Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p013848 Quercus lobata HOM05D006241 ORTHO05D007842 5.1e-39 163.7 70 100.0
THA.LOC109116669 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 1.4e-33 145.6 68 85.3
Prupe.1G355800 Prunus persica HOM05D006241 ORTHO05D007842 1.9e-33 145.2 66 87.9
THA.LOC104811457 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 4.2e-33 144.1 68 82.4
Cc10_g00830 Coffea canephora HOM05D006241 ORTHO05D007842 9.3e-33 142.9 68 86.8
CiPaw.08G071900 Carya illinoinensis HOM05D006241 ORTHO05D007842 3.6e-32 141.0 70 81.4
Aa31LG4G6300 Aethionema arabicum HOM05D006241 ORTHO05D007842 4.6e-32 140.6 68 82.4
CiPaw.07G140100 Carya illinoinensis HOM05D006241 ORTHO05D007842 7.9e-32 139.8 69 81.2
FvH4_2g37630 Fragaria vesca HOM05D006241 ORTHO05D007842 1.4e-31 139.0 70 78.6
PGR031G1817 Punica granatum HOM05D006241 ORTHO05D007842 1.8e-31 138.7 67 83.6
arahy.Tifrunner.gnm1.ann1.1F1YZI Arachis hypogaea HOM05D006241 ORTHO05D007842 3.0e-31 137.9 68 79.4
arahy.Tifrunner.gnm1.ann1.1NSU2H Arachis hypogaea HOM05D006241 ORTHO05D007842 3.0e-31 137.9 68 79.4
arahy.Tifrunner.gnm1.ann1.4R2MNP Arachis hypogaea HOM05D006241 ORTHO05D007842 3.0e-31 137.9 68 79.4
arahy.Tifrunner.gnm1.ann1.L8CN1K Arachis hypogaea HOM05D006241 ORTHO05D007842 3.0e-31 137.9 68 79.4
CARHR069760 Cardamine hirsuta HOM05D006241 ORTHO05D007842 3.0e-31 137.9 68 77.9
COL.COLO4_21601 Corchorus olitorius HOM05D006241 ORTHO05D007842 3.0e-31 137.9 66 80.3
Lj3g0010530 Lotus japonicus HOM05D006241 ORTHO05D007842 3.0e-31 137.9 65 83.1
AL2G36270 Arabidopsis lyrata HOM05D006241 ORTHO05D007842 5.1e-31 137.1 66 80.3
AT1G76200 Arabidopsis thaliana HOM05D006241 ORTHO05D007842 5.1e-31 137.1 66 80.3
Cpa.g.sc222.6 Carica papaya HOM05D006241 ORTHO05D007842 6.7e-31 136.7 68 80.9
CSS0008517 Camellia sinensis var. sinensis HOM05D006241 ORTHO05D007842 8.8e-31 136.3 73 76.7
CsaV3_4G037120 Cucumis sativus L. HOM05D006241 ORTHO05D007842 8.8e-31 136.3 66 80.3
Duzib116G0823 Durio zibethinus HOM05D006241 ORTHO05D007842 1.1e-30 136.0 70 77.1
Manes.05G136000 Manihot esculenta HOM05D006241 ORTHO05D007842 1.1e-30 136.0 65 81.5
Manes.18G006720 Manihot esculenta HOM05D006241 ORTHO05D007842 1.1e-30 136.0 65 83.1
Gohir.A01G107600 Gossypium hirsutum HOM05D006241 ORTHO05D007842 1.9e-30 135.2 70 77.1
Atru.chr13.161 Acer truncatum HOM05D006241 ORTHO05D007842 2.5e-30 134.8 69 78.3
MELO3C017010.2 Cucumis melo HOM05D006241 ORTHO05D007842 3.3e-30 134.4 68 79.4
Gorai.009G189100 Gossypium raimondii HOM05D006241 ORTHO05D007842 3.3e-30 134.4 70 77.1
Nn5g30908 Nelumbo nucifera HOM05D006241 ORTHO05D007842 3.3e-30 134.4 67 82.1
Potri.005G248600 Populus trichocarpa HOM05D006241 ORTHO05D007842 3.3e-30 134.4 68 77.9
Sabra05G0192000 Salix brachista HOM05D006241 ORTHO05D007842 3.3e-30 134.4 68 77.9
FAN15G0812 Fragaria x ananassa HOM05D006241 ORTHO05D007842 4.3e-30 134.0 70 75.7
Duzib093G0667 Durio zibethinus HOM05D006241 ORTHO05D007842 5.7e-30 133.7 70 75.7
Thecc.08G056300 Theobroma cacao HOM05D006241 ORTHO05D007842 5.7e-30 133.7 70 74.3
Psat7g177480 Pisum sativum HOM05D006241 ORTHO05D007842 7.4e-30 133.3 66 80.3
Gohir.D01G094000 Gossypium hirsutum HOM05D006241 ORTHO05D007842 9.7e-30 132.9 70 75.7
Gorai.002G119300 Gossypium raimondii HOM05D006241 ORTHO05D007842 9.7e-30 132.9 70 75.7
Gohir.D05G183800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 1.3e-29 132.5 70 75.7
Potri.002G012700 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.3e-29 132.5 68 76.5
Ca_19011_v3 Cicer arietinum L. HOM05D006241 ORTHO05D007842 1.7e-29 132.1 62 80.6
Actinidia17033 Actinidia chinensis HOM05D006241 ORTHO05D007842 2.2e-29 131.7 68 80.9
Gohir.A05G180800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 2.8e-29 131.3 70 74.3
Thhalv10019410m.g Eutrema salsugineum HOM05D006241 ORTHO05D007842 3.7e-29 131.0 68 77.9
Migut.N03197 Erythranthe guttata HOM05D006241 ORTHO05D007842 4.8e-29 130.6 63 82.5
Glyma.11G099500 Glycine max HOM05D006241 ORTHO05D007842 4.8e-29 130.6 68 79.4
Carub.0002s2310 Capsella rubella HOM05D006241 ORTHO05D007842 6.3e-29 130.2 63 79.4
Duzib041G0756 Durio zibethinus HOM05D006241 ORTHO05D007842 6.3e-29 130.2 70 74.3
Sp5g31350 Schrenkiella parvula HOM05D006241 ORTHO05D007842 6.3e-29 130.2 63 79.4
Cfa014051 Carpinus fangiana HOM05D006241 ORTHO05D007842 8.2e-29 129.8 64 79.7
TAR376G1175 Trochodendron aralioides HOM05D006241 ORTHO05D007842 8.2e-29 129.8 61 85.2
Actinidia15484 Actinidia chinensis HOM05D006241 ORTHO05D007842 1.1e-28 129.4 68 80.9
Dinv39579 Davidia involucrata HOM05D006241 ORTHO05D007842 1.1e-28 129.4 66 81.8
CANSAT54G0965 Cannabis sativa HOM05D006241 ORTHO05D007842 1.4e-28 129.0 68 80.9
Glyma.12G025500 Glycine max HOM05D006241 ORTHO05D007842 1.4e-28 129.0 68 77.9
SGA_v2.0_scaffold25G11191 Striga asiatica HOM05D006241 ORTHO05D007842 1.4e-28 129.0 62 79.0
TWI12G0416 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 1.4e-28 129.0 65 84.6
TAR381G1678 Trochodendron aralioides HOM05D006241 ORTHO05D007842 1.4e-28 129.0 62 82.3
PGSC0003DMG400009898 Solanum tuberosum HOM05D006241 ORTHO05D007842 2.4e-28 128.3 68 79.4
TWI56G0163 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 2.4e-28 128.3 65 83.1
CAN.G311.105 Capsicum annuum HOM05D006241 ORTHO05D007842 3.1e-28 127.9 68 76.5
CDE05G1511 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 3.1e-28 127.9 69 73.9
Phvul.011G027800 Phaseolus vulgaris HOM05D006241 ORTHO05D007842 3.1e-28 127.9 66 78.8
Eucgr.F01733 Eucalyptus grandis HOM05D006241 ORTHO05D007842 4.1e-28 127.5 61 80.3
BcaB02g07055 Brassica carinata HOM05D006241 ORTHO05D007842 6.9e-28 126.7 66 74.2
BcaC08g47115 Brassica carinata HOM05D006241 ORTHO05D007842 6.9e-28 126.7 63 76.2
A07p28590 Brassica napus HOM05D006241 ORTHO05D007842 6.9e-28 126.7 66 74.2
BcaC08g47119 Brassica carinata HOM05D006241 ORTHO05D007842 1.2e-27 125.9 65 73.8
BcaC08g47281 Brassica carinata HOM05D006241 ORTHO05D007842 1.2e-27 125.9 65 73.8
A07p41770 Brassica napus HOM05D006241 ORTHO05D007842 1.2e-27 125.9 65 73.8
C06p50150 Brassica napus HOM05D006241 ORTHO05D007842 1.2e-27 125.9 65 73.8
BolC6t40055H Brassica oleracea HOM05D006241 ORTHO05D007842 1.2e-27 125.9 65 73.8
PSO357G0248 Papaver somniferum HOM05D006241 ORTHO05D007842 1.2e-27 125.9 61 80.3
Lalb_Chr17g0337811 Lupinus albus HOM05D006241 ORTHO05D007842 1.5e-27 125.6 64 79.7
BraA07t31707Z Brassica rapa HOM05D006241 ORTHO05D007842 2.0e-27 125.2 65 73.8
Dinv31923 Davidia involucrata HOM05D006241 ORTHO05D007842 2.0e-27 125.2 61 82.0
Lsat_1_v5_gn_8_133721 Lactuca sativa HOM05D006241 ORTHO05D007842 2.0e-27 125.2 66 80.3
PSO170G5266 Papaver somniferum HOM05D006241 ORTHO05D007842 2.0e-27 125.2 61 80.3
Lalb_Chr10g0094931 Lupinus albus HOM05D006241 ORTHO05D007842 2.6e-27 124.8 69 73.9
CDE05G0950 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 3.4e-27 124.4 68 72.1
Aqoxy6G01804 Aquilegia oxysepala HOM05D006241 ORTHO05D007842 7.7e-27 123.2 56 85.7
Ciclev10010113m.g Citrus clementina HOM05D006241 ORTHO05D007842 3.8e-26 120.9 66 69.7
BraA07t30500Z Brassica rapa HOM05D006241 ORTHO05D007842 1.4e-25 119.0 66 72.7
ECA248G1104 Erigeron canadensis HOM05D006241 ORTHO05D007842 1.4e-25 119.0 71 74.6
BcaB05g24973 Brassica carinata HOM05D006241 ORTHO05D007842 5.5e-25 117.1 59 74.6
BcaC08g45539 Brassica carinata HOM05D006241 ORTHO05D007842 5.5e-25 117.1 66 71.2
C06p32170 Brassica napus HOM05D006241 ORTHO05D007842 5.5e-25 117.1 66 71.2
BolC6t38340H Brassica oleracea HOM05D006241 ORTHO05D007842 5.5e-25 117.1 66 71.2
ATR0661G361 Amborella trichopoda HOM05D006241 ORTHO05D007842 3.6e-24 114.4 68 72.1
BraA02t07081Z Brassica rapa HOM05D006241 ORTHO05D007842 6.1e-24 113.6 57 75.4
GSVIVG01008691001 Vitis vinifera HOM05D006241 ORTHO05D007842 1.4e-23 112.5 53 77.4
Os05g0122900 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 3.9e-23 110.9 61 70.5
MD08G1003800 Malus domestica HOM05D006241 ORTHO05D007842 9.7e-22 106.3 51 84.3
Nitab4.5_0000588g0230 Nicotiana tabacum HOM05D006241 ORTHO05D007842 1.3e-21 105.9 51 82.4
RcHm_v2.0_Chr6g0304101 Rosa chinensis HOM05D006241 ORTHO05D007842 2.8e-21 104.8 50 82.0
VMungo1127G1075 Vigna mungo HOM05D006241 ORTHO05D007842 2.8e-21 104.8 52 80.8
FAN20G1861 Fragaria x ananassa HOM05D006241 ORTHO05D007842 4.8e-21 104.0 50 82.0
MD15G1003400 Malus domestica HOM05D006241 ORTHO05D007842 4.8e-21 104.0 50 84.0
AagrBONN_evm.TU.Sc2ySwM_117.850 Anthoceros agrestis HOM05D006241 ORTHO05D007842 6.3e-21 103.6 79 58.2
Zm00001eb356460 Zea mays HOM05D006241 ORTHO05D007842 1.1e-20 102.8 63 63.5
Zm00001eb294120 Zea mays HOM05D006241 ORTHO05D007842 1.8e-20 102.1 61 65.6
Pp3c21_21340 Physcomitrium patens HOM05D006241 ORTHO05D007842 3.1e-20 101.3 68 64.7
Pp3c18_1920 Physcomitrium patens HOM05D006241 ORTHO05D007842 9.1e-20 99.8 69 62.3
HanXRQChr17g0554651 Helianthus annuus HOM05D006241 ORTHO05D007842 2.6e-19 98.2 51 82.4
HanXRQChr17g0555751 Helianthus annuus HOM05D006241 ORTHO05D007842 3.4e-19 97.8 51 80.4
Os06g0725400 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 1.3e-18 95.9 61 63.9
MBI19_g43741_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 6.5e-18 93.6 48 75.0
Mapoly0103s0030 Marchantia polymorpha HOM05D006241 ORTHO05D007842 8.5e-18 93.2 60 60.0
Mapoly0108s0047 Marchantia polymorpha HOM05D006241 ORTHO05D007842 8.5e-18 93.2 60 58.3
Hund08526 Selenicereus undatus HOM05D006241 ORTHO05D007842 5.5e-17 90.5 53 73.6
HPP92_021050 Vanilla planifolia HOM05D006241 ORTHO05D007842 8.0e-16 86.7 53 66.0
BolC2t09367H Brassica oleracea HOM05D006241 ORTHO05D007842 3.9e-15 84.3 45 71.1
SalBow6G4847 Salvia bowleyana HOM05D006241 ORTHO05D007842 2.2e-13 78.6 47 70.2
Sabra07G0051400 Salix brachista HOM05D006241 ORTHO05D349851 4.8e-13 77.4 51 64.7
Sed0002381 Sechium edule HOM05D006241 ORTHO05D007842 1.6e-11 72.4 57 56.1
ClCG05G015200 Citrullus lanatus HOM05D006241 ORTHO05D007842 2.0e-11 72.0 32 84.4
DCAR_013903 Daucus carota HOM05D006241 ORTHO05D007842 2.0e-11 72.0 50 64.0
Ah.01g001690 Amaranthus hybridus HOM05D006241 ORTHO05D007842 5.9e-11 70.5 36 80.6
AUR62015196 Chenopodium quinoa HOM05D006241 ORTHO05D007842 1.0e-10 69.7 36 77.8
AUR62017658 Chenopodium quinoa HOM05D006241 ORTHO05D007842 1.0e-10 69.7 36 77.8
Ah.01g013010 Amaranthus hybridus HOM05D006241 ORTHO05D007842 1.7e-10 68.9 36 77.8
Medtr4g075160 Medicago truncatula HOM05D006241 ORTHO05D007842 2.9e-10 68.2 38 71.1
Nn6g31777 Nelumbo nucifera HOM05D006241 ORTHO05D007842 2.9e-10 68.2 41 70.7
vmacro04395 Vaccinium macrocarpon HOM05D006241 ORTHO05D007842 1.5e-09 65.9 36 75.0
MBI19_g35281_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 1.9e-09 65.5 33 72.7
DCAR_016755 Daucus carota HOM05D006241 ORTHO05D007842 2.5e-09 65.1 32 78.1
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 4.2e-09 64.3 32 75.0


User provided reference genes

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