Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 1.3e-149 533.1 294 100.0
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 2.7e-110 402.5 295 75.6
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 5.9e-105 384.8 295 73.2
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 7.7e-105 384.4 295 72.9
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.0e-104 384.0 296 72.0
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.3e-104 383.6 296 71.3
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 1.1e-103 380.6 296 70.9
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 1.9e-103 379.8 294 71.1
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 4.3e-103 378.6 295 70.2
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 5.6e-103 378.3 295 69.5
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.6e-102 376.7 294 70.4
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 1.6e-102 376.7 294 71.4
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 3.6e-102 375.6 294 70.4
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 6.1e-102 374.8 295 69.8
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 3.0e-101 372.5 294 69.0
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 9.8e-100 367.5 296 69.3
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 1.7e-99 366.7 295 68.8
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 4.9e-99 365.2 295 69.2
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 1.0e-96 357.5 295 67.5
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.7e-96 356.7 294 67.0
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 2.3e-96 356.3 295 67.1
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 5.0e-96 355.1 288 67.7
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 1.5e-95 353.6 295 64.4
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 1.9e-95 353.2 295 68.5
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 1.9e-95 353.2 291 66.7
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 3.3e-95 352.4 281 70.8
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 4.3e-95 352.1 294 65.3
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 5.6e-95 351.7 294 65.3
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 1.6e-94 350.1 288 67.4
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 1.0e-93 347.4 294 65.6
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 6.8e-93 344.7 294 65.0
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 8.9e-93 344.4 295 62.7
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 6.4e-91 338.2 291 65.3
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 1.9e-90 336.7 292 63.7
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 3.2e-90 335.9 295 65.1
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.2e-89 334.0 274 67.5
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 2.7e-89 332.8 289 64.0
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 1.7e-88 330.1 272 67.3
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 1.1e-87 327.4 300 61.0
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 1.9e-87 326.6 302 59.9
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 4.3e-87 325.5 299 59.9
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 1.2e-86 323.9 296 66.2
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 1.2e-86 323.9 292 63.0
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 1.6e-86 323.6 298 60.7
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 2.4e-82 309.7 294 56.8
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 7.1e-82 308.1 297 58.6
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 2.6e-76 289.7 205 75.1
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 2.2e-75 286.6 306 55.2
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 2.7e-73 279.6 290 58.6
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 8.6e-72 274.6 306 54.6
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 9.6e-71 271.2 294 53.4
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 3.1e-69 266.2 243 61.3
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 1.1e-66 257.7 291 55.3
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 1.7e-64 250.4 247 57.5
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 1.1e-63 247.7 217 66.4
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 1.1e-53 214.5 183 62.3
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 2.2e-51 206.8 206 57.8
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 1.9e-42 177.2 271 43.9
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 8.2e-22 108.6 269 33.8
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 4.5e-20 102.8 276 31.2
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 2.2e-14 84.0 64 68.8
CsaV3_6G001940 Cucumis sativus L. HOM05D000215 ORTHO05D008904 2.2e-11 73.9 289 27.7
ClCG11G006020 Citrullus lanatus HOM05D000215 ORTHO05D008904 2.9e-11 73.6 289 27.0
vmacro10024 Vaccinium macrocarpon HOM05D000215 ORTHO05D008904 2.9e-11 73.6 275 28.7
SGA_v2.0_scaffold114G31933 Striga asiatica HOM05D000215 ORTHO05D002282 5.0e-11 72.8 281 26.0
MELO3C008310.2 Cucumis melo HOM05D000215 ORTHO05D008904 6.5e-11 72.4 289 27.0
BcaC07g39773 Brassica carinata HOM05D000215 ORTHO05D001676 1.1e-10 71.6 278 27.3
Duzib235G1018 Durio zibethinus HOM05D000215 ORTHO05D007108 1.5e-10 71.2 248 28.6
Aa31LG1G16780 Aethionema arabicum HOM05D002131 ORTHO05D002141 7.2e-10 68.9 295 28.5
Sp7g19440 Schrenkiella parvula HOM05D000215 ORTHO05D007108 1.2e-09 68.2 237 30.0
Manes.16G015200 Manihot esculenta HOM05D000215 ORTHO05D007108 2.1e-09 67.4 228 26.3
CiPaw.10G113900 Carya illinoinensis HOM05D000215 ORTHO05D007108 6.1e-09 65.9 248 28.6
Actinidia05554 Actinidia chinensis HOM05D000215 ORTHO05D007108 1.4e-08 64.7 236 29.2
Actinidia13517 Actinidia chinensis HOM05D000215 ORTHO05D003454 1.4e-08 64.7 272 26.1
GSVIVG01006112001 Vitis vinifera HOM05D000215 ORTHO05D007108 3.0e-08 63.5 229 26.6
Rhsim12G0121400 Rhododendron simsii HOM05D000215 ORTHO05D003454 4.0e-08 63.2 276 26.1
Lsat_1_v5_gn_2_123761 Lactuca sativa HOM05D000215 ORTHO05D008904 5.2e-08 62.8 270 27.0
Haze_06635 Corylus avellana HOM05D000215 ORTHO05D007108 6.7e-08 62.4 199 28.6
Haze_06646 Corylus avellana HOM05D000215 ORTHO05D007108 1.2e-07 61.6 199 28.6
MBI02_g37288_MAGBIO Magnolia biondii HOM05D000215 ORTHO05D007108 1.2e-07 61.6 214 26.6
A01p12690 Brassica napus HOM05D000215 ORTHO05D007108 1.5e-07 61.2 214 27.6
BraA01t01212Z Brassica rapa HOM05D000215 ORTHO05D007108 1.5e-07 61.2 214 27.6
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 1.5e-07 61.2 199 28.6
Lj6P804T36 Lonicera japonica HOM05D000215 ORTHO05D003454 1.5e-07 61.2 273 25.6
Thhalv10025498m.g Eutrema salsugineum HOM05D000215 ORTHO05D007108 2.0e-07 60.8 224 28.1
Rhsim08G0170500 Rhododendron simsii HOM05D000215 ORTHO05D003454 2.0e-07 60.8 256 25.4
Medtr7g053260 Medicago truncatula HOM05D000215 ORTHO05D002282 2.6e-07 60.5 280 24.6
PGR004G2784 Punica granatum HOM05D000215 ORTHO05D007108 2.6e-07 60.5 230 27.0
QL05p077977 Quercus lobata HOM05D000215 ORTHO05D007108 3.3e-07 60.1 213 27.7
PSO210G4266 Papaver somniferum HOM05D000215 ORTHO05D007108 4.4e-07 59.7 234 27.8
COL.COLO4_36974 Corchorus olitorius HOM05D000215 ORTHO05D003454 5.7e-07 59.3 277 24.9
Glyma.02G264200 Glycine max HOM05D000215 ORTHO05D008904 5.7e-07 59.3 268 26.1
AT4G21350 Arabidopsis thaliana HOM05D000215 ORTHO05D007108 9.7e-07 58.5 288 25.7
CSS0025946 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D003454 1.3e-06 58.2 262 26.0
CSS0030448 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D003454 1.3e-06 58.2 262 26.0
SHI02135 Sapria himalayana HOM05D000215 ORTHO05D007108 1.3e-06 58.2 203 28.6
CARHR227940 Cardamine hirsuta HOM05D000215 ORTHO05D007108 2.8e-06 57.0 210 27.6
MELO3C012003.2 Cucumis melo HOM05D000215 ORTHO05D003454 2.8e-06 57.0 271 22.9
Lalb_Chr10g0105221 Lupinus albus HOM05D000215 ORTHO05D008904 2.8e-06 57.0 292 22.3
ATR0804G090 Amborella trichopoda HOM05D000215 ORTHO05D007108 3.7e-06 56.6 214 31.3
ECA246G0614 Erigeron canadensis HOM05D001816 ORTHO05D002001 3.7e-06 56.6 278 22.7
Eucgr.H02615 Eucalyptus grandis HOM05D000215 ORTHO05D003454 3.7e-06 56.6 258 23.3
Pp3c9_17040 Physcomitrium patens HOM05D000215 ORTHO05D008904 3.7e-06 56.6 278 24.5
Pp3c9_17047 Physcomitrium patens HOM05D000215 ORTHO05D008904 3.7e-06 56.6 278 24.5
Sed0010978 Sechium edule HOM05D000215 ORTHO05D007108 3.7e-06 56.6 210 29.0
AL7G32750 Arabidopsis lyrata HOM05D000215 ORTHO05D007108 4.8e-06 56.2 291 25.1
DCAR_026544 Daucus carota HOM05D000215 ORTHO05D003454 4.8e-06 56.2 280 27.1
Lsat_1_v5_gn_5_17060 Lactuca sativa HOM05D000215 ORTHO05D003454 6.3e-06 55.8 289 23.9
Oeu001742.1 Olea europaea HOM05D000215 ORTHO05D003454 6.3e-06 55.8 267 25.5
Sabra10G0143200 Salix brachista HOM05D000215 ORTHO05D008904 6.3e-06 55.8 279 27.2
Hma1.2p1_0176F.1_g077670 Hydrangea macrophylla HOM05D000215 ORTHO05D003454 8.2e-06 55.5 292 26.4
Peaxi162Scf00338g00001 Petunia axillaris HOM05D000215 ORTHO05D003454 8.2e-06 55.5 279 26.9


User provided reference genes

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