Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 3.3e-80 301.6 145 100.0
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.5e-37 159.8 148 61.5
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 2.1e-31 139.4 146 58.2
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 2.0e-29 132.9 142 57.7
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 4.9e-20 101.7 115 53.0
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 5.5e-19 98.2 137 44.5
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 6.0e-18 94.7 150 46.7
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 7.9e-18 94.4 129 44.2
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.0e-17 94.0 126 47.6
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.3e-17 93.6 136 43.4
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 2.3e-17 92.8 114 48.2
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 5.1e-17 91.7 137 46.0
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.1e-16 90.5 118 48.3
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 1.9e-16 89.7 149 40.9
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 1.9e-16 89.7 126 45.2
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 3.3e-16 89.0 118 45.8
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 2.2e-15 86.3 125 45.6
Potri.003G070750 Populus trichocarpa HOM05D008824 ORTHO05D003125 3.7e-15 85.5 131 42.0
THA.LOC104814116 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 6.3e-15 84.7 127 43.3
Medtr1g012950 Medicago truncatula HOM05D013068 ORTHO05D003125 8.2e-15 84.3 152 35.5
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 1.1e-14 84.0 129 45.7
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.1e-14 84.0 136 42.6
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.1e-14 84.0 136 42.6
AT5G11070 Arabidopsis thaliana HOM05D008824 ORTHO05D003125 2.4e-14 82.8 148 39.9
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 3.1e-14 82.4 109 47.7
Aa31LG3G16070 Aethionema arabicum HOM05D008824 ORTHO05D003125 4.1e-14 82.0 149 40.3
CANSAT01G2013 Cannabis sativa HOM05D008824 ORTHO05D003125 4.1e-14 82.0 122 42.6
C03p05580 Brassica napus HOM05D008824 ORTHO05D003125 5.3e-14 81.6 146 37.0
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 5.3e-14 81.6 146 39.0
Thhalv10016092m.g Eutrema salsugineum HOM05D008824 ORTHO05D003125 6.9e-14 81.3 150 38.7
AL6G21690 Arabidopsis lyrata HOM05D008824 ORTHO05D003125 9.0e-14 80.9 149 39.6
A03p04850 Brassica napus HOM05D008824 ORTHO05D003125 1.2e-13 80.5 150 37.3
BraA03t09824Z Brassica rapa HOM05D008824 ORTHO05D003125 1.2e-13 80.5 150 37.3
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 1.2e-13 80.5 139 36.7
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 1.2e-13 80.5 122 38.5
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 1.5e-13 80.1 134 43.3
BraA10t44721Z Brassica rapa HOM05D008824 ORTHO05D003125 3.4e-13 79.0 140 37.1
BcaB01g05491 Brassica carinata HOM05D008824 ORTHO05D003125 4.5e-13 78.6 151 36.4
BcaB01g06316 Brassica carinata HOM05D008824 ORTHO05D003125 4.5e-13 78.6 151 36.4
BcaC04g19263 Brassica carinata HOM05D008824 ORTHO05D003125 4.5e-13 78.6 141 36.9
A10p26630 Brassica napus HOM05D008824 ORTHO05D003125 4.5e-13 78.6 141 36.9
C09p65790 Brassica napus HOM05D008824 ORTHO05D003125 4.5e-13 78.6 141 36.9
BolC3t13066H Brassica oleracea HOM05D008824 ORTHO05D003125 4.5e-13 78.6 151 36.4
BolC9t59401H Brassica oleracea HOM05D008824 ORTHO05D003125 4.5e-13 78.6 141 36.9
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.5e-13 78.6 151 40.4
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.5e-13 78.6 151 40.4
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 7.7e-13 77.8 149 40.3
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 7.7e-13 77.8 150 40.7
Sp6g32430 Schrenkiella parvula HOM05D008824 ORTHO05D003125 1.3e-12 77.0 147 36.1
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 1.7e-12 76.6 116 45.7
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 1.7e-12 76.6 92 50.0
BcaNung01909 Brassica carinata HOM05D008824 ORTHO05D003125 2.2e-12 76.3 146 39.0
BcaNung01911 Brassica carinata HOM05D008824 ORTHO05D003125 2.2e-12 76.3 146 39.0
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.2e-12 76.3 156 38.5
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 2.9e-12 75.9 141 36.2
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 3.8e-12 75.5 137 38.7
Carub.0006s0958 Capsella rubella HOM05D008824 ORTHO05D003125 5.0e-12 75.1 135 40.0
Cpa.g.sc187.25 Carica papaya HOM05D008824 ORTHO05D003125 5.0e-12 75.1 124 40.3
Sabra06G0202600 Salix brachista HOM05D008824 ORTHO05D003125 5.0e-12 75.1 148 38.5
CARHR202220 Cardamine hirsuta HOM05D008824 ORTHO05D003125 6.5e-12 74.7 134 37.3
MELO3C030306.2 Cucumis melo HOM05D008824 ORTHO05D003125 6.5e-12 74.7 108 45.4
BraA02t05065Z Brassica rapa HOM05D008824 ORTHO05D003125 8.5e-12 74.3 145 38.6
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 8.5e-12 74.3 117 42.7
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 1.1e-11 73.9 136 39.7
BcaNung07098 Brassica carinata HOM05D008824 ORTHO05D003125 1.1e-11 73.9 141 38.3
BolC2t06442H Brassica oleracea HOM05D008824 ORTHO05D003125 1.1e-11 73.9 90 52.2
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 1.1e-11 73.9 138 39.1
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 1.4e-11 73.6 97 47.4
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 1.4e-11 73.6 100 38.0
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.4e-11 73.6 151 39.1
BcaC03g13348 Brassica carinata HOM05D008824 ORTHO05D003125 1.9e-11 73.2 118 42.4
C02p04840 Brassica napus HOM05D008824 ORTHO05D003125 1.9e-11 73.2 118 42.4
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 1.9e-11 73.2 146 38.4
Lj5g0018030 Lotus japonicus HOM05D013068 ORTHO05D003125 2.5e-11 72.8 154 37.0
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 2.5e-11 72.8 125 40.0
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 2.5e-11 72.8 115 43.5
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 3.2e-11 72.4 135 42.2
Sabra18G0025300 Salix brachista HOM05D008824 ORTHO05D003125 3.2e-11 72.4 129 39.5
FAN27G0582 Fragaria x ananassa HOM05D019695 ORTHO05D022679 4.2e-11 72.0 142 42.3
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 4.2e-11 72.0 128 33.6
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 4.2e-11 72.0 127 41.7
Prupe.1G486000 Prunus persica HOM05D019695 ORTHO05D022679 7.2e-11 71.2 149 43.0
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 9.4e-11 70.9 125 40.8
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 1.2e-10 70.5 81 49.4
FvH4_2g28320 Fragaria vesca HOM05D019695 ORTHO05D022679 1.6e-10 70.1 142 41.5
FAN20G0523 Fragaria x ananassa HOM05D019695 ORTHO05D022679 1.6e-10 70.1 142 41.5
FAN24G2106 Fragaria x ananassa HOM05D019695 ORTHO05D022679 1.6e-10 70.1 142 41.5
Glyma.14G112500 Glycine max HOM05D003969 ORTHO05D003125 1.6e-10 70.1 157 38.2
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 1.6e-10 70.1 133 39.8
TPR.G15776 Trifolium pratense HOM05D003969 ORTHO05D003125 1.6e-10 70.1 129 40.3
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 2.1e-10 69.7 131 39.7
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 3.6e-10 68.9 133 35.3
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 4.6e-10 68.6 142 37.3
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 6.1e-10 68.2 135 37.8
Gohir.D07G034000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 6.1e-10 68.2 137 37.2
Gorai.001G035600 Gossypium raimondii HOM05D003969 ORTHO05D003125 6.1e-10 68.2 137 37.2
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 6.1e-10 68.2 146 34.2
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.0e-09 67.4 129 38.0
TPR.G38870 Trifolium pratense HOM05D013068 ORTHO05D003125 1.0e-09 67.4 164 34.1
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.4e-09 67.0 134 38.1
FAN15G0756 Fragaria x ananassa HOM05D019695 ORTHO05D022679 1.4e-09 67.0 112 43.8
Glyma.17G215400 Glycine max HOM05D013068 ORTHO05D003125 1.4e-09 67.0 140 38.6
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 1.8e-09 66.6 138 37.0
Sed0014973 Sechium edule HOM05D003969 ORTHO05D003125 1.8e-09 66.6 121 39.7
Sc23g0006550 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.8e-09 66.6 131 37.4
TWI34G0986 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 1.8e-09 66.6 109 41.3
MSTRG.26029 Avicennia marina HOM05D003969 ORTHO05D003125 2.3e-09 66.2 80 47.5
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 2.3e-09 66.2 115 41.7
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 3.0e-09 65.9 94 47.9
A02p00820 Brassica napus HOM05D008824 ORTHO05D003125 3.9e-09 65.5 97 45.4
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 3.9e-09 65.5 101 41.6
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 5.1e-09 65.1 126 40.5
CDE02G3523 Ceratophyllum demersum HOM05D000894 ORTHO05D001833 5.1e-09 65.1 124 37.9
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 5.1e-09 65.1 94 46.8
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 5.1e-09 65.1 132 37.1
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 6.7e-09 64.7 143 30.8
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 6.7e-09 64.7 133 34.6
EL10Ac2g04157 Beta vulgaris HOM05D003969 ORTHO05D003125 8.8e-09 64.3 129 41.1
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 8.8e-09 64.3 130 36.2
Ciclev10009935m.g Citrus clementina HOM05D003969 ORTHO05D003125 1.1e-08 63.9 126 39.7
Gohir.D05G059000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.1e-08 63.9 81 40.7
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 1.5e-08 63.5 125 38.4
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 2.0e-08 63.2 132 34.1
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 2.0e-08 63.2 127 37.0
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 2.5e-08 62.8 137 36.5
Gorai.009G060100 Gossypium raimondii HOM05D003969 ORTHO05D003125 2.5e-08 62.8 81 39.5
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 2.5e-08 62.8 132 38.6
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 5.7e-08 61.6 134 32.1
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 5.7e-08 61.6 139 33.1
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 7.4e-08 61.2 135 38.5
Thhalv10005689m.g Eutrema salsugineum HOM05D003969 ORTHO05D003125 9.7e-08 60.8 147 34.0
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 9.7e-08 60.8 149 36.9
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 9.7e-08 60.8 124 37.1
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 1.3e-07 60.5 123 39.8
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 1.3e-07 60.5 125 35.2
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 1.3e-07 60.5 123 35.8
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 1.7e-07 60.1 119 37.0
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 1.7e-07 60.1 125 34.4
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.7e-07 60.1 124 32.3
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 2.2e-07 59.7 108 38.0
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 2.2e-07 59.7 108 38.0
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 2.2e-07 59.7 129 36.4
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.2e-07 59.7 85 45.9
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 2.2e-07 59.7 172 32.6
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.8e-07 59.3 141 35.5
Lalb_Chr13g0301201 Lupinus albus HOM05D003969 ORTHO05D003125 2.8e-07 59.3 125 33.6
Sp7g07270 Schrenkiella parvula HOM05D003969 ORTHO05D003125 2.8e-07 59.3 138 34.8
CDE02G0310 Ceratophyllum demersum HOM05D003969 ORTHO05D003125 3.7e-07 58.9 81 42.0
AUR62012444 Chenopodium quinoa HOM05D003969 ORTHO05D003125 3.7e-07 58.9 126 41.3
AUR62031569 Chenopodium quinoa HOM05D003969 ORTHO05D003125 3.7e-07 58.9 126 41.3
Eucgr.C01632 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.7e-07 58.9 78 47.4
Lalb_Chr24g0402081 Lupinus albus HOM05D013068 ORTHO05D003125 3.7e-07 58.9 134 33.6
TWI34G1900 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 3.7e-07 58.9 109 38.5
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.8e-07 58.5 93 41.9
MSTRG.10635 Avicennia marina HOM05D003969 ORTHO05D003125 6.3e-07 58.2 126 37.3
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 6.3e-07 58.2 147 34.0
Solyc07g007150.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 6.3e-07 58.2 134 32.1
Aqoxy7G00610 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 8.2e-07 57.8 137 35.0
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 8.2e-07 57.8 149 35.6
MSTRG.10639 Avicennia marina HOM05D003969 ORTHO05D003125 8.2e-07 57.8 106 37.7
Eucgr.C01690 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.1e-06 57.4 78 47.4
Phvul.001G047400 Phaseolus vulgaris HOM05D013068 ORTHO05D003125 1.1e-06 57.4 137 32.8
VMungo0647G1373 Vigna mungo HOM05D013068 ORTHO05D003125 1.1e-06 57.4 129 35.7
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 1.4e-06 57.0 131 35.9
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 1.4e-06 57.0 125 36.8
CsaV3_2G032290 Cucumis sativus L. HOM05D008824 ORTHO05D003125 1.8e-06 56.6 92 40.2
Eucgr.C01639 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.4e-06 56.2 95 42.1
Eucgr.C01701 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.4e-06 56.2 114 41.2
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 2.4e-06 56.2 141 34.8
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 2.4e-06 56.2 176 29.0
Eucgr.C01687 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.1e-06 55.8 98 44.9
Eucgr.L03259 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.1e-06 55.8 94 43.6
Gohir.A07G030200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 3.1e-06 55.8 131 32.1
Sopen07g003200 Solanum pennellii HOM05D003969 ORTHO05D003125 3.1e-06 55.8 136 30.9
A08p09570 Brassica napus HOM05D003969 ORTHO05D003125 4.1e-06 55.5 117 33.3
BraA08t32954Z Brassica rapa HOM05D003969 ORTHO05D003125 4.1e-06 55.5 117 33.3
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 4.1e-06 55.5 109 38.5
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 4.1e-06 55.5 136 32.4
Potri.003G048200 Populus trichocarpa HOM05D008824 ORTHO05D003125 4.1e-06 55.5 81 39.5
THA.LOC104815394 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 4.1e-06 55.5 160 31.2
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 5.3e-06 55.1 139 33.8
Eucgr.C01695 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.3e-06 55.1 98 44.9
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 5.3e-06 55.1 129 36.4
CARHR217160 Cardamine hirsuta HOM05D003969 ORTHO05D003125 6.9e-06 54.7 138 34.8
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 6.9e-06 54.7 141 34.0
Sc08g0005750 Simmondsia chinensis HOM05D003969 ORTHO05D003125 6.9e-06 54.7 125 34.4
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 9.1e-06 54.3 135 34.8
PGSC0003DMG400030696 Solanum tuberosum HOM05D003969 ORTHO05D003125 9.1e-06 54.3 141 33.3


User provided reference genes

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