Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p019358 Quercus lobata HOM05D000150 ORTHO05D000108 5.3e-37 157.1 78 100.0
QL10p058880 Quercus lobata HOM05D000150 ORTHO05D000108 1.3e-35 152.5 78 97.4
QL10p058885 Quercus lobata HOM05D000150 ORTHO05D000108 1.0e-16 89.7 62 72.6
QL02p019353 Quercus lobata HOM05D000150 ORTHO05D000108 2.3e-16 88.6 62 71.0
Haze_11165 Corylus avellana HOM05D000150 ORTHO05D000108 7.0e-13 77.0 62 62.9
QL10p058904 Quercus lobata HOM05D000150 ORTHO05D000108 2.0e-12 75.5 62 62.9
Thecc.04G159900 Theobroma cacao HOM05D000150 ORTHO05D000108 3.5e-12 74.7 62 64.5
Haze_11164 Corylus avellana HOM05D000150 ORTHO05D000108 4.6e-12 74.3 62 61.3
QL10p059028 Quercus lobata HOM05D000150 ORTHO05D000108 5.9e-12 73.9 62 61.3
Cfa008491 Carpinus fangiana HOM05D000150 ORTHO05D000108 7.8e-12 73.6 62 59.7
Haze_10104 Corylus avellana HOM05D000150 ORTHO05D000108 1.3e-11 72.8 63 58.7
QL10p058922 Quercus lobata HOM05D000150 ORTHO05D000108 1.3e-11 72.8 62 59.7
QL02p019330 Quercus lobata HOM05D000150 ORTHO05D000108 5.0e-11 70.9 62 58.1
QL02p019192 Quercus lobata HOM05D000150 ORTHO05D000108 6.6e-11 70.5 62 59.7
COL.COLO4_31988 Corchorus olitorius HOM05D000150 ORTHO05D000108 1.1e-10 69.7 62 59.7
Duzib212G0008 Durio zibethinus HOM05D000150 ORTHO05D000108 2.5e-10 68.6 62 56.5
MD02G1003300 Malus domestica HOM05D000150 ORTHO05D000108 3.3e-10 68.2 61 57.4
QL10p058945 Quercus lobata HOM05D000150 ORTHO05D013422 3.3e-10 68.2 62 58.1
CiPaw.01G230400 Carya illinoinensis HOM05D000150 ORTHO05D000108 1.2e-09 66.2 64 56.2
CSS0021845 Camellia sinensis var. sinensis HOM05D000150 ORTHO05D000108 2.1e-09 65.5 57 63.2
CSS0030100 Camellia sinensis var. sinensis HOM05D000150 ORTHO05D000108 2.1e-09 65.5 57 63.2
CSS0050019 Camellia sinensis var. sinensis HOM05D000150 ORTHO05D000108 2.8e-09 65.1 50 66.0
Duzib151G0927 Durio zibethinus HOM05D000150 ORTHO05D000108 2.8e-09 65.1 63 57.1
MSTRG.4311 Avicennia marina HOM05D000150 ORTHO05D000108 3.6e-09 64.7 53 58.5
CSS0026915 Camellia sinensis var. sinensis HOM05D000150 ORTHO05D000108 4.7e-09 64.3 57 61.4
Dinv33228 Davidia involucrata HOM05D000150 ORTHO05D000108 6.2e-09 63.9 62 59.7
Hma1.2p1_0108F.1_g051930 Hydrangea macrophylla HOM05D000150 ORTHO05D000108 1.4e-08 62.8 61 55.7
Hma1.2p1_0108F.1_g051940 Hydrangea macrophylla HOM05D000150 ORTHO05D000108 1.4e-08 62.8 61 55.7
ClCG09G013690 Citrullus lanatus HOM05D000150 ORTHO05D000108 1.8e-08 62.4 59 50.8
PGR142G1643 Punica granatum HOM05D000150 ORTHO05D000108 1.8e-08 62.4 63 57.1
Lj6A271T52 Lonicera japonica HOM05D000150 ORTHO05D000108 2.3e-08 62.0 52 61.5
Rhsim02G0086400 Rhododendron simsii HOM05D000150 ORTHO05D000108 3.1e-08 61.6 54 59.3
Oeu015699.1 Olea europaea HOM05D000150 ORTHO05D000108 5.2e-08 60.8 61 52.5
vmacro15704 Vaccinium macrocarpon HOM05D000150 ORTHO05D000108 5.2e-08 60.8 77 46.8
Actinidia28971 Actinidia chinensis HOM05D000150 ORTHO05D000108 6.8e-08 60.5 55 61.8
Nitab4.5_0008255g0010 Nicotiana tabacum HOM05D000150 ORTHO05D000108 6.8e-08 60.5 62 51.6
Rhsim02G0086600 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.8e-08 60.5 54 59.3
Sc13g0007400 Simmondsia chinensis HOM05D000150 ORTHO05D000108 8.9e-08 60.1 64 51.6
Thecc.04G160100 Theobroma cacao HOM05D000150 ORTHO05D000108 8.9e-08 60.1 62 54.8
Peaxi162Scf00883g00078 Petunia axillaris HOM05D000150 ORTHO05D000108 1.2e-07 59.7 52 57.7
Ciclev10020092m.g Citrus clementina HOM05D000150 ORTHO05D000108 2.0e-07 58.9 64 54.7
Duzib268G1669 Durio zibethinus HOM05D000150 ORTHO05D000108 2.0e-07 58.9 56 55.4
MSTRG.9724 Avicennia marina HOM05D000150 ORTHO05D000108 3.4e-07 58.2 53 56.6
Nitab4.5_0000009g0030 Nicotiana tabacum HOM05D000150 ORTHO05D000108 3.4e-07 58.2 55 50.9
MD15G1146500 Malus domestica HOM05D000150 ORTHO05D000108 4.4e-07 57.8 62 51.6
TWI15G0330 Tripterygium wilfordii HOM05D000150 ORTHO05D000108 4.4e-07 57.8 62 50.0
Eucgr.H00279 Eucalyptus grandis HOM05D000150 ORTHO05D000108 5.8e-07 57.4 61 50.8
MELO3C018700.2 Cucumis melo HOM05D000150 ORTHO05D000108 7.5e-07 57.0 56 53.6
CsaV3_7G006010 Cucumis sativus L. HOM05D000150 ORTHO05D000108 7.5e-07 57.0 56 53.6
Hma1.2p1_0108F.1_g051910 Hydrangea macrophylla HOM05D000150 ORTHO05D000108 7.5e-07 57.0 67 49.3
MD15G1146700 Malus domestica HOM05D000150 ORTHO05D000108 7.5e-07 57.0 62 50.0
Prupe.7G267900 Prunus persica HOM05D000150 ORTHO05D000108 7.5e-07 57.0 54 57.4
CSS0033260 Camellia sinensis var. sinensis HOM05D000150 ORTHO05D000108 9.8e-07 56.6 64 50.0
CiPaw.01G199400 Carya illinoinensis HOM05D000150 ORTHO05D000108 9.8e-07 56.6 63 47.6
Dinv28787 Davidia involucrata HOM05D000150 ORTHO05D000108 9.8e-07 56.6 61 49.2
FvH4_1g00421 Fragaria vesca HOM05D000150 ORTHO05D000108 9.8e-07 56.6 64 48.4
FAN28G1128 Fragaria x ananassa HOM05D000150 ORTHO05D000108 9.8e-07 56.6 64 48.4
RcHm_v2.0_Chr7g0212611 Rosa chinensis HOM05D000150 ORTHO05D000108 9.8e-07 56.6 64 48.4
CSS0031957 Camellia sinensis var. sinensis HOM05D000150 ORTHO05D000108 1.7e-06 55.8 56 48.2
CSS0045393 Camellia sinensis var. sinensis HOM05D000150 ORTHO05D000108 1.7e-06 55.8 64 48.4
Dinv24905 Davidia involucrata HOM05D000150 ORTHO05D000108 1.7e-06 55.8 50 54.0
Rhsim02G0087400 Rhododendron simsii HOM05D000150 ORTHO05D000108 1.7e-06 55.8 54 59.3
Rhsim02G0087500 Rhododendron simsii HOM05D000150 ORTHO05D000108 1.7e-06 55.8 54 59.3
Solyc08g062220.3 Solanum lycopersicum HOM05D000150 ORTHO05D000108 1.7e-06 55.8 54 50.0
Sopen08g017830 Solanum pennellii HOM05D000150 ORTHO05D000108 1.7e-06 55.8 54 50.0
Rhsim02G0086500 Rhododendron simsii HOM05D000150 ORTHO05D000108 2.2e-06 55.5 54 59.3
Rhsim02G0086700 Rhododendron simsii HOM05D000150 ORTHO05D000108 2.2e-06 55.5 54 59.3
RcHm_v2.0_Chr2g0084921 Rosa chinensis HOM05D000150 ORTHO05D000108 2.2e-06 55.5 64 48.4
PGSC0003DMG400021738 Solanum tuberosum HOM05D000150 ORTHO05D000108 2.2e-06 55.5 51 52.9
TWI15G1039 Tripterygium wilfordii HOM05D000150 ORTHO05D000108 2.2e-06 55.5 62 48.4
EL10Ac3g06127 Beta vulgaris HOM05D000150 ORTHO05D000108 2.9e-06 55.1 59 47.5
CSS0016698 Camellia sinensis var. sinensis HOM05D000150 ORTHO05D000108 2.9e-06 55.1 56 48.2
CSS0027481 Camellia sinensis var. sinensis HOM05D000150 ORTHO05D000108 2.9e-06 55.1 56 48.2
Migut.G00836 Erythranthe guttata HOM05D000150 ORTHO05D000108 2.9e-06 55.1 55 49.1
Migut.G00840 Erythranthe guttata HOM05D000150 ORTHO05D000108 2.9e-06 55.1 67 47.8
Migut.G00842 Erythranthe guttata HOM05D000150 ORTHO05D000108 2.9e-06 55.1 55 49.1
MD10G1111000 Malus domestica HOM05D000150 ORTHO05D000108 2.9e-06 55.1 59 47.5
Rhsim06G0014100 Rhododendron simsii HOM05D000150 ORTHO05D338406 2.9e-06 55.1 54 53.7
GSVIVG01038200001 Vitis vinifera HOM05D000150 ORTHO05D000108 2.9e-06 55.1 51 56.9
Haze_03514 Corylus avellana HOM05D000150 ORTHO05D000108 3.7e-06 54.7 61 42.6
Cfa010581 Carpinus fangiana HOM05D000150 ORTHO05D000108 6.4e-06 53.9 57 45.6
Gohir.A02G007100 Gossypium hirsutum HOM05D000150 ORTHO05D000108 6.4e-06 53.9 64 48.4
Rhsim12G0050400 Rhododendron simsii HOM05D000150 ORTHO05D000108 6.4e-06 53.9 48 56.2
Cpa.g.sc601.4 Carica papaya HOM05D000150 ORTHO05D000108 8.3e-06 53.5 61 55.7
SalBow1G1771 Salvia bowleyana HOM05D000150 ORTHO05D000108 8.3e-06 53.5 55 45.5
vmacro15706 Vaccinium macrocarpon HOM05D000150 ORTHO05D000108 8.3e-06 53.5 54 53.7


User provided reference genes

Program Settings