Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.5e-267 925.6 458 100.0
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 2.3e-220 768.8 458 81.7
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 7.6e-216 753.8 458 80.6
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.7e-207 726.1 434 80.4
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 4.2e-198 694.9 451 73.8
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 1.9e-195 686.0 434 75.1
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.9e-195 686.0 452 72.6
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.1e-193 680.2 467 72.6
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 1.7e-191 672.9 430 74.7
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 9.3e-190 667.2 459 70.4
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 7.9e-189 664.1 453 69.8
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 4.3e-187 658.3 432 72.2
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 4.3e-187 658.3 432 70.6
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.3e-186 656.8 433 72.5
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.3e-186 656.8 430 72.3
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 1.5e-184 649.8 451 69.0
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 2.6e-184 649.0 433 70.7
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 1.4e-182 643.3 460 67.2
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 3.2e-182 642.1 433 72.3
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 5.5e-182 641.3 431 71.0
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 4.6e-181 638.3 428 71.5
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 4.6e-181 638.3 400 75.0
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.0e-180 637.1 441 69.2
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 1.8e-180 636.3 465 66.0
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.0e-180 635.6 441 69.2
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 3.0e-180 635.6 428 71.3
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 5.1e-180 634.8 434 69.4
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 8.2e-178 627.5 441 68.3
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.4e-177 625.9 427 67.2
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 3.1e-177 625.5 458 65.5
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 9.1e-177 624.0 486 63.0
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.6e-176 622.5 433 67.4
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 1.7e-175 619.8 422 68.0
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.4e-174 616.7 456 65.1
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 2.5e-174 615.9 453 64.9
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 7.2e-174 614.4 439 67.4
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 9.4e-174 614.0 445 65.8
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 1.2e-173 613.6 405 70.9
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 2.7e-173 612.5 430 67.7
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 1.8e-172 609.8 448 64.5
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 5.1e-172 608.2 412 69.2
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 6.7e-172 607.8 452 64.6
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 6.7e-172 607.8 433 66.7
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 8.8e-172 607.4 405 71.1
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.1e-171 607.1 433 66.5
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 1.5e-171 606.7 432 66.7
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 2.0e-171 606.3 434 67.7
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 7.4e-171 604.4 435 66.7
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.3e-170 603.6 466 68.2
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 1.4e-169 600.1 434 64.3
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 2.4e-169 599.4 431 66.1
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 2.0e-168 596.3 434 64.5
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.3e-167 593.6 423 65.5
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 5.0e-167 591.7 423 66.0
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 1.1e-166 590.5 434 63.4
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 2.5e-166 589.3 430 64.4
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 2.1e-165 586.3 428 64.0
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 2.1e-165 586.3 428 64.0
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 2.7e-165 585.9 423 65.2
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 6.1e-165 584.7 428 63.8
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 6.1e-165 584.7 411 68.9
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 7.9e-165 584.3 434 62.7
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 7.9e-165 584.3 446 63.9
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.8e-164 583.2 428 66.1
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 3.0e-164 582.4 396 67.4
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 3.0e-164 582.4 433 61.7
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.3e-163 578.9 400 70.0
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 3.7e-162 575.5 458 62.0
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 7.0e-161 571.2 441 63.5
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 5.0e-159 565.1 408 64.2
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 5.2e-156 555.1 428 63.8
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.5e-155 553.5 434 61.1
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.9e-151 539.3 444 59.7
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 6.5e-151 538.1 441 61.0
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 3.2e-150 535.8 468 59.6
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 1.5e-147 526.9 337 75.1
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 3.7e-146 522.3 355 72.4
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.2e-144 517.3 430 59.3
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 4.5e-144 515.4 400 63.2
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 2.9e-143 512.7 332 74.4
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.5e-143 511.5 415 62.7
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.5e-142 509.6 405 63.5
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 3.6e-141 505.8 406 60.8
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 3.7e-138 495.7 407 58.0
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.0e-135 487.6 381 64.0
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 3.3e-134 482.6 336 69.0
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 1.0e-132 477.6 395 57.2
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 1.4e-132 477.2 422 55.9
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 4.4e-131 472.2 324 65.1
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 7.0e-129 464.9 420 54.3
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.2e-125 454.1 335 63.6
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.0e-120 436.8 336 62.2
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.7e-112 409.8 420 49.0
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.5e-94 350.9 226 71.2
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 3.2e-89 333.2 224 68.3
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 6.4e-82 308.9 198 71.7
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 1.0e-79 301.6 236 62.3
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 9.0e-68 261.9 227 59.0
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.5e-58 229.2 149 75.2
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.2e-57 226.9 130 82.3
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 3.3e-54 216.9 383 36.6
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 4.5e-51 206.5 164 61.0
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 3.2e-41 173.7 350 34.0
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 4.8e-37 159.8 133 57.1
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.2e-37 159.1 171 53.8
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.2e-37 159.1 171 53.8
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.8e-36 157.9 170 51.8
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 5.5e-33 146.4 99 68.7
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 3.1e-28 130.6 77 77.9
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 7.0e-20 102.8 63 71.4
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 5.9e-19 99.8 76 65.8
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.4e-12 78.6 207 28.5
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 3.2e-12 77.4 204 29.4
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 7.0e-12 76.3 208 29.3
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 1.5e-09 68.6 380 21.1
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.9e-09 68.2 75 44.0
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 4.4e-06 57.0 77 37.7


User provided reference genes

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