Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 5.1e-114 414.5 215 100.0
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 2.1e-75 286.2 215 67.9
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 8.0e-75 284.3 218 72.5
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 8.8e-74 280.8 221 71.9
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 8.8e-74 280.8 215 68.8
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 5.7e-73 278.1 216 69.4
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 3.7e-72 275.4 219 67.1
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 4.5e-70 268.5 216 66.7
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 3.8e-69 265.4 219 66.7
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 5.0e-69 265.0 218 64.7
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 1.1e-68 263.8 216 64.8
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 1.9e-68 263.1 219 64.4
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 2.1e-67 259.6 219 66.2
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 4.7e-67 258.5 220 66.4
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 6.1e-67 258.1 217 65.4
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.8e-66 256.5 219 65.8
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 6.8e-66 254.6 215 64.2
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 2.0e-65 253.1 217 62.7
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 4.9e-64 248.4 216 64.4
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 1.4e-63 246.9 215 62.3
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 3.1e-63 245.7 220 63.6
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 5.4e-63 245.0 220 63.2
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 1.3e-61 240.4 217 61.3
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 1.3e-61 240.4 219 62.1
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 2.3e-61 239.6 217 60.8
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 3.8e-61 238.8 220 62.3
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 5.0e-61 238.4 224 61.2
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.5e-60 236.9 239 58.6
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 1.5e-60 236.9 217 61.3
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 1.2e-59 233.8 219 60.7
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 2.3e-58 229.6 218 60.6
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 3.0e-58 229.2 167 67.1
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 5.2e-58 228.4 215 62.3
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 1.5e-57 226.9 214 57.9
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 4.4e-57 225.3 215 57.7
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 7.5e-57 224.6 228 55.7
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 1.7e-56 223.4 207 60.4
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 2.9e-56 222.6 206 61.2
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 8.3e-56 221.1 217 57.6
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 2.4e-55 219.5 182 62.1
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 3.2e-55 219.2 216 56.9
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 4.1e-55 218.8 220 54.5
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 2.0e-54 216.5 175 63.4
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 3.5e-54 215.7 184 63.6
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 5.9e-54 214.9 223 55.2
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 1.3e-53 213.8 172 62.2
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 1.3e-53 213.8 184 63.0
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 2.3e-53 213.0 172 62.2
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.3e-53 213.0 203 59.1
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 3.0e-53 212.6 216 57.4
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 5.0e-53 211.8 228 53.5
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 5.0e-53 211.8 190 64.2
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 6.6e-53 211.5 219 54.3
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.1e-52 210.7 223 55.2
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 4.3e-52 208.8 172 61.0
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 5.6e-52 208.4 172 61.0
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 5.6e-52 208.4 172 61.0
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 5.6e-52 208.4 172 61.0
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 1.2e-51 207.2 172 61.0
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 2.1e-51 206.5 173 60.7
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 3.6e-51 205.7 194 57.2
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 8.0e-51 204.5 218 53.7
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 1.4e-50 203.8 212 53.3
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 3.1e-50 202.6 187 59.4
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 3.1e-50 202.6 172 59.3
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 5.2e-50 201.8 212 53.3
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 1.2e-49 200.7 172 58.7
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 1.2e-49 200.7 213 52.6
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 1.5e-49 200.3 223 51.6
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 2.0e-49 199.9 214 51.9
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 2.0e-49 199.9 153 68.0
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 2.6e-49 199.5 175 60.6
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 1.7e-48 196.8 227 48.9
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 2.7e-46 189.5 229 49.8
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 7.8e-46 188.0 127 70.9
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 1.5e-44 183.7 225 51.1
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 5.6e-44 181.8 231 50.2
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 9.5e-44 181.0 148 63.5
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 1.6e-43 180.3 189 55.6
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 1.4e-42 177.2 215 47.0
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 1.8e-42 176.8 190 57.4
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 4.0e-42 175.6 168 56.5
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 2.0e-41 173.3 226 50.0
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 2.0e-41 173.3 261 42.9
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.3e-40 170.6 225 44.9
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 2.9e-40 169.5 232 47.4
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 6.4e-40 168.3 233 47.2
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 1.4e-39 167.2 127 66.9
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 5.4e-39 165.2 164 57.3
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 3.5e-38 162.5 171 50.9
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 7.8e-38 161.4 154 58.4
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 3.9e-37 159.1 233 46.4
Haze_18114 Corylus avellana HOM05D007388 ORTHO05D009421 3.1e-26 122.9 87 81.6
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 1.1e-23 114.4 178 41.6
QL07p047550 Quercus lobata HOM05D007388 ORTHO05D009421 1.2e-22 110.9 86 75.6
QL11p041786 Quercus lobata HOM05D007388 ORTHO05D009421 3.5e-22 109.4 86 74.4
QL11p041555 Quercus lobata HOM05D007388 ORTHO05D009421 4.6e-22 109.0 86 74.4
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 2.3e-21 106.7 133 48.9
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 5.1e-21 105.5 87 63.2
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 4.8e-19 99.0 172 40.1
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 2.4e-18 96.7 161 41.0
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 2.5e-12 76.6 183 32.2
FAN15G1408 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.1e-10 71.2 94 56.4
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 4.5e-09 65.9 65 52.3
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 1.9e-07 60.5 97 38.1
Mapoly0007s0106 Marchantia polymorpha HOM05D007480 ORTHO05D009460 2.7e-06 56.6 138 35.5


User provided reference genes

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