Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 1.9e-141 505.8 241 100.0
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 3.4e-82 308.9 182 76.9
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 3.4e-82 308.9 182 76.9
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 2.2e-81 306.2 183 76.0
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 6.4e-81 304.7 183 77.0
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 2.4e-80 302.8 182 75.3
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 3.5e-79 298.9 183 73.8
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 6.0e-79 298.1 183 74.3
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 7.8e-79 297.7 183 74.9
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 7.8e-79 297.7 182 72.5
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 3.9e-78 295.4 183 74.9
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 5.1e-78 295.0 183 74.9
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 1.1e-77 293.9 183 73.2
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 1.9e-77 293.1 183 73.8
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 3.3e-77 292.4 183 73.2
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 7.3e-77 291.2 183 72.1
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.2e-76 290.4 183 71.6
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 2.1e-76 289.7 183 69.9
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.1e-76 289.7 183 72.7
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 4.7e-76 288.5 185 70.8
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 6.2e-76 288.1 183 73.8
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.4e-75 287.0 183 69.9
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 1.8e-75 286.6 183 70.5
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 1.8e-75 286.6 183 73.2
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 3.1e-75 285.8 183 72.7
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 4.0e-75 285.4 183 72.1
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 5.2e-75 285.0 184 72.8
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 6.8e-75 284.6 183 71.6
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 8.9e-75 284.3 184 70.7
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 8.9e-75 284.3 183 71.0
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.2e-74 283.9 220 61.8
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 2.0e-74 283.1 183 69.4
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.0e-74 283.1 183 71.0
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 2.0e-74 283.1 184 72.3
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 2.6e-74 282.7 183 71.0
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.6e-74 282.7 183 68.9
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 9.9e-74 280.8 183 69.9
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 9.9e-74 280.8 183 69.4
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 1.3e-73 280.4 185 70.8
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 2.2e-73 279.6 183 69.9
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 2.9e-73 279.3 183 66.7
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 3.8e-73 278.9 185 69.7
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 3.8e-73 278.9 183 68.9
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 4.9e-73 278.5 185 71.9
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 4.9e-73 278.5 183 71.6
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 6.4e-73 278.1 186 67.7
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 8.4e-73 277.7 183 69.4
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 1.4e-72 276.9 183 68.3
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 1.4e-72 276.9 183 68.9
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.9e-72 276.6 183 70.5
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 2.4e-72 276.2 185 69.2
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 2.4e-72 276.2 183 67.2
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 4.2e-72 275.4 182 69.8
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 4.2e-72 275.4 183 66.7
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 5.4e-72 275.0 183 68.3
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 5.4e-72 275.0 183 68.9
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 7.1e-72 274.6 184 68.5
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 2.1e-71 273.1 183 68.9
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 2.1e-71 273.1 183 69.4
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 2.7e-71 272.7 183 69.4
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 3.5e-71 272.3 185 68.1
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 6.0e-71 271.6 183 68.3
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 1.0e-70 270.8 183 69.4
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 1.7e-70 270.0 183 67.2
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 2.3e-70 269.6 183 65.6
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 3.9e-70 268.9 183 68.3
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 6.6e-70 268.1 185 67.6
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 1.5e-69 266.9 189 66.7
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.9e-69 266.5 184 67.4
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 2.5e-69 266.2 187 66.8
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 2.5e-69 266.2 184 67.9
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 3.3e-69 265.8 189 66.1
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 3.3e-69 265.8 183 68.3
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 9.6e-69 264.2 184 67.4
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.6e-68 263.5 183 65.6
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 2.1e-68 263.1 192 66.7
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 2.8e-68 262.7 183 62.3
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 3.6e-68 262.3 184 67.9
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.8e-68 261.9 183 65.6
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 8.1e-68 261.2 186 64.5
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 8.1e-68 261.2 183 65.6
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 6.9e-67 258.1 184 66.3
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 6.9e-67 258.1 184 66.3
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 6.9e-67 258.1 184 66.3
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 6.9e-67 258.1 183 63.4
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 6.9e-67 258.1 183 65.0
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 9.0e-67 257.7 183 62.8
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 9.0e-67 257.7 185 65.9
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.5e-66 256.9 183 64.5
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.5e-66 256.9 183 64.5
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 2.0e-66 256.5 183 66.1
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.6e-66 256.1 183 64.5
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 1.7e-65 253.4 184 66.3
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 2.9e-65 252.7 184 66.3
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 2.9e-65 252.7 183 63.4
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.1e-64 250.8 183 60.7
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 2.4e-64 249.6 206 60.7
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 1.2e-63 247.3 183 60.1
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.5e-61 240.4 183 60.1
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.5e-61 239.6 183 60.1
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.5e-61 239.6 183 60.1
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 8.1e-60 234.6 192 64.1
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 7.9e-55 218.0 183 49.2
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 5.3e-51 205.3 136 64.0
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 1.2e-50 204.1 132 65.2
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 9.0e-35 151.4 183 44.8
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 3.0e-22 109.8 104 55.8
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 1.3e-20 104.4 66 63.6
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.7e-20 102.8 187 35.3
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 9.7e-13 78.2 51 68.6
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 8.2e-12 75.1 78 47.4


User provided reference genes

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