 Helianthus annuus HOM05D001548 ORTHO05D003901 1.6e-34 149.4 101 72.3
Lsat_1_v5_gn_2_128480 Lactuca sativa HOM05D001548 ORTHO05D003901 1.0e-33 146.7 101 70.3
vmacro06823 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 1.0e-33 146.7 102 71.6
MSTRG.27210 Avicennia marina HOM05D001548 ORTHO05D003901 1.4e-33 146.4 101 72.3
HPP92_014496 Vanilla planifolia HOM05D001548 ORTHO05D003901 1.8e-33 146.0 101 70.3
Aa31LG11G1900 Aethionema arabicum HOM05D001548 ORTHO05D003901 4.0e-33 144.8 101 71.3
SMO169G0311 Selaginella moellendorffii HOM05D001548 ORTHO05D003901 4.0e-33 144.8 101 69.3
SMO202G0047 Selaginella moellendorffii HOM05D001548 ORTHO05D003901 4.0e-33 144.8 101 69.3
Os10g0561100 Oryza sativa ssp. japonica HOM05D001548 ORTHO05D003901 1.2e-32 143.3 101 67.3
Lsat_1_v5_gn_9_51680 Lactuca sativa HOM05D001548 ORTHO05D003901 1.6e-29 132.9 101 64.4
HanXRQChr16g0512911 Helianthus annuus HOM05D001548 ORTHO05D003901 7.8e-29 130.6 101 61.4
Lsat_1_v5_gn_2_128281 Lactuca sativa HOM05D001548 ORTHO05D003901 2.3e-28 129.0 102 62.7
Lsat_1_v5_gn_2_128581 Lactuca sativa HOM05D001548 ORTHO05D003901 2.3e-28 129.0 102 62.7
Mapoly0002s0101 Marchantia polymorpha HOM05D001548 ORTHO05D003901 2.3e-28 129.0 101 63.4
Pp3c3_23550 Physcomitrium patens HOM05D001548 ORTHO05D003901 3.8e-28 128.3 100 62.0
Pp3c3_23630 Physcomitrium patens HOM05D001548 ORTHO05D003901 3.8e-28 128.3 100 62.0
Lsat_1_v5_gn_9_51700 Lactuca sativa HOM05D001548 ORTHO05D003901 6.6e-28 127.5 100 62.0
Lsat_1_v5_gn_9_51780 Lactuca sativa HOM05D001548 ORTHO05D003901 6.6e-28 127.5 100 63.0
Lsat_1_v5_gn_2_128380 Lactuca sativa HOM05D001548 ORTHO05D003901 2.5e-27 125.6 102 60.8
Lsat_1_v5_gn_2_128201 Lactuca sativa HOM05D001548 ORTHO05D003901 5.6e-27 124.4 103 60.2
HanXRQChr16g0512951 Helianthus annuus HOM05D001548 ORTHO05D003901 1.6e-26 122.9 101 59.4
Lsat_1_v5_gn_2_128100 Lactuca sativa HOM05D001548 ORTHO05D003901 2.3e-25 119.0 102 58.8
Lsat_1_v5_gn_2_128161 Lactuca sativa HOM05D001548 ORTHO05D003901 2.3e-25 119.0 102 58.8
HanXRQChr16g0512921 Helianthus annuus HOM05D001548 ORTHO05D003901 3.0e-25 118.6 100 58.0
HanXRQChr16g0512961 Helianthus annuus HOM05D001548 ORTHO05D003901 5.2e-25 117.9 101 61.4
Lsat_1_v5_gn_1_90381 Lactuca sativa HOM05D001548 ORTHO05D003901 5.2e-25 117.9 102 59.8
vmacro06969 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 2.2e-23 112.5 68 82.4
Dinv06579 Davidia involucrata HOM05D002664 ORTHO05D002974 4.9e-23 111.3 80 71.2
Lsat_1_v5_gn_2_128341 Lactuca sativa HOM05D001548 ORTHO05D003901 4.9e-23 111.3 102 59.8
CBR_g10943 Chara braunii HOM05D001548 ORTHO05D003901 1.1e-22 110.2 103 53.4
Lsat_1_v5_gn_2_128301 Lactuca sativa HOM05D001548 ORTHO05D003901 1.4e-22 109.8 102 57.8
Psat6g139280 Pisum sativum HOM05D001548 ORTHO05D003901 9.8e-16 87.0 101 47.5
SGA_v2.0_scaffold1G00475 Striga asiatica HOM05D001548 ORTHO05D003901 1.6e-13 79.7 53 79.2
SGA_v2.0_scaffold1G00477 Striga asiatica HOM05D001548 ORTHO05D003901 1.6e-13 79.7 53 79.2
SGA_v2.0_scaffold1G00479 Striga asiatica HOM05D001548 ORTHO05D003901 1.6e-13 79.7 53 79.2
CBR_g10944 Chara braunii HOM05D001548 ORTHO05D003901 4.6e-13 78.2 98 38.8
MCO04G102 Micromonas commoda HOM05D001548 ORTHO05D003901 1.1e-11 73.6 97 40.2
MD01G1180100 Malus domestica HOM05D001548 ORTHO05D003901 4.3e-11 71.6 41 82.9
Glyma.12G241000 Glycine max HOM05D001548 ORTHO05D003901 1.1e-09 67.0 62 58.1
GSVIVG01017499001 Vitis vinifera HOM05D001548 ORTHO05D003901 2.2e-07 59.3 30 83.3


User provided reference genes

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