Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 4.8e-150 534.6 303 100.0
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 1.3e-83 313.9 313 61.7
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 5.0e-83 312.0 313 66.8
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 7.0e-77 291.6 310 64.5
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 5.8e-71 271.9 304 59.9
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 2.2e-62 243.4 290 60.0
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 5.4e-61 238.8 322 50.3
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.0e-59 234.6 322 50.0
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 1.3e-59 234.2 316 51.6
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 1.7e-59 233.8 310 51.0
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 1.9e-58 230.3 309 50.2
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 2.5e-58 229.9 310 50.0
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 9.9e-55 218.0 309 48.9
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.4e-53 214.2 313 50.2
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 1.3e-51 207.6 301 55.1
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 1.3e-51 207.6 328 45.1
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 1.7e-51 207.2 303 46.2
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 2.3e-51 206.8 336 43.2
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 5.1e-51 205.7 339 44.8
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 5.1e-51 205.7 309 46.9
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 8.7e-51 204.9 299 49.8
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 1.9e-50 203.8 344 43.3
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.9e-50 203.8 336 42.9
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.9e-50 203.8 294 49.0
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 2.5e-50 203.4 346 42.2
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.3e-50 203.0 298 48.3
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.3e-50 202.6 294 48.6
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 5.6e-50 202.2 301 45.2
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 4.8e-49 199.1 316 46.2
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 8.1e-49 198.4 157 71.3
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.8e-48 197.2 300 52.0
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 4.0e-48 196.1 291 48.8
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 9.0e-48 194.9 305 54.4
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 2.0e-47 193.7 338 45.6
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 4.5e-47 192.6 322 47.8
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 1.3e-46 191.0 322 47.8
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.3e-46 191.0 322 47.8
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 1.7e-46 190.7 297 44.1
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.2e-46 190.3 322 47.8
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 2.9e-46 189.9 293 45.1
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 5.4e-45 185.7 304 50.7
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 1.6e-44 184.1 346 41.3
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 2.1e-44 183.7 298 44.6
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 2.7e-44 183.3 323 49.5
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 4.6e-44 182.6 307 45.3
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 4.6e-44 182.6 303 41.9
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 1.0e-43 181.4 317 47.0
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 1.3e-43 181.0 293 48.1
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 5.1e-43 179.1 292 48.3
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 5.1e-43 179.1 289 45.3
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 6.7e-43 178.7 289 42.6
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 6.7e-43 178.7 307 51.1
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 1.1e-42 177.9 286 45.5
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 1.9e-42 177.2 329 43.2
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 7.4e-42 175.3 156 63.5
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 7.4e-42 175.3 298 44.0
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 2.1e-41 173.7 312 44.2
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 2.1e-41 173.7 289 45.0
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 6.2e-41 172.2 289 44.6
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 1.1e-40 171.4 289 43.3
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.4e-40 171.0 247 49.0
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 2.4e-40 170.2 289 43.6
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.0e-40 169.5 247 48.6
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 6.9e-40 168.7 301 42.2
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 2.6e-39 166.8 318 41.8
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 3.4e-39 166.4 309 42.1
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.6e-36 157.5 223 51.6
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 2.7e-36 156.8 152 64.5
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 2.7e-36 156.8 158 61.4
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 3.5e-36 156.4 312 39.7
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 3.9e-35 152.9 151 59.6
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 6.7e-35 152.1 243 52.7
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 8.7e-35 151.8 315 39.0
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 2.5e-34 150.2 302 37.4
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 3.7e-33 146.4 263 47.5
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 6.9e-32 142.1 320 38.1
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 1.2e-31 141.4 266 45.5
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 2.6e-31 140.2 333 41.7
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.5e-31 139.4 133 63.2
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 1.0e-30 138.3 219 50.2
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 3.8e-30 136.3 302 39.4
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 3.8e-30 136.3 270 46.3
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 4.9e-30 136.0 225 53.3
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 1.1e-29 134.8 308 43.8
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 1.9e-29 134.0 302 39.7
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 3.2e-29 133.3 305 38.7
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 3.2e-29 133.3 305 39.0
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 9.3e-29 131.7 316 38.3
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 1.2e-28 131.3 240 45.0
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 2.7e-28 130.2 293 41.6
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 3.5e-28 129.8 271 43.2
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 4.6e-28 129.4 154 55.2
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 1.0e-27 128.3 267 40.4
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 1.0e-27 128.3 267 40.4
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 1.0e-27 128.3 267 40.4
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 3.9e-27 126.3 222 49.5
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 3.9e-27 126.3 227 41.4
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 8.7e-27 125.2 217 42.9
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 1.1e-26 124.8 286 38.1
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 1.5e-26 124.4 222 42.3
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 3.3e-26 123.2 301 42.9
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 3.3e-26 123.2 178 48.3
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 4.3e-26 122.9 216 42.6
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 7.4e-26 122.1 262 37.4
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 4.8e-25 119.4 292 39.7
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.4e-24 117.1 263 40.3
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.2e-23 114.8 148 53.4
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 3.4e-23 113.2 294 43.5
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.7e-22 110.9 261 39.5
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 2.2e-22 110.5 158 43.7
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 2.9e-22 110.2 317 41.0
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 3.6e-20 103.2 164 45.7
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 3.6e-20 103.2 327 33.0
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 9.7e-18 95.1 87 63.2
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 1.4e-16 91.3 193 37.8
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 6.9e-16 89.0 57 77.2
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 8.5e-14 82.0 82 57.3
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.2e-12 78.2 43 86.0
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.8e-11 74.3 191 34.0
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 3.1e-08 63.5 50 70.0
ECA234G2998 Erigeron canadensis HOM05D006245 ORTHO05D007260 3.1e-08 63.5 174 36.8


User provided reference genes

Program Settings