Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 5.4e-153 544.3 269 100.0
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 9.3e-105 384.0 273 74.7
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 3.5e-104 382.1 273 73.3
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 7.6e-99 364.4 290 68.3
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 7.6e-91 337.8 278 62.9
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 1.4e-89 333.6 220 70.0
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.6e-88 330.1 277 64.3
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 8.7e-87 324.3 275 63.6
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 8.7e-87 324.3 221 69.2
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 9.6e-86 320.9 243 64.6
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.1e-85 319.7 283 59.4
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 6.2e-85 318.2 275 61.5
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 1.4e-84 317.0 277 61.4
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 9.0e-84 314.3 273 61.9
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 3.4e-83 312.4 220 70.5
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 7.6e-83 311.2 197 73.6
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.0e-82 310.8 187 76.5
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 3.8e-82 308.9 225 64.4
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 8.4e-82 307.8 272 59.6
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 1.9e-81 306.6 229 64.2
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 7.9e-80 301.2 218 67.4
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 1.3e-79 300.4 276 59.8
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 1.8e-79 300.1 217 65.4
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 3.9e-79 298.9 192 70.8
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 6.7e-79 298.1 219 64.4
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 8.7e-79 297.7 218 67.0
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 8.7e-79 297.7 214 65.9
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.5e-78 297.0 218 66.5
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 1.9e-78 296.6 270 55.9
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 2.5e-78 296.2 214 63.6
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 3.3e-78 295.8 274 57.7
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 4.3e-78 295.4 282 53.9
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 2.1e-77 293.1 214 67.8
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 2.1e-77 293.1 193 70.5
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.1e-77 293.1 307 54.7
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 2.8e-77 292.7 227 66.1
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 2.8e-77 292.7 273 58.2
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.8e-77 292.7 219 60.7
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 2.8e-77 292.7 238 58.4
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 4.8e-77 292.0 211 68.7
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 8.2e-77 291.2 210 63.8
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 1.1e-76 290.8 201 68.2
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 1.4e-76 290.4 248 60.5
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 1.4e-76 290.4 206 68.4
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 1.4e-76 290.4 218 64.7
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 1.8e-76 290.0 213 68.5
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 1.8e-76 290.0 219 62.6
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 2.4e-76 289.7 203 67.0
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 2.4e-76 289.7 217 62.7
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 3.1e-76 289.3 217 62.7
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 4.1e-76 288.9 270 53.3
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 4.1e-76 288.9 239 61.9
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 5.3e-76 288.5 186 72.0
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 6.9e-76 288.1 195 70.8
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 9.0e-76 287.7 219 63.5
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 9.0e-76 287.7 268 58.6
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 3.4e-75 285.8 241 59.3
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 3.4e-75 285.8 195 70.3
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 4.5e-75 285.4 195 69.7
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 7.6e-75 284.6 193 68.9
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.0e-74 284.3 200 66.5
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.0e-74 284.3 217 61.8
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 2.2e-74 283.1 274 54.0
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 2.2e-74 283.1 220 60.9
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 2.2e-74 283.1 265 54.7
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 2.2e-74 283.1 270 54.4
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 8.5e-74 281.2 240 60.4
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 1.1e-73 280.8 165 76.4
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 4.2e-73 278.9 211 67.3
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 5.5e-73 278.5 195 67.7
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 5.5e-73 278.5 215 60.9
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 9.3e-73 277.7 222 59.9
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 1.6e-72 276.9 208 64.4
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.6e-72 276.9 246 58.5
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.1e-72 276.6 279 56.3
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 2.7e-72 276.2 279 53.0
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 2.7e-72 276.2 161 77.0
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.6e-72 275.8 269 57.6
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 4.6e-72 275.4 209 63.6
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 6.1e-72 275.0 194 69.6
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 3.0e-71 272.7 168 72.0
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 6.7e-71 271.6 174 71.8
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 5.7e-70 268.5 215 62.3
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 7.4e-70 268.1 220 61.4
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 2.2e-69 266.5 276 51.8
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 4.8e-69 265.4 218 62.8
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.8e-68 263.5 224 58.5
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 2.4e-68 263.1 183 66.7
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 4.1e-68 262.3 162 73.5
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 3.8e-66 255.8 198 62.6
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 5.0e-66 255.4 193 62.7
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 1.4e-65 253.8 234 53.4
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 1.4e-65 253.8 165 67.9
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 1.8e-63 246.9 325 44.0
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 3.3e-62 242.7 190 59.5
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 2.2e-61 240.0 235 49.8
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 7.9e-56 221.5 208 54.3
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 4.4e-54 215.7 120 78.3
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 1.1e-49 201.1 233 42.9
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 3.2e-49 199.5 206 44.7
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 7.0e-44 181.8 191 44.0
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 4.5e-43 179.1 132 66.7
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 3.5e-35 152.9 162 40.7
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 3.5e-35 152.9 148 54.7
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 5.5e-33 145.6 157 42.0
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.6e-30 136.7 117 60.7
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 6.6e-26 122.1 82 63.4
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.3e-23 113.6 80 65.0
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 3.0e-23 113.2 193 35.8
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 2.7e-19 100.1 197 29.4
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-18 96.7 77 58.4
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 2.5e-17 93.6 162 32.1
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 2.7e-11 73.6 101 46.5
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 1.5e-09 67.8 51 56.9
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 1.4e-07 61.2 94 39.4
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 1.2e-06 58.2 32 75.0


User provided reference genes

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