Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p013773 Quercus lobata HOM05D003234 ORTHO05D003635 5.4e-58 227.6 130 100.0
Gohir.A05G180900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 3.3e-39 165.2 130 77.7
Gohir.D05G183900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 3.3e-39 165.2 130 77.7
Gorai.009G189400 Gossypium raimondii HOM05D003234 ORTHO05D003635 3.3e-39 165.2 130 77.7
Duzib093G1967 Durio zibethinus HOM05D003234 ORTHO05D003635 4.3e-39 164.9 130 76.9
Thecc.08G055600 Theobroma cacao HOM05D003234 ORTHO05D003635 4.3e-39 164.9 130 76.2
CiPaw.07G140700 Carya illinoinensis HOM05D003234 ORTHO05D003635 9.5e-39 163.7 130 76.2
Duzib116G0672 Durio zibethinus HOM05D003234 ORTHO05D003635 3.6e-38 161.8 130 76.2
CiPaw.08G071600 Carya illinoinensis HOM05D003234 ORTHO05D003635 4.7e-38 161.4 130 75.4
TWI12G0861 Tripterygium wilfordii HOM05D003234 ORTHO05D003635 4.7e-38 161.4 130 76.2
Cpa.g.sc26.223 Carica papaya HOM05D003234 ORTHO05D003635 6.2e-38 161.0 130 74.6
MELO3C026549.2 Cucumis melo HOM05D003234 ORTHO05D003635 8.0e-38 160.6 130 75.4
CsaV3_6G031700 Cucumis sativus L. HOM05D003234 ORTHO05D003635 8.0e-38 160.6 130 75.4
Sed0016414 Sechium edule HOM05D003234 ORTHO05D003635 1.4e-37 159.8 130 74.6
ClCG08G009600 Citrullus lanatus HOM05D003234 ORTHO05D003635 1.8e-37 159.5 130 74.6
Duzib041G0372 Durio zibethinus HOM05D003234 ORTHO05D003635 1.8e-37 159.5 130 74.6
Gohir.D02G099100 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.3e-37 159.1 130 73.8
Dinv31919 Davidia involucrata HOM05D003234 ORTHO05D003635 3.1e-37 158.7 130 73.1
Potri.002G013000 Populus trichocarpa HOM05D003234 ORTHO05D003635 4.0e-37 158.3 130 73.8
ClCG00G002880 Citrullus lanatus HOM05D003234 ORTHO05D003635 5.2e-37 157.9 130 73.8
Hma1.2p1_1260F.1_g271060 Hydrangea macrophylla HOM05D003234 ORTHO05D003635 5.2e-37 157.9 130 73.8
CANSAT25G0014 Cannabis sativa HOM05D003234 ORTHO05D003635 8.9e-37 157.1 130 73.1
THA.LOC104813762 Tarenaya hassleriana HOM05D003234 ORTHO05D003635 8.9e-37 157.1 130 73.8
CARHR020910 Cardamine hirsuta HOM05D003234 ORTHO05D003635 1.2e-36 156.8 130 73.1
Manes.18G007200 Manihot esculenta HOM05D003234 ORTHO05D003635 1.5e-36 156.4 130 72.3
Nitab4.5_0002710g0120 Nicotiana tabacum HOM05D003234 ORTHO05D003635 1.5e-36 156.4 131 74.8
Gohir.A02G083600 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.0e-36 156.0 130 73.1
Potri.005G248300 Populus trichocarpa HOM05D003234 ORTHO05D003635 2.6e-36 155.6 130 72.3
Sed0012631 Sechium edule HOM05D003234 ORTHO05D003635 2.6e-36 155.6 130 73.1
GSVIVG01008697001 Vitis vinifera HOM05D003234 ORTHO05D003635 2.6e-36 155.6 130 73.8
Actinidia37965 Actinidia chinensis HOM05D003234 ORTHO05D003635 3.4e-36 155.2 130 73.8
AT1G20460 Arabidopsis thaliana HOM05D003234 ORTHO05D003635 4.4e-36 154.8 130 72.3
Gorai.005G112900 Gossypium raimondii HOM05D003234 ORTHO05D003635 4.4e-36 154.8 130 73.1
Lj1g0024220 Lotus japonicus HOM05D003234 ORTHO05D003635 4.4e-36 154.8 130 73.1
Manes.05G140300 Manihot esculenta HOM05D003234 ORTHO05D003635 4.4e-36 154.8 130 73.1
Solyc12g094510.2 Solanum lycopersicum HOM05D003234 ORTHO05D003635 4.4e-36 154.8 130 73.1
Sopen12g031400 Solanum pennellii HOM05D003234 ORTHO05D003635 4.4e-36 154.8 130 73.1
BcaC08g47113 Brassica carinata HOM05D003234 ORTHO05D003635 5.8e-36 154.5 130 71.5
Carub.0001s1993 Capsella rubella HOM05D003234 ORTHO05D003635 5.8e-36 154.5 130 72.3
Nitab4.5_0000337g0170 Nicotiana tabacum HOM05D003234 ORTHO05D003635 5.8e-36 154.5 131 74.0
Thhalv10009165m.g Eutrema salsugineum HOM05D003234 ORTHO05D003635 7.5e-36 154.1 130 72.3
Thhalv10019348m.g Eutrema salsugineum HOM05D003234 ORTHO05D003635 7.5e-36 154.1 130 71.5
Sp1g18170 Schrenkiella parvula HOM05D003234 ORTHO05D003635 7.5e-36 154.1 130 72.3
Aa31LG7G4760 Aethionema arabicum HOM05D003234 ORTHO05D003635 9.8e-36 153.7 130 71.5
PGSC0003DMG400029411 Solanum tuberosum HOM05D003234 ORTHO05D003635 9.8e-36 153.7 130 72.3
Ciclev10002915m.g Citrus clementina HOM05D003234 ORTHO05D003635 1.3e-35 153.3 130 74.6
Cc10_g00860 Coffea canephora HOM05D003234 ORTHO05D003635 1.3e-35 153.3 130 71.5
Peaxi162Scf00400g00314 Petunia axillaris HOM05D003234 ORTHO05D003635 1.3e-35 153.3 131 71.8
Prupe.1G356200 Prunus persica HOM05D003234 ORTHO05D003635 1.3e-35 153.3 130 73.1
MD08G1004300 Malus domestica HOM05D003234 ORTHO05D003635 1.7e-35 152.9 130 73.1
Sp5g31330 Schrenkiella parvula HOM05D003234 ORTHO05D003635 1.7e-35 152.9 130 70.8
Medtr3g115080 Medicago truncatula HOM05D003234 ORTHO05D003635 2.2e-35 152.5 131 71.8
VMungo1309G2978 Vigna mungo HOM05D003234 ORTHO05D003635 2.2e-35 152.5 130 70.8
arahy.Tifrunner.gnm1.ann1.G2HAI2 Arachis hypogaea HOM05D003234 ORTHO05D003635 2.9e-35 152.1 130 71.5
BNapus_Darmor_BZH_scaffold_170p00030 Brassica napus HOM05D003234 ORTHO05D003635 2.9e-35 152.1 130 71.5
Gohir.A05G254800 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.9e-35 152.1 130 71.5
Nitab4.5_0007869g0020 Nicotiana tabacum HOM05D003234 ORTHO05D003635 2.9e-35 152.1 130 71.5
Phvul.009G021200 Phaseolus vulgaris HOM05D003234 ORTHO05D003635 2.9e-35 152.1 130 71.5
BcaB07g32048 Brassica carinata HOM05D003234 ORTHO05D003635 3.7e-35 151.8 130 71.5
BcaC05g25956 Brassica carinata HOM05D003234 ORTHO05D003635 3.7e-35 151.8 130 71.5
A06p16500 Brassica napus HOM05D003234 ORTHO05D003635 3.7e-35 151.8 130 71.5
C05p19050 Brassica napus HOM05D003234 ORTHO05D003635 3.7e-35 151.8 130 71.5
BraA06t24756Z Brassica rapa HOM05D003234 ORTHO05D003635 3.7e-35 151.8 130 71.5
Gorai.009G267900 Gossypium raimondii HOM05D003234 ORTHO05D003635 3.7e-35 151.8 130 71.5
MD15G1003700 Malus domestica HOM05D003234 ORTHO05D003635 3.7e-35 151.8 130 73.1
Nitab4.5_0000699g0170 Nicotiana tabacum HOM05D003234 ORTHO05D003635 3.7e-35 151.8 130 70.8
TPR.G38123 Trifolium pratense HOM05D003234 ORTHO05D003635 3.7e-35 151.8 130 70.8
Gohir.D05G256400 Gossypium hirsutum HOM05D003234 ORTHO05D003635 4.9e-35 151.4 130 71.5
arahy.Tifrunner.gnm1.ann1.VFC9DI Arachis hypogaea HOM05D003234 ORTHO05D003635 6.4e-35 151.0 130 70.8
CAN.G208.7 Capsicum annuum HOM05D003234 ORTHO05D003635 6.4e-35 151.0 130 70.8
FAN15G0717 Fragaria x ananassa HOM05D003234 ORTHO05D003635 8.3e-35 150.6 130 72.3
FAN20G3055 Fragaria x ananassa HOM05D003234 ORTHO05D003635 8.3e-35 150.6 130 72.3
Glyma.06G019600 Glycine max HOM05D003234 ORTHO05D003635 8.3e-35 150.6 130 70.8
PGR031G2527 Punica granatum HOM05D003234 ORTHO05D003635 8.3e-35 150.6 131 71.8
RcHm_v2.0_Chr6g0304061 Rosa chinensis HOM05D003234 ORTHO05D003635 8.3e-35 150.6 130 72.3
FAN27G0038 Fragaria x ananassa HOM05D003234 ORTHO05D003635 1.1e-34 150.2 130 71.5
Glyma.04G019300 Glycine max HOM05D003234 ORTHO05D003635 1.1e-34 150.2 130 70.8
AT1G76185 Arabidopsis thaliana HOM05D003234 ORTHO05D003635 1.9e-34 149.4 130 70.0
Carub.0002s2308 Capsella rubella HOM05D003234 ORTHO05D003635 2.4e-34 149.1 130 69.2
FvH4_2g37670 Fragaria vesca HOM05D003234 ORTHO05D003635 2.4e-34 149.1 130 71.5
Nn6g31830 Nelumbo nucifera HOM05D003234 ORTHO05D003635 2.4e-34 149.1 130 68.5
Migut.N03196 Erythranthe guttata HOM05D003234 ORTHO05D003635 9.2e-34 147.1 130 69.2
MSTRG.22360 Avicennia marina HOM05D003234 ORTHO05D003635 1.6e-33 146.4 130 70.0
BcaB02g07054 Brassica carinata HOM05D003234 ORTHO05D003635 1.6e-33 146.4 130 68.5
Eucgr.F03542 Eucalyptus grandis HOM05D003234 ORTHO05D003635 1.6e-33 146.4 130 68.5
SGA_v2.0_scaffold19G08601 Striga asiatica HOM05D003234 ORTHO05D003635 1.6e-33 146.4 130 70.0
Psat0s3811g0040 Pisum sativum HOM05D003234 ORTHO05D003635 2.1e-33 146.0 130 69.2
Oeu011320.1 Olea europaea HOM05D003234 ORTHO05D003635 4.6e-33 144.8 130 70.0
A02p20490 Brassica napus HOM05D003234 ORTHO05D003635 6.0e-33 144.4 130 66.9
Rhsim06G0008900 Rhododendron simsii HOM05D003234 ORTHO05D003635 1.3e-32 143.3 130 68.5
Hund05127 Selenicereus undatus HOM05D003234 ORTHO05D003635 1.7e-32 142.9 130 67.7
vmacro21831 Vaccinium macrocarpon HOM05D003234 ORTHO05D003635 1.7e-32 142.9 153 62.1
THA.LOC104809745 Tarenaya hassleriana HOM05D003234 ORTHO05D003635 2.3e-32 142.5 130 67.7
Actinidia15481 Actinidia chinensis HOM05D003234 ORTHO05D003635 3.0e-32 142.1 130 67.7
EL10Ac1g02011 Beta vulgaris HOM05D003234 ORTHO05D003635 3.9e-32 141.7 130 65.4
C02p33350 Brassica napus HOM05D003234 ORTHO05D003635 5.1e-32 141.4 130 65.4
vmacro04393 Vaccinium macrocarpon HOM05D003234 ORTHO05D003635 5.1e-32 141.4 130 69.2
Sabra05G0191800 Salix brachista HOM05D003234 ORTHO05D003635 1.1e-31 140.2 199 52.3
BraA02t07080Z Brassica rapa HOM05D003234 ORTHO05D003635 1.5e-31 139.8 130 64.6
SalBow6G3231 Salvia bowleyana HOM05D003234 ORTHO05D003635 3.3e-31 138.7 130 68.5
Sc02g0009000 Simmondsia chinensis HOM05D003234 ORTHO05D003635 3.3e-31 138.7 130 64.6
BcaC03g15650 Brassica carinata HOM05D003234 ORTHO05D003635 5.6e-31 137.9 130 63.8
Nitab4.5_0000588g0270 Nicotiana tabacum HOM05D003234 ORTHO05D003635 7.3e-31 137.5 130 66.2
unitig_21.g20148 Utricularia gibba HOM05D003234 ORTHO05D003635 7.3e-31 137.5 130 66.2
MSTRG.1123 Avicennia marina HOM05D003234 ORTHO05D003635 1.6e-30 136.3 130 63.1
Migut.C00924 Erythranthe guttata HOM05D003234 ORTHO05D003635 1.6e-30 136.3 130 65.4
Lalb_Chr19g0131711 Lupinus albus HOM05D003234 ORTHO05D003635 1.6e-30 136.3 130 69.2
C06p32180 Brassica napus HOM05D003234 ORTHO05D003635 2.1e-30 136.0 130 65.4
HanXRQChr12g0366591 Helianthus annuus HOM05D003234 ORTHO05D003635 2.1e-30 136.0 129 64.3
SHI08007 Sapria himalayana HOM05D003234 ORTHO05D003635 2.8e-30 135.6 130 64.6
BraA07t30501Z Brassica rapa HOM05D003234 ORTHO05D003635 6.2e-30 134.4 130 64.6
Lsat_1_v5_gn_8_27741 Lactuca sativa HOM05D003234 ORTHO05D003635 6.2e-30 134.4 129 64.3
Lalb_Chr11g0061721 Lupinus albus HOM05D003234 ORTHO05D003635 6.2e-30 134.4 130 63.8
A07p28600 Brassica napus HOM05D003234 ORTHO05D003635 8.1e-30 134.0 130 64.6
Aqoxy5G01058 Aquilegia oxysepala HOM05D003234 ORTHO05D003635 1.8e-29 132.9 130 67.7
MSTRG.25294 Avicennia marina HOM05D003234 ORTHO05D003635 4.0e-29 131.7 130 63.1
unitig_744.g24608 Utricularia gibba HOM05D003234 ORTHO05D003635 6.8e-29 131.0 130 63.1
PGSC0003DMG401009896 Solanum tuberosum HOM05D003234 ORTHO05D003635 1.2e-28 130.2 130 64.6
Lalb_Chr08g0246351 Lupinus albus HOM05D003234 ORTHO05D003635 2.0e-28 129.4 130 61.5
Peaxi162Scf01481g00038 Petunia axillaris HOM05D003234 ORTHO05D003635 3.4e-28 128.6 130 63.1
Solyc04g082210.3 Solanum lycopersicum HOM05D003234 ORTHO05D003635 3.4e-28 128.6 130 63.8
Lsat_1_v5_gn_5_39760 Lactuca sativa HOM05D003234 ORTHO05D003635 7.5e-28 127.5 129 62.0
Sopen04g035840 Solanum pennellii HOM05D003234 ORTHO05D003635 9.9e-28 127.1 130 63.1
MBI05_g27809_MAGBIO Magnolia biondii HOM05D003234 ORTHO05D003635 1.3e-27 126.7 129 65.9
SGA_v2.0_scaffold275G46578 Striga asiatica HOM05D003234 ORTHO05D003635 1.7e-27 126.3 130 63.1
Lalb_Chr01g0008381 Lupinus albus HOM05D003234 ORTHO05D003635 2.2e-27 125.9 130 64.6
CAN.G311.99 Capsicum annuum HOM05D003234 ORTHO05D003635 1.9e-26 122.9 130 62.3
CSS0034652 Camellia sinensis var. sinensis HOM05D003234 ORTHO05D003635 2.1e-25 119.4 130 60.8
CDE02G2075 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 2.1e-22 109.4 130 55.4
ECA233G0660 Erigeron canadensis HOM05D003234 ORTHO05D003635 2.8e-22 109.0 111 60.4
HanXRQChr14g0428701 Helianthus annuus HOM05D003234 ORTHO05D003635 4.7e-22 108.2 129 54.3
TAR628G0584 Trochodendron aralioides HOM05D003234 ORTHO05D003635 4.7e-22 108.2 114 63.2
Peaxi162Scf00064g01012 Petunia axillaris HOM05D003234 ORTHO05D003635 1.5e-20 103.2 68 88.2
Sabra02G0010200 Salix brachista HOM05D003234 ORTHO05D003635 2.0e-20 102.8 68 86.8
BolC5t30606H Brassica oleracea HOM05D003234 ORTHO05D003635 2.6e-20 102.4 97 66.0
CDE09G0257 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 8.4e-19 97.4 130 50.8
SEGI_11040 Sequoiadendron giganteum HOM05D003234 ORTHO05D003635 8.4e-19 97.4 130 45.4
BraA07t31705Z Brassica rapa HOM05D003234 ORTHO05D003635 2.4e-18 95.9 67 83.6
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 6.6e-16 87.8 109 50.5
PSO170G0681 Papaver somniferum HOM05D003234 ORTHO05D003635 8.7e-16 87.4 98 59.2
ATR0733G120 Amborella trichopoda HOM05D003234 ORTHO05D003635 3.3e-15 85.5 130 43.1
PSO210G7820 Papaver somniferum HOM05D003234 ORTHO05D003635 7.3e-15 84.3 91 59.3
Aqoxy5G01648 Aquilegia oxysepala HOM05D003234 ORTHO05D003635 2.2e-11 72.8 130 39.2
COL.COLO4_21608 Corchorus olitorius HOM05D003234 ORTHO05D003635 1.4e-10 70.1 37 91.9
BcaC08g45540 Brassica carinata HOM05D003234 ORTHO05D003635 1.9e-10 69.7 37 91.9
BolC6t38341H Brassica oleracea HOM05D003234 ORTHO05D003635 1.9e-10 69.7 37 91.9
MSTRG.23532 Avicennia marina HOM05D003234 ORTHO05D003635 3.2e-10 68.9 130 38.5
Manes.01G134700 Manihot esculenta HOM05D003234 ORTHO05D003635 4.2e-10 68.6 130 38.5
GSVIVG01018978001 Vitis vinifera HOM05D003234 ORTHO05D003635 1.2e-09 67.0 130 37.7
Aqoxy6G01093 Aquilegia oxysepala HOM05D003234 ORTHO05D003635 1.6e-09 66.6 131 35.1
TAR625G0832 Trochodendron aralioides HOM05D003234 ORTHO05D003635 2.1e-09 66.2 68 64.7
TAR376G0434 Trochodendron aralioides HOM05D003234 ORTHO05D003635 2.7e-09 65.9 36 88.9
CSS0031108 Camellia sinensis var. sinensis HOM05D003234 ORTHO05D003635 3.5e-09 65.5 130 38.5
Lsat_1_v5_gn_3_77600 Lactuca sativa HOM05D003234 ORTHO05D003635 3.5e-09 65.5 130 35.4
SEGI_02230 Sequoiadendron giganteum HOM05D003234 ORTHO05D003635 1.0e-08 63.9 95 42.1
A07p15660 Brassica napus HOM05D003234 ORTHO05D003635 1.7e-08 63.2 46 76.1
A07p15770 Brassica napus HOM05D003234 ORTHO05D003635 1.7e-08 63.2 46 76.1
CANSAT01G1184 Cannabis sativa HOM05D003234 ORTHO05D003635 3.0e-08 62.4 130 36.2
CARHR069740 Cardamine hirsuta HOM05D003234 ORTHO05D003635 3.0e-08 62.4 50 74.0
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 3.9e-08 62.0 130 38.5
Actinidia36555 Actinidia chinensis HOM05D003234 ORTHO05D003635 5.1e-08 61.6 130 38.5
Hma1.2p1_0717F.1_g208130 Hydrangea macrophylla HOM05D003234 ORTHO05D003635 5.1e-08 61.6 130 34.6
ECA246G3301 Erigeron canadensis HOM05D003234 ORTHO05D003635 6.6e-08 61.2 131 35.9
HanXRQChr15g0482261 Helianthus annuus HOM05D003234 ORTHO05D003635 8.7e-08 60.8 130 33.1
Ah.00g000460 Amaranthus hybridus HOM05D003234 ORTHO05D003635 1.1e-07 60.5 36 80.6
Actinidia12120 Actinidia chinensis HOM05D003234 ORTHO05D003635 2.5e-07 59.3 130 37.7
Migut.H00998 Erythranthe guttata HOM05D003234 ORTHO05D003635 2.5e-07 59.3 130 36.2
Cc07_g09430 Coffea canephora HOM05D003234 ORTHO05D003635 5.6e-07 58.2 129 37.2
BolC2t09366H Brassica oleracea HOM05D003234 ORTHO05D003635 7.3e-07 57.8 32 84.4
Mapoly0075s0049 Marchantia polymorpha HOM05D003234 ORTHO05D003635 7.3e-07 57.8 126 35.7
Thecc.01G037000 Theobroma cacao HOM05D003234 ORTHO05D003635 1.6e-06 56.6 130 33.1
CiPaw.02G016600 Carya illinoinensis HOM05D003234 ORTHO05D003635 4.8e-06 55.1 130 34.6
Dinv39975 Davidia involucrata HOM05D003234 ORTHO05D003635 4.8e-06 55.1 130 33.8
Rhsim07G0254000 Rhododendron simsii HOM05D003234 ORTHO05D003635 4.8e-06 55.1 110 43.6


User provided reference genes

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