Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p015306 Quercus lobata HOM05D005680 ORTHO05D006334 1.0e-41 172.9 86 100.0
TAR628G1700 Trochodendron aralioides HOM05D005680 ORTHO05D006334 2.7e-21 105.1 81 69.1
Atru.chr13.75 Acer truncatum HOM05D005680 ORTHO05D006334 2.2e-20 102.1 87 59.8
TAR376G0914 Trochodendron aralioides HOM05D005680 ORTHO05D006334 6.5e-20 100.5 88 62.5
Sabra02G0004200 Salix brachista HOM05D005680 ORTHO05D006334 3.2e-19 98.2 86 57.0
Potri.002G006000 Populus trichocarpa HOM05D005680 ORTHO05D006334 2.7e-18 95.1 83 57.8
Aqoxy507s001 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 2.3e-17 92.0 80 58.8
Aqoxy5G00968 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 2.3e-17 92.0 80 58.8
SHI12592 Sapria himalayana HOM05D005680 ORTHO05D006334 2.0e-16 89.0 86 52.3
PGR031G2681 Punica granatum HOM05D005680 ORTHO05D006334 2.6e-16 88.6 56 73.2
Nn1g04629 Nelumbo nucifera HOM05D005680 ORTHO05D006334 3.4e-16 88.2 88 55.7
ClCG11G018960 Citrullus lanatus HOM05D005680 ORTHO05D006334 1.7e-15 85.9 88 55.7
Manes.12G112300 Manihot esculenta HOM05D005680 ORTHO05D006334 1.7e-15 85.9 91 56.0
MELO3C017050.2 Cucumis melo HOM05D005680 ORTHO05D006334 6.3e-15 84.0 71 60.6
Sed0000508 Sechium edule HOM05D005680 ORTHO05D006334 1.1e-14 83.2 88 56.8
Dinv38141 Davidia involucrata HOM05D000032 ORTHO05D004656 1.8e-14 82.4 71 63.4
Cpa.g.sc88.61 Carica papaya HOM05D005680 ORTHO05D006334 3.1e-14 81.6 84 51.2
Thecc.01G068000 Theobroma cacao HOM05D005680 ORTHO05D006334 3.1e-14 81.6 88 51.1
Haze_15319 Corylus avellana HOM05D005680 ORTHO05D006334 4.1e-14 81.3 87 50.6
Haze_22851 Corylus avellana HOM05D005680 ORTHO05D006334 5.4e-14 80.9 80 60.0
CsaV3_4G037560 Cucumis sativus L. HOM05D005680 ORTHO05D006334 5.4e-14 80.9 87 54.0
Cfa014129 Carpinus fangiana HOM05D005680 ORTHO05D006334 7.0e-14 80.5 73 61.6
Ciclev10026786m.g Citrus clementina HOM05D005680 ORTHO05D006334 9.1e-14 80.1 92 47.8
Rhsim10G0104100 Rhododendron simsii HOM05D003166 ORTHO05D003605 9.1e-14 80.1 85 51.8
BcaB06g28712 Brassica carinata HOM05D005680 ORTHO05D006334 1.2e-13 79.7 78 55.1
Sabra05G0114900 Salix brachista HOM05D005680 ORTHO05D006334 1.2e-13 79.7 73 56.2
EL10Ac6g15662 Beta vulgaris HOM05D005680 ORTHO05D006334 1.6e-13 79.3 87 50.6
COL.COLO4_17729 Corchorus olitorius HOM05D005680 ORTHO05D006334 2.0e-13 79.0 78 57.7
BcaC01g05829 Brassica carinata HOM05D005680 ORTHO05D006334 2.7e-13 78.6 69 58.0
A04p25910 Brassica napus HOM05D005680 ORTHO05D006334 2.7e-13 78.6 62 62.9
C03p22000 Brassica napus HOM05D005680 ORTHO05D006334 2.7e-13 78.6 69 58.0
BraA04t18094Z Brassica rapa HOM05D005680 ORTHO05D006334 2.7e-13 78.6 62 62.9
Duzib147G0030 Durio zibethinus HOM05D005680 ORTHO05D006334 2.7e-13 78.6 72 55.6
Eucgr.H02278 Eucalyptus grandis HOM05D005680 ORTHO05D006334 2.7e-13 78.6 71 52.1
Gohir.D11G205900 Gossypium hirsutum HOM05D005680 ORTHO05D006334 2.7e-13 78.6 88 50.0
Gorai.007G221000 Gossypium raimondii HOM05D005680 ORTHO05D006334 2.7e-13 78.6 88 50.0
Lj2g0023086 Lotus japonicus HOM05D005680 ORTHO05D006334 2.7e-13 78.6 54 64.8
Ca_13933_v3 Cicer arietinum L. HOM05D005680 ORTHO05D006334 3.5e-13 78.2 87 49.4
Thhalv10017732m.g Eutrema salsugineum HOM05D005680 ORTHO05D006334 3.5e-13 78.2 62 62.9
TAR625G0576 Trochodendron aralioides HOM05D005680 ORTHO05D006334 4.5e-13 77.8 83 53.0
Glyma.05G103100 Glycine max HOM05D005680 ORTHO05D006334 5.9e-13 77.4 79 49.4
Sabra05G0116000 Salix brachista HOM05D005680 ORTHO05D006334 7.7e-13 77.0 73 54.8
CARHR127690 Cardamine hirsuta HOM05D005680 ORTHO05D006334 1.0e-12 76.6 69 58.0
Medtr4g095330 Medicago truncatula HOM05D005680 ORTHO05D006334 1.0e-12 76.6 86 46.5
Sp4g16030 Schrenkiella parvula HOM05D005680 ORTHO05D006334 1.0e-12 76.6 62 61.3
AL4G29360 Arabidopsis lyrata HOM05D005680 ORTHO05D006334 1.3e-12 76.3 69 56.5
arahy.Tifrunner.gnm1.ann1.C6RKPL Arachis hypogaea HOM05D005680 ORTHO05D006334 1.3e-12 76.3 72 54.2
BcaB01g03924 Brassica carinata HOM05D005680 ORTHO05D006334 1.7e-12 75.9 69 55.1
Carub.0004s1530 Capsella rubella HOM05D005680 ORTHO05D006334 1.7e-12 75.9 57 63.2
ClCG01G017300 Citrullus lanatus HOM05D005680 ORTHO05D006334 1.7e-12 75.9 69 55.1
Nn1g04362 Nelumbo nucifera HOM05D005680 ORTHO05D006334 1.7e-12 75.9 69 55.1
Atru.chr3.206 Acer truncatum HOM05D005680 ORTHO05D006334 2.3e-12 75.5 75 52.0
BcaC02g07811 Brassica carinata HOM05D005680 ORTHO05D006334 2.3e-12 75.5 78 52.6
C04p63190 Brassica napus HOM05D005680 ORTHO05D006334 2.3e-12 75.5 78 52.6
Gohir.A11G217600 Gossypium hirsutum HOM05D005680 ORTHO05D006334 2.3e-12 75.5 76 52.6
Potri.005G145200 Populus trichocarpa HOM05D005680 ORTHO05D006334 2.3e-12 75.5 73 54.8
Aqoxy7G01353 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 2.9e-12 75.1 52 65.4
MELO3C007608.2 Cucumis melo HOM05D005680 ORTHO05D006334 2.9e-12 75.1 58 63.8
Ah.03g146390 Amaranthus hybridus HOM05D005680 ORTHO05D006334 3.8e-12 74.7 79 51.9
Duzib052G1168 Durio zibethinus HOM05D005680 ORTHO05D006334 3.8e-12 74.7 90 51.1
Thecc.02G019100 Theobroma cacao HOM05D005680 ORTHO05D006334 3.8e-12 74.7 89 51.7
ATR0030G059 Amborella trichopoda HOM05D005680 ORTHO05D006334 5.0e-12 74.3 50 78.0
Glyma.17G164200 Glycine max HOM05D005680 ORTHO05D006334 5.0e-12 74.3 91 48.4
Lj4g0022522 Lotus japonicus HOM05D005680 ORTHO05D006334 5.0e-12 74.3 58 58.6
Phvul.003G237400 Phaseolus vulgaris HOM05D005680 ORTHO05D006334 5.0e-12 74.3 77 51.9
ATR0605G143 Amborella trichopoda HOM05D005680 ORTHO05D006334 6.6e-12 73.9 52 75.0
CDE04G1110 Ceratophyllum demersum HOM05D005680 ORTHO05D006334 6.6e-12 73.9 85 45.9
SalBow5G4637 Salvia bowleyana HOM05D005680 ORTHO05D006334 6.6e-12 73.9 73 47.9
Eucgr.H02273 Eucalyptus grandis HOM05D005680 ORTHO05D006334 8.6e-12 73.6 71 49.3
PSO063G6705 Papaver somniferum HOM05D005680 ORTHO05D006334 8.6e-12 73.6 58 60.3
THA.LOC104806914 Tarenaya hassleriana HOM05D005680 ORTHO05D006334 2.5e-11 72.0 59 61.0
TPR.G23854 Trifolium pratense HOM05D005680 ORTHO05D006334 2.5e-11 72.0 82 47.6
Lalb_Chr23g0265551 Lupinus albus HOM05D005680 ORTHO05D006334 4.2e-11 71.2 69 53.6
Aa31LG9G13590 Aethionema arabicum HOM05D005680 ORTHO05D006334 5.5e-11 70.9 49 65.3
AT2G33690 Arabidopsis thaliana HOM05D005680 ORTHO05D006334 5.5e-11 70.9 69 50.7
AUR62038279 Chenopodium quinoa HOM05D005680 ORTHO05D006334 5.5e-11 70.9 71 54.9
Lalb_Chr05g0226041 Lupinus albus HOM05D005680 ORTHO05D006334 5.5e-11 70.9 85 47.1
TWI09G1440 Tripterygium wilfordii HOM05D005680 ORTHO05D006334 5.5e-11 70.9 67 55.2
arahy.Tifrunner.gnm1.ann1.Y5V9TA Arachis hypogaea HOM05D005680 ORTHO05D006334 7.2e-11 70.5 72 52.8
CsaV3_6G043830 Cucumis sativus L. HOM05D005680 ORTHO05D006334 7.2e-11 70.5 71 52.1
MD15G1292700 Malus domestica HOM05D005680 ORTHO05D006334 9.5e-11 70.1 73 46.6
CAN.G1075.10 Capsicum annuum HOM05D005680 ORTHO05D006334 1.6e-10 69.3 71 49.3
AUR62003966 Chenopodium quinoa HOM05D005680 ORTHO05D006334 1.6e-10 69.3 78 51.3
Ca_17983_v3 Cicer arietinum L. HOM05D005680 ORTHO05D006334 1.6e-10 69.3 74 50.0
Nitab4.5_0007941g0020 Nicotiana tabacum HOM05D005680 ORTHO05D006334 1.6e-10 69.3 63 52.4
Oeu013277.1 Olea europaea HOM05D005680 ORTHO05D006334 2.1e-10 68.9 81 45.7
PGR102G2721 Punica granatum HOM05D005680 ORTHO05D006334 2.1e-10 68.9 49 65.3
HPP92_012496 Vanilla planifolia HOM05D005680 ORTHO05D006334 2.8e-10 68.6 87 47.1
Prupe.6G224700 Prunus persica HOM05D005680 ORTHO05D006334 3.6e-10 68.2 89 41.6
Sopen02g037260 Solanum pennellii HOM05D005680 ORTHO05D006334 3.6e-10 68.2 68 51.5
CANSAT01G2162 Cannabis sativa HOM05D005680 ORTHO05D006334 8.0e-10 67.0 72 50.0
MD02G1181800 Malus domestica HOM05D005680 ORTHO05D006334 8.0e-10 67.0 86 39.5
Medtr8g081540 Medicago truncatula HOM05D005680 ORTHO05D006334 8.0e-10 67.0 71 49.3
Sc19g0003710 Simmondsia chinensis HOM05D005680 ORTHO05D006334 8.0e-10 67.0 46 63.0
Psat4g083200 Pisum sativum HOM05D005680 ORTHO05D006334 1.0e-09 66.6 88 43.2
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 1.8e-09 65.9 58 55.2
Gorai.012G169600 Gossypium raimondii HOM05D005680 ORTHO05D006334 1.8e-09 65.9 69 49.3
Sc25g0001410 Simmondsia chinensis HOM05D005680 ORTHO05D006334 1.8e-09 65.9 89 42.7
Gohir.D04G176700 Gossypium hirsutum HOM05D005680 ORTHO05D006334 2.3e-09 65.5 69 49.3
HanXRQChr12g0377211 Helianthus annuus HOM05D005680 ORTHO05D006334 2.3e-09 65.5 59 57.6
Nitab4.5_0003878g0080 Nicotiana tabacum HOM05D005680 ORTHO05D006334 2.3e-09 65.5 63 49.2
PGSC0003DMG400024942 Solanum tuberosum HOM05D005680 ORTHO05D006334 2.3e-09 65.5 68 48.5
Cpa.g.sc6.54 Carica papaya HOM05D005680 ORTHO05D006334 3.0e-09 65.1 46 67.4
Gohir.A04G133600 Gossypium hirsutum HOM05D005680 ORTHO05D006334 4.0e-09 64.7 69 50.7
DCAR_003112 Daucus carota HOM05D005680 ORTHO05D006334 6.8e-09 63.9 72 48.6
Lj1g0023451 Lotus japonicus HOM05D005680 ORTHO05D006334 1.2e-08 63.2 71 49.3
Nitab4.5_0000419g0130 Nicotiana tabacum HOM05D005680 ORTHO05D006334 1.2e-08 63.2 63 50.8
Psat7g075160 Pisum sativum HOM05D005680 ORTHO05D006334 1.5e-08 62.8 52 53.8
TPR.G11882 Trifolium pratense HOM05D005680 ORTHO05D006334 2.6e-08 62.0 81 42.0
AT2G23110 Arabidopsis thaliana HOM05D005680 ORTHO05D006334 3.4e-08 61.6 85 42.4
SalBow1G8512 Salvia bowleyana HOM05D005680 ORTHO05D006334 3.4e-08 61.6 75 42.7
Carub.0004s0232 Capsella rubella HOM05D005680 ORTHO05D006334 1.7e-07 59.3 78 39.7
COL.COLO4_11529 Corchorus olitorius HOM05D005680 ORTHO05D006334 1.7e-07 59.3 62 53.2
Sp4g02150 Schrenkiella parvula HOM05D005680 ORTHO05D006334 1.7e-07 59.3 81 39.5
Zm00001eb316370 Zea mays HOM05D031961 ORTHO05D006334 2.2e-07 58.9 73 42.5
CARHR114400 Cardamine hirsuta HOM05D005680 ORTHO05D006334 2.8e-07 58.5 56 50.0
Aa31LG7G13780 Aethionema arabicum HOM05D005680 ORTHO05D006334 4.9e-07 57.8 52 59.6
CARHR114390 Cardamine hirsuta HOM05D013772 ORTHO05D006334 4.9e-07 57.8 64 48.4
ECA246G0256 Erigeron canadensis HOM05D005680 ORTHO05D006334 4.9e-07 57.8 59 54.2
RcHm_v2.0_Chr2g0107321 Rosa chinensis HOM05D005680 ORTHO05D006334 1.4e-06 56.2 64 46.9
THA.LOC104819870 Tarenaya hassleriana HOM05D005680 ORTHO05D006334 1.4e-06 56.2 42 54.8
Thhalv10000392m.g Eutrema salsugineum HOM05D005680 ORTHO05D006334 1.8e-06 55.8 81 37.0
AT2G23120 Arabidopsis thaliana HOM05D013772 ORTHO05D006334 2.4e-06 55.5 54 55.6
AL4G12960 Arabidopsis lyrata HOM05D013772 ORTHO05D006334 3.1e-06 55.1 59 50.8
FAN02G2432 Fragaria x ananassa HOM05D005680 ORTHO05D006334 7.0e-06 53.9 45 51.1
FAN26G2100 Fragaria x ananassa HOM05D005680 ORTHO05D006334 7.0e-06 53.9 45 51.1
Carub.0004s0233 Capsella rubella HOM05D013772 ORTHO05D006334 9.2e-06 53.5 71 45.1


User provided reference genes

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