Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 5.5e-129 466.5 745 100.0
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 1.2e-91 342.4 745 91.3
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 1.9e-89 335.1 745 91.3
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 5.2e-71 273.9 735 83.5
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 9.9e-70 269.6 745 83.4
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 9.2e-68 263.1 745 82.6
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 2.1e-67 261.9 686 93.0
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 4.6e-67 260.8 178 73.0
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 3.9e-66 257.7 177 74.0
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 6.6e-66 256.9 178 74.7
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 8.6e-66 256.5 745 82.4
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 1.1e-65 256.1 177 75.1
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 1.5e-65 255.8 178 77.0
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.9e-65 255.4 746 81.5
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 3.3e-65 254.6 746 69.3
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 3.3e-65 254.6 178 74.2
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 9.5e-65 253.1 178 73.0
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.6e-64 252.3 179 73.7
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 2.1e-64 251.9 745 82.3
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 3.6e-64 251.1 178 72.5
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 3.6e-64 251.1 739 82.3
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 4.7e-64 250.8 745 81.7
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 6.2e-64 250.4 179 72.6
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 8.1e-64 250.0 178 73.6
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 1.8e-63 248.8 175 70.9
Cpa.g.sc148.18 Carica papaya HOM05D006008 ORTHO05D007334 1.8e-63 248.8 179 70.9
CANSAT56G1562 Cannabis sativa HOM05D006008 ORTHO05D007334 6.8e-63 246.9 179 72.6
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 6.8e-63 246.9 172 74.4
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 1.5e-62 245.7 172 72.7
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 2.6e-62 245.0 745 81.9
FAN20G2406 Fragaria x ananassa HOM05D006008 ORTHO05D007334 4.4e-62 244.2 179 71.5
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 4.9e-61 240.7 172 71.5
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 8.4e-61 240.0 179 70.9
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 8.4e-61 240.0 178 68.5
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 8.4e-61 240.0 165 74.5
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 1.4e-60 239.2 178 69.7
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 2.4e-60 238.4 178 66.9
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 2.4e-60 238.4 170 70.6
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 3.2e-60 238.0 178 66.9
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 7.1e-60 236.9 178 68.5
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.2e-59 236.1 149 79.2
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.2e-59 236.1 149 79.2
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 1.2e-59 236.1 166 72.9
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 1.2e-59 236.1 178 69.7
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 2.7e-59 235.0 178 67.4
CANSAT21G2303 Cannabis sativa HOM05D006008 ORTHO05D007334 3.5e-59 234.6 168 70.2
Lalb_Chr23g0268201 Lupinus albus HOM05D006008 ORTHO05D007334 1.7e-58 232.3 171 70.2
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 2.3e-58 231.9 166 71.1
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 2.3e-58 231.9 166 71.1
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 5.1e-58 230.7 165 70.3
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 6.6e-58 230.3 161 70.8
CANSAT21G0760 Cannabis sativa HOM05D006008 ORTHO05D007334 8.7e-58 229.9 166 68.7
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 8.7e-58 229.9 163 72.4
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 1.9e-57 228.8 170 68.8
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 1.9e-57 228.8 728 82.1
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 3.3e-57 228.0 168 67.3
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 5.6e-57 227.3 155 72.3
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 1.2e-56 226.1 168 67.3
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 2.1e-56 225.3 744 82.0
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 4.7e-56 224.2 158 70.3
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 8.1e-56 223.4 170 68.2
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 1.1e-55 223.0 166 69.3
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 2.4e-55 221.9 163 68.7
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 2.4e-55 221.9 172 67.4
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 2.0e-54 218.8 172 64.5
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 2.6e-54 218.4 176 64.8
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 2.6e-54 218.4 739 79.8
CANSAT80G2648 Cannabis sativa HOM05D006008 ORTHO05D007334 3.4e-54 218.0 179 65.4
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 1.3e-53 216.1 168 65.5
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 2.2e-53 215.3 174 64.4
CANSAT54G0183 Cannabis sativa HOM05D006008 ORTHO05D007334 3.8e-53 214.5 173 66.5
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 4.9e-53 214.2 173 62.4
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 6.4e-53 213.8 157 68.8
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 9.3e-52 209.9 179 66.5
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 1.2e-51 209.5 745 80.3
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 6.0e-51 207.2 178 62.9
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 6.0e-51 207.2 165 64.2
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 1.0e-50 206.5 170 62.4
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 1.0e-50 206.5 170 61.8
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 5.1e-50 204.1 179 64.8
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.1e-49 203.0 179 63.1
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 1.4e-44 186.0 143 66.4
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 1.4e-44 186.0 139 65.5
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 2.1e-43 182.2 120 77.5
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 1.0e-42 179.9 120 78.3
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 2.3e-42 178.7 151 60.3
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 3.0e-42 178.3 147 62.6
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 1.1e-41 176.4 107 82.2
FAN20G1003 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.9e-41 175.6 149 56.4
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 2.5e-41 175.3 156 59.6
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 2.5e-41 175.3 156 59.6
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 3.3e-41 174.9 175 52.6
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 3.3e-41 174.9 155 54.2
Nn7g36097 Nelumbo nucifera HOM05D006008 ORTHO05D007334 1.6e-40 172.6 140 65.0
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.8e-40 171.8 130 69.2
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 2.8e-40 171.8 131 66.4
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 4.8e-40 171.0 145 59.3
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 3.1e-39 168.3 134 63.4
CsaV3_4G036480 Cucumis sativus L. HOM05D006008 ORTHO05D007334 4.0e-39 167.9 151 53.0
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 9.0e-39 166.8 151 58.9
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 1.5e-38 166.0 154 57.8
CSS0039067 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.0e-38 165.6 179 55.9
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 3.4e-38 164.9 126 66.7
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 7.6e-38 163.7 137 61.3
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 1.3e-37 162.9 140 58.6
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 1.1e-36 159.8 127 65.4
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 2.5e-36 158.7 107 73.8
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 1.2e-35 156.4 144 56.9
Lalb_Chr23g0268191 Lupinus albus HOM05D006008 ORTHO05D007334 1.2e-35 156.4 153 50.3
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 2.1e-35 155.6 142 57.0
Glyma.04G060500 Glycine max HOM05D006008 ORTHO05D007334 3.5e-35 154.8 160 49.4
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 1.3e-34 152.9 134 59.0
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 5.1e-34 151.0 135 58.5
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 1.1e-33 149.8 137 56.2
ATR0180G020 Amborella trichopoda HOM05D006008 ORTHO05D007334 1.6e-32 146.0 139 56.8
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 4.8e-32 144.4 138 52.2
CSS0031354 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 5.3e-31 141.0 108 57.4
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 9.0e-31 140.2 128 55.5
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 2.0e-30 139.0 108 65.7
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 2.5e-28 132.1 123 62.6
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 1.8e-26 125.9 140 50.7
SEGI_41266 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 1.8e-26 125.9 157 46.5
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 3.9e-26 124.8 107 61.7
Nn7g36096 Nelumbo nucifera HOM05D006008 ORTHO05D007334 2.2e-24 119.0 147 40.1
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 5.3e-23 114.4 104 58.7
BcaNung03118 Brassica carinata HOM05D006008 ORTHO05D007334 2.2e-21 109.0 147 40.8
SEGI_02316 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 1.1e-20 106.7 124 48.4
HPP92_017173 Vanilla planifolia HOM05D006008 ORTHO05D007334 2.0e-17 95.9 150 35.3
BcaNung03117 Brassica carinata HOM05D006008 ORTHO05D007334 5.0e-13 81.3 68 61.8
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 2.1e-11 75.9 38 100.0
THA.LOC104807228 Tarenaya hassleriana HOM05D003056 ORTHO05D003422 5.3e-07 61.2 174 27.6
Lj5P134T43 Lonicera japonica HOM05D005362 ORTHO05D006895 4.5e-06 58.2 119 31.9


User provided reference genes

Program Settings