Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p025328 Quercus lobata HOM05D003899 ORTHO05D003655 4.3e-47 191.8 173 100.0
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 2.6e-44 182.6 95 98.9
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 9.4e-18 94.4 90 55.6
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 1.4e-16 90.5 83 57.8
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 4.0e-16 89.0 90 55.6
CiPaw.15G021500 Carya illinoinensis HOM05D003899 ORTHO05D003655 4.4e-15 85.5 84 58.3
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 1.3e-14 84.0 58 56.9
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 1.3e-14 84.0 57 59.6
Phvul.001G073300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 8.3e-14 81.3 58 62.1
Dinv25809 Davidia involucrata HOM05D003899 ORTHO05D003655 1.1e-13 80.9 52 67.3
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 1.1e-13 80.9 57 56.1
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 1.8e-13 80.1 75 62.7
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 4.1e-13 79.0 80 52.5
Dinv41123 Davidia involucrata HOM05D000043 ORTHO05D002577 4.1e-13 79.0 89 48.3
Psat6g039960 Pisum sativum HOM05D003899 ORTHO05D003655 4.1e-13 79.0 75 49.3
Glyma.14G122000 Glycine max HOM05D003899 ORTHO05D003655 7.0e-13 78.2 75 56.0
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 1.6e-12 77.0 90 51.1
Phvul.001G052300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 1.6e-12 77.0 74 52.7
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 1.6e-12 77.0 55 56.4
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 2.7e-12 76.3 68 55.9
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 2.7e-12 76.3 81 54.3
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 5.9e-12 75.1 76 50.0
Medtr1g008675 Medicago truncatula HOM05D003899 ORTHO05D003655 5.9e-12 75.1 62 56.5
Ca_12820_v3 Cicer arietinum L. HOM05D003899 ORTHO05D003655 7.7e-12 74.7 75 50.7
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 1.0e-11 74.3 62 53.2
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 1.0e-11 74.3 62 53.2
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 1.3e-11 73.9 73 47.9
CSS0023777 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 1.7e-11 73.6 79 49.4
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 2.2e-11 73.2 77 48.1
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 2.2e-11 73.2 75 50.7
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 2.9e-11 72.8 76 50.0
Medtr1g008620 Medicago truncatula HOM05D003899 ORTHO05D003655 2.9e-11 72.8 75 48.0
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 2.9e-11 72.8 83 44.6
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 3.8e-11 72.4 80 46.2
PSO170G2020 Papaver somniferum HOM05D003899 ORTHO05D003655 3.8e-11 72.4 74 52.7
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 5.0e-11 72.0 76 42.1
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 5.0e-11 72.0 47 61.7
Lalb_Chr25g0281721 Lupinus albus HOM05D003899 ORTHO05D003655 5.0e-11 72.0 76 48.7
PSO017G4320 Papaver somniferum HOM05D003899 ORTHO05D003655 5.0e-11 72.0 74 52.7
TWI60G1060 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 5.0e-11 72.0 79 46.8
CSS0000461 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 6.5e-11 71.6 65 55.4
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 8.5e-11 71.2 62 51.6
Medtr1g029140 Medicago truncatula HOM05D003899 ORTHO05D003655 8.5e-11 71.2 92 41.3
VMungo0647G2071 Vigna mungo HOM05D003899 ORTHO05D003655 8.5e-11 71.2 60 51.7
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 1.5e-10 70.5 90 45.6
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 1.5e-10 70.5 89 44.9
Psat6g033800 Pisum sativum HOM05D003899 ORTHO05D003655 1.5e-10 70.5 58 58.6
CANSAT25G0207 Cannabis sativa HOM05D003899 ORTHO05D003655 1.9e-10 70.1 91 46.2
TPR.G33315 Trifolium pratense HOM05D003899 ORTHO05D003655 1.9e-10 70.1 79 49.4
Cpa.g.sc49.66 Carica papaya HOM05D003899 ORTHO05D003655 2.5e-10 69.7 90 44.4
Lalb_Chr23g0271351 Lupinus albus HOM05D003899 ORTHO05D003655 2.5e-10 69.7 86 47.7
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 3.2e-10 69.3 91 41.8
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 3.2e-10 69.3 84 41.7
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 4.2e-10 68.9 68 47.1
Glyma.14G121800 Glycine max HOM05D003899 ORTHO05D003655 4.2e-10 68.9 87 46.0
Manes.18G087500 Manihot esculenta HOM05D003899 ORTHO05D003655 7.2e-10 68.2 90 44.4
Nn1g06203 Nelumbo nucifera HOM05D003899 ORTHO05D003655 7.2e-10 68.2 58 55.2
MSTRG.1375 Avicennia marina HOM05D003899 ORTHO05D003655 9.4e-10 67.8 88 44.3
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 1.2e-09 67.4 86 46.5
Duzib093G0910 Durio zibethinus HOM05D003899 ORTHO05D003655 1.2e-09 67.4 83 45.8
Psat6g033720 Pisum sativum HOM05D003899 ORTHO05D003655 1.2e-09 67.4 58 56.9
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 1.6e-09 67.0 93 45.2
Cpa.g.sc42.130 Carica papaya HOM05D003899 ORTHO05D003655 2.7e-09 66.2 76 42.1
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 2.7e-09 66.2 62 46.8
PGSC0003DMG400027629 Solanum tuberosum HOM05D003899 ORTHO05D003655 2.7e-09 66.2 55 54.5
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 6.1e-09 65.1 67 49.3
Nitab4.5_0008388g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 6.1e-09 65.1 85 47.1
Gorai.003G068900 Gossypium raimondii HOM05D003899 ORTHO05D003655 8.0e-09 64.7 67 47.8
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 1.0e-08 64.3 67 49.3
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 1.0e-08 64.3 91 41.8
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 1.0e-08 64.3 91 41.8
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 1.4e-08 63.9 76 50.0
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 1.4e-08 63.9 89 43.8
TPR.G12083 Trifolium pratense HOM05D003899 ORTHO05D003655 1.4e-08 63.9 86 45.3
Potri.005G060700 Populus trichocarpa HOM05D003899 ORTHO05D003655 1.8e-08 63.5 89 44.9
Hma1.2p1_0528F.1_g173010 Hydrangea macrophylla HOM05D003899 ORTHO05D003655 2.3e-08 63.2 81 46.9
CANSAT11G1227 Cannabis sativa HOM05D003899 ORTHO05D003655 3.0e-08 62.8 46 60.9
PGSC0003DMG400001039 Solanum tuberosum HOM05D003899 ORTHO05D003655 3.0e-08 62.8 49 57.1
Nitab4.5_0001140g0230 Nicotiana tabacum HOM05D003899 ORTHO05D003655 4.0e-08 62.4 85 45.9
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 4.0e-08 62.4 76 44.7
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 5.2e-08 62.0 75 46.7
Potri.007G108100 Populus trichocarpa HOM05D003899 ORTHO05D003655 5.2e-08 62.0 89 42.7
Sopen07g030130 Solanum pennellii HOM05D003899 ORTHO05D003655 8.8e-08 61.2 77 42.9
CAN.G375.87 Capsicum annuum HOM05D003899 ORTHO05D003655 1.2e-07 60.8 68 47.1
BcaB07g33974 Brassica carinata HOM05D003899 ORTHO05D003655 1.5e-07 60.5 44 54.5
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 1.5e-07 60.5 78 44.9
BcaC08g42822 Brassica carinata HOM05D003899 ORTHO05D003655 2.6e-07 59.7 44 54.5
A10p07750 Brassica napus HOM05D003899 ORTHO05D003655 2.6e-07 59.7 44 54.5
C06p00330 Brassica napus HOM05D003899 ORTHO05D003655 2.6e-07 59.7 44 54.5
BolC6t35162H Brassica oleracea HOM05D003899 ORTHO05D003655 2.6e-07 59.7 44 54.5
BraSC36t46027Z Brassica rapa HOM05D003899 ORTHO05D003655 2.6e-07 59.7 44 54.5
ECA246G5022 Erigeron canadensis HOM05D003899 ORTHO05D003655 2.6e-07 59.7 60 45.0
HanXRQChr05g0161081 Helianthus annuus HOM05D003899 ORTHO05D003655 2.6e-07 59.7 53 47.2
Lj2C604T3 Lonicera japonica HOM05D003899 ORTHO05D003655 2.6e-07 59.7 75 45.3
ClCG09G009790 Citrullus lanatus HOM05D003899 ORTHO05D003655 3.4e-07 59.3 61 49.2
Lsat_1_v5_gn_9_107661 Lactuca sativa HOM05D003899 ORTHO05D003655 3.4e-07 59.3 51 51.0
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 4.4e-07 58.9 91 40.7
Nitab4.5_0002974g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 4.4e-07 58.9 77 44.2
SGA_v2.0_scaffold73G24343 Striga asiatica HOM05D003899 ORTHO05D003655 4.4e-07 58.9 57 47.4
Nitab4.5_0015327g0010 Nicotiana tabacum HOM05D003899 ORTHO05D003655 5.7e-07 58.5 79 40.5
Sed0020885 Sechium edule HOM05D003899 ORTHO05D003655 5.7e-07 58.5 76 46.1
Thhalv10012331m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 7.5e-07 58.2 47 46.8
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 7.5e-07 58.2 91 40.7
Lsat_1_v5_gn_5_108760 Lactuca sativa HOM05D003899 ORTHO05D003655 7.5e-07 58.2 51 47.1
Sabra07G0088500 Salix brachista HOM05D000850 ORTHO05D000266 7.5e-07 58.2 89 42.7
Sp1g32910 Schrenkiella parvula HOM05D003899 ORTHO05D003655 9.8e-07 57.8 47 48.9
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 1.3e-06 57.4 90 37.8
Migut.M00600 Erythranthe guttata HOM05D003899 ORTHO05D003655 2.8e-06 56.2 82 36.6
HanXRQChr08g0232541 Helianthus annuus HOM05D003899 ORTHO05D003655 3.7e-06 55.8 51 47.1
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 3.7e-06 55.8 79 41.8
TWI79G1413 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 3.7e-06 55.8 74 43.2
Duzib264G1053 Durio zibethinus HOM05D003899 ORTHO05D003655 4.9e-06 55.5 57 40.4
Sc02g0004420 Simmondsia chinensis HOM05D003899 ORTHO05D003655 4.9e-06 55.5 68 39.7
AL1G51910 Arabidopsis lyrata HOM05D003899 ORTHO05D003655 6.3e-06 55.1 47 48.9
AT1G43790 Arabidopsis thaliana HOM05D003899 ORTHO05D003655 6.3e-06 55.1 44 52.3
ECA238G1798 Erigeron canadensis HOM05D003899 ORTHO05D003655 6.3e-06 55.1 77 44.2
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 6.3e-06 55.1 77 42.9
CsaV3_7G024950 Cucumis sativus L. HOM05D000219 ORTHO05D000226 8.3e-06 54.7 57 49.1
PGR002G0007 Punica granatum HOM05D003899 ORTHO05D003655 8.3e-06 54.7 37 59.5


User provided reference genes

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