Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 0.0e+00 1088.9 525 100.0
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 2.8e-246 855.1 511 80.2
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.9e-240 834.7 501 79.8
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 1.1e-237 826.6 504 78.4
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 3.2e-234 815.1 504 76.6
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 1.2e-233 813.1 511 76.1
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 1.3e-232 809.7 505 76.2
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 3.9e-232 808.1 505 76.2
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 3.9e-232 808.1 504 76.6
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 7.3e-231 803.9 503 76.1
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 9.6e-231 803.5 508 76.6
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.2e-230 803.1 514 75.3
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.6e-230 802.7 510 74.5
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.1e-230 802.4 510 74.5
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 2.1e-230 802.4 510 74.7
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 4.7e-230 801.2 507 75.9
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 1.8e-229 799.3 518 74.5
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 8.9e-229 797.0 514 73.9
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 7.6e-228 793.9 517 75.2
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 1.3e-227 793.1 508 75.0
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 1.3e-227 793.1 506 76.1
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 2.2e-227 792.3 504 74.8
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 2.9e-227 792.0 508 74.8
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 7.1e-226 787.3 509 74.9
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 1.6e-225 786.2 504 74.2
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 2.7e-225 785.4 467 80.7
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.0e-224 783.5 514 72.6
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.1e-224 781.2 514 72.6
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 5.1e-224 781.2 518 72.4
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 8.7e-224 780.4 484 75.6
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.1e-223 780.0 514 73.9
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 5.6e-223 777.7 513 74.3
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.3e-222 776.5 514 73.0
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 1.4e-221 773.1 513 72.9
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 9.0e-221 770.4 514 72.6
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 3.4e-220 768.5 491 73.5
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 7.6e-220 767.3 512 74.0
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 1.3e-219 766.5 482 74.7
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 2.9e-219 765.4 508 71.3
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 8.4e-219 763.8 514 71.6
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 1.4e-218 763.1 500 72.6
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 4.2e-218 761.5 502 72.5
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 2.1e-217 759.2 503 71.6
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 6.0e-217 757.7 525 69.5
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 1.0e-216 756.9 485 72.8
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 1.7e-216 756.1 504 71.6
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 3.0e-216 755.4 517 69.6
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 3.9e-216 755.0 510 71.0
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 1.1e-215 753.4 486 72.8
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.5e-215 753.1 511 71.0
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.5e-215 753.1 503 71.2
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 5.6e-215 751.1 510 70.0
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 7.3e-215 750.7 506 70.8
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 2.8e-214 748.8 485 72.4
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 2.8e-214 748.8 485 72.4
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 3.6e-214 748.4 500 71.4
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 6.2e-214 747.7 474 75.7
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.1e-213 746.9 506 70.8
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.4e-213 746.5 512 69.5
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 2.4e-213 745.7 508 69.7
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 4.0e-213 745.0 509 69.4
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 4.0e-213 745.0 507 69.8
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 4.0e-213 745.0 452 77.9
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 5.3e-213 744.6 491 71.3
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 1.2e-212 743.4 499 71.7
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 1.2e-212 743.4 519 68.4
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 3.4e-212 741.9 495 71.3
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 3.8e-211 738.4 483 71.2
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 7.1e-210 734.2 519 67.8
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 3.9e-208 728.4 502 70.3
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 4.3e-207 724.9 471 72.8
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 7.6e-204 714.1 510 67.3
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.3e-203 713.4 490 70.6
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 2.2e-203 712.6 525 66.7
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 3.8e-203 711.8 457 74.2
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 2.5e-202 709.1 487 68.8
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 9.3e-202 707.2 478 69.0
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 6.0e-201 704.5 508 67.1
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.0e-200 703.7 457 72.9
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 1.3e-200 703.4 507 66.7
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 7.4e-199 697.6 503 67.8
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 1.6e-198 696.4 506 66.8
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 8.2e-198 694.1 506 68.8
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 1.4e-197 693.3 514 65.8
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 4.1e-197 691.8 506 66.4
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 4.1e-197 691.8 506 66.6
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 4.1e-197 691.8 506 66.4
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 7.6e-196 687.6 494 67.8
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 1.3e-195 686.8 505 66.5
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 6.5e-195 684.5 506 64.6
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 6.5e-195 684.5 493 66.7
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 6.7e-192 674.5 516 63.8
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 1.6e-190 669.8 553 61.3
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 3.4e-180 635.6 482 64.9
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 1.8e-176 623.2 507 61.9
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 6.3e-166 588.2 485 56.1
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 9.4e-154 547.7 387 67.2
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 2.3e-144 516.5 372 67.5
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 3.2e-141 506.1 343 69.1
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 1.0e-139 501.1 339 70.8
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 6.0e-132 475.3 369 62.3
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.1e-120 436.4 493 50.3
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.2e-119 434.5 311 67.2
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.9e-117 427.2 310 65.8
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 8.4e-94 348.6 256 61.7
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 1.2e-84 318.2 213 64.8
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.2e-77 293.1 174 78.2
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 9.7e-74 282.0 184 72.3
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 3.2e-61 240.4 146 78.1
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 3.5e-55 220.3 148 64.2
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 5.9e-23 113.2 104 56.7
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.9e-16 91.7 52 75.0
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 8.1e-12 76.3 79 50.6
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.5e-10 72.0 78 50.0


User provided reference genes

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