Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 1.5e-49 199.1 98 100.0
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 5.9e-41 170.6 98 83.7
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.3e-40 169.5 98 85.7
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 2.2e-40 168.7 97 81.4
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 2.2e-40 168.7 99 86.9
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.9e-40 168.3 98 84.7
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 3.8e-40 167.9 95 84.2
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 3.8e-40 167.9 98 81.6
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 5.0e-40 167.5 94 87.2
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 1.1e-39 166.4 97 84.5
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.9e-39 165.6 99 82.8
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.9e-39 165.6 98 82.7
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 1.9e-39 165.6 98 81.6
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 2.5e-39 165.2 99 83.8
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 2.5e-39 165.2 94 84.0
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.5e-39 165.2 94 84.0
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.5e-39 165.2 94 84.0
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 2.5e-39 165.2 96 83.3
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 4.2e-39 164.5 97 81.4
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 4.2e-39 164.5 97 81.4
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 5.5e-39 164.1 98 79.6
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 1.2e-38 162.9 98 76.5
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.6e-38 162.5 96 84.4
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.6e-38 162.5 96 84.4
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 1.6e-38 162.5 96 84.4
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.1e-38 162.2 94 83.0
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 7.9e-38 160.2 97 80.4
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 1.4e-37 159.5 99 76.8
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 1.4e-37 159.5 100 77.0
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 1.8e-37 159.1 90 81.1
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.8e-37 159.1 98 81.6
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.8e-37 159.1 100 77.0
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 3.0e-37 158.3 98 81.6
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 3.0e-37 158.3 95 80.0
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 3.0e-37 158.3 90 81.1
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 5.1e-37 157.5 99 75.8
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 5.1e-37 157.5 97 79.4
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 5.1e-37 157.5 98 73.5
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 8.8e-37 156.8 100 76.0
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 5.7e-36 154.1 100 78.0
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 7.4e-36 153.7 98 75.5
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 7.4e-36 153.7 93 75.3
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 7.4e-36 153.7 98 75.5
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 9.7e-36 153.3 97 75.3
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.7e-35 152.5 91 80.2
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 2.2e-35 152.1 90 77.8
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 2.2e-35 152.1 98 75.5
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.2e-35 152.1 96 78.1
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 3.7e-35 151.4 93 74.2
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 3.7e-35 151.4 91 78.0
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 3.7e-35 151.4 101 73.3
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 4.8e-35 151.0 88 79.5
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 4.8e-35 151.0 97 72.2
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 4.8e-35 151.0 97 72.2
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 1.1e-34 149.8 91 76.9
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 1.8e-34 149.1 98 74.5
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 1.8e-34 149.1 99 69.7
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 2.4e-34 148.7 97 73.2
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 2.4e-34 148.7 98 71.4
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 2.4e-34 148.7 98 71.4
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 2.4e-34 148.7 98 71.4
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 2.4e-34 148.7 98 71.4
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 3.1e-34 148.3 97 72.2
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 4.1e-34 147.9 90 73.3
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 4.1e-34 147.9 99 67.7
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 5.3e-34 147.5 98 70.4
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 5.3e-34 147.5 98 71.4
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 5.3e-34 147.5 98 70.4
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 5.3e-34 147.5 96 69.8
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 5.3e-34 147.5 99 73.7
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 5.3e-34 147.5 91 75.8
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 9.1e-34 146.7 96 74.0
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 9.1e-34 146.7 94 73.4
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 1.2e-33 146.4 97 72.2
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 2.6e-33 145.2 90 74.4
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 5.9e-33 144.1 96 71.9
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 5.9e-33 144.1 96 72.9
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.3e-32 142.9 95 70.5
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 2.2e-32 142.1 98 72.4
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 2.2e-32 142.1 91 74.7
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 2.9e-32 141.7 126 62.7
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 3.8e-32 141.4 99 70.7
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 5.0e-32 141.0 98 66.3
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 5.0e-32 141.0 89 73.0
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 5.0e-32 141.0 91 72.5
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 5.0e-32 141.0 79 81.0
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 6.5e-32 140.6 98 66.3
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 8.5e-32 140.2 98 69.4
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.1e-31 139.8 98 66.3
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.1e-31 139.8 98 66.3
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.1e-31 139.8 94 75.5
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 1.4e-31 139.4 98 65.3
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.4e-31 139.4 98 65.3
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.4e-31 139.4 91 72.5
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 7.2e-31 137.1 79 79.7
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 1.6e-30 136.0 86 73.3
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 3.6e-30 134.8 84 76.2
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 3.6e-30 134.8 103 65.0
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 7.9e-30 133.7 80 81.2
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 5.1e-29 131.0 79 79.7
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 1.1e-28 129.8 83 68.7
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 9.7e-28 126.7 91 60.4
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 9.1e-26 120.2 78 71.8
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.5e-25 119.4 62 91.9
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.5e-25 117.9 97 66.0
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 1.1e-23 113.2 81 67.9
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 2.1e-22 109.0 90 61.1
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.5e-20 102.8 79 62.0
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 7.4e-20 100.5 93 53.8
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 1.7e-19 99.4 71 63.4
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 7.7e-17 90.5 79 53.2
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.5e-15 85.5 116 46.6
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 4.0e-13 78.2 79 54.4
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.6e-12 75.5 44 77.3
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 1.7e-11 72.8 74 54.1
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.7e-11 72.8 60 60.0
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.5e-09 65.1 38 73.7
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 8.5e-08 60.5 41 73.2
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 1.1e-07 60.1 53 50.9


User provided reference genes

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