Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 9.5e-101 370.2 185 100.0
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.7e-86 322.8 185 85.4
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.1e-83 313.5 180 85.6
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 1.9e-77 292.7 178 82.0
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 5.6e-77 291.2 177 81.4
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 7.3e-77 290.8 175 82.3
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.2e-74 283.5 176 79.0
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 2.6e-74 282.3 187 76.5
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 5.8e-74 281.2 186 75.3
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 7.6e-74 280.8 182 75.3
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 1.3e-73 280.0 183 76.0
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 3.8e-73 278.5 189 75.7
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 4.9e-73 278.1 177 76.8
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 4.9e-73 278.1 183 76.5
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 4.9e-73 278.1 182 74.7
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 2.4e-72 275.8 183 74.3
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 4.2e-72 275.0 177 77.4
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 4.2e-72 275.0 180 77.2
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 9.3e-72 273.9 180 76.1
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.6e-71 273.1 177 74.0
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 2.1e-71 272.7 184 71.7
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 2.1e-71 272.7 175 77.1
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 3.9e-70 268.5 185 71.9
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 6.7e-70 267.7 184 71.7
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 8.7e-70 267.3 180 74.4
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.1e-69 266.9 180 73.9
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 1.1e-69 266.9 181 74.0
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 5.6e-69 264.6 176 75.0
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 7.4e-69 264.2 184 70.1
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.3e-68 263.5 184 70.7
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 1.6e-68 263.1 179 72.1
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.1e-68 262.7 187 71.1
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.6e-68 261.9 184 70.1
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 3.6e-68 261.9 181 72.4
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 4.8e-68 261.5 181 75.1
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 4.8e-68 261.5 187 70.6
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 4.8e-68 261.5 179 71.5
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 8.1e-68 260.8 175 73.7
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 1.4e-67 260.0 182 68.7
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 1.4e-67 260.0 178 74.7
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.8e-67 259.6 181 72.4
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 3.1e-67 258.8 180 75.0
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 3.1e-67 258.8 181 71.8
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 4.0e-67 258.5 178 71.3
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 6.9e-67 257.7 181 71.8
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 1.2e-66 256.9 183 72.7
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 1.5e-66 256.5 179 69.8
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 1.5e-66 256.5 179 69.8
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 2.6e-66 255.8 183 71.6
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 4.5e-66 255.0 179 74.3
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 5.8e-66 254.6 182 72.0
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 7.6e-66 254.2 160 74.4
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 1.7e-65 253.1 178 69.1
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 3.8e-65 251.9 189 70.9
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 3.8e-65 251.9 182 70.9
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 1.1e-64 250.4 169 69.8
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.9e-64 249.6 164 75.0
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 3.2e-64 248.8 186 69.4
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 9.3e-64 247.3 171 67.8
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 9.3e-64 247.3 171 68.4
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 2.1e-63 246.1 173 69.4
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 2.3e-62 242.7 161 73.9
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 2.3e-62 242.7 160 74.4
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 1.5e-61 240.0 242 55.0
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 4.3e-61 238.4 186 68.3
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 5.6e-61 238.0 186 68.3
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 4.8e-60 235.0 187 66.3
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 3.1e-59 232.3 186 62.9
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.0e-58 229.6 143 76.9
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 4.5e-58 228.4 165 67.3
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.2e-57 226.1 170 64.1
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 6.5e-57 224.6 169 65.1
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 8.4e-57 224.2 167 64.1
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 1.1e-56 223.8 165 66.1
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.9e-56 223.0 135 80.7
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.9e-56 223.0 176 64.8
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 2.5e-56 222.6 161 67.7
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 3.2e-56 222.2 158 67.7
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 3.2e-56 222.2 173 63.6
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 5.5e-56 221.5 171 62.6
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 7.1e-56 221.1 173 63.0
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 7.1e-56 221.1 162 66.7
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.2e-55 220.3 158 65.8
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 1.6e-55 219.9 162 66.0
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 2.1e-55 219.5 162 66.0
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 2.7e-55 219.2 177 63.8
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 8.7e-54 214.2 139 74.8
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 1.5e-53 213.4 153 72.5
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 5.7e-53 211.5 171 61.4
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 1.4e-51 206.8 133 76.7
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 6.9e-51 204.5 139 71.2
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 1.7e-49 199.9 135 73.3
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 7.4e-45 184.5 196 53.6
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 2.9e-41 172.6 172 58.1
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 6.5e-41 171.4 198 46.5
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.1e-40 170.6 126 66.7
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.6e-39 165.6 177 53.7
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 4.6e-39 165.2 198 47.0
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.3e-38 162.9 146 54.1
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 8.5e-33 144.4 102 75.5
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 9.7e-29 131.0 83 69.9
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 3.1e-27 125.9 168 44.0
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 5.3e-27 125.2 86 69.8
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 9.1e-27 124.4 125 55.2
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.7e-25 120.2 172 45.3
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 4.7e-23 112.1 73 74.0
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 3.0e-22 109.4 80 65.0
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 2.2e-20 103.2 164 37.2
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 1.6e-18 97.1 138 41.3
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 2.1e-15 86.7 69 58.0
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 7.2e-08 61.6 67 46.3
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 2.1e-07 60.1 40 67.5
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 1.0e-06 57.8 36 72.2


User provided reference genes

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