Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 1.7e-52 209.1 110 100.0
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 1.3e-33 146.4 106 72.6
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 2.3e-33 145.6 110 70.9
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 5.0e-33 144.4 107 72.9
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 1.9e-32 142.5 108 66.7
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 2.5e-32 142.1 108 70.4
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 3.3e-32 141.7 110 71.8
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 3.3e-32 141.7 110 69.1
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 1.2e-31 139.8 110 68.2
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 1.6e-31 139.4 110 68.2
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 2.1e-31 139.0 110 69.1
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 2.8e-31 138.7 110 70.0
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 2.8e-31 138.7 109 69.7
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 3.6e-31 138.3 101 71.3
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 3.6e-31 138.3 110 70.0
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 4.7e-31 137.9 109 69.7
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 6.2e-31 137.5 109 69.7
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 6.2e-31 137.5 107 71.0
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 8.1e-31 137.1 108 67.6
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 1.1e-30 136.7 109 69.7
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 2.3e-30 135.6 109 67.0
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 3.1e-30 135.2 109 66.1
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 4.0e-30 134.8 109 67.9
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 8.9e-30 133.7 101 69.3
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 1.2e-29 133.3 110 65.5
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 1.5e-29 132.9 110 65.5
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 1.5e-29 132.9 108 65.7
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 3.4e-29 131.7 111 68.5
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 4.4e-29 131.3 110 64.5
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 5.8e-29 131.0 101 69.3
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 5.8e-29 131.0 101 69.3
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 7.5e-29 130.6 104 68.3
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 1.7e-28 129.4 110 64.5
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 2.9e-28 128.6 102 68.6
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 3.7e-28 128.3 104 67.3
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 3.7e-28 128.3 103 63.1
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 4.9e-28 127.9 111 66.7
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 6.4e-28 127.5 104 65.4
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 8.3e-28 127.1 110 64.5
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 8.3e-28 127.1 104 65.4
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 1.1e-27 126.7 110 63.6
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 1.1e-27 126.7 110 62.7
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 1.4e-27 126.3 108 62.0
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 1.4e-27 126.3 107 64.5
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 1.4e-27 126.3 109 64.2
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 7.1e-27 124.0 107 64.5
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 7.1e-27 124.0 107 64.5
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 1.2e-26 123.2 110 65.5
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 1.6e-26 122.9 108 63.0
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 1.6e-26 122.9 109 62.4
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 1.6e-26 122.9 110 62.7
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 2.7e-26 122.1 109 63.3
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 6.0e-26 120.9 105 63.8
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 6.0e-26 120.9 109 61.5
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 6.0e-26 120.9 102 61.8
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 7.8e-26 120.6 103 64.1
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 7.8e-26 120.6 110 60.0
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 7.8e-26 120.6 110 61.8
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 1.3e-25 119.8 95 68.4
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 1.3e-25 119.8 110 61.8
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 2.3e-25 119.0 106 62.3
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 3.0e-25 118.6 110 62.7
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 3.0e-25 118.6 92 68.5
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 5.1e-25 117.9 101 63.4
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 8.6e-25 117.1 108 63.0
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 8.6e-25 117.1 108 63.0
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 1.1e-24 116.7 106 65.1
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 4.3e-24 114.8 109 62.4
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 5.6e-24 114.4 113 57.5
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 5.6e-24 114.4 101 60.4
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 7.3e-24 114.0 92 65.2
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 9.5e-24 113.6 113 57.5
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 1.2e-23 113.2 113 57.5
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 1.2e-23 113.2 108 56.5
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 1.6e-23 112.8 108 58.3
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 2.1e-23 112.5 113 56.6
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 2.1e-23 112.5 109 60.6
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 1.1e-22 110.2 113 55.8
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 1.1e-22 110.2 113 55.8
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 1.1e-22 110.2 113 55.8
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 1.1e-22 110.2 113 55.8
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 1.1e-22 110.2 113 55.8
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 1.1e-22 110.2 113 55.8
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 1.1e-22 110.2 113 54.9
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 1.4e-22 109.8 113 54.0
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 1.8e-22 109.4 110 56.4
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 4.0e-22 108.2 96 59.4
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 5.2e-22 107.8 81 70.4
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 5.2e-22 107.8 113 54.9
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 8.9e-22 107.1 108 57.4
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 1.5e-21 106.3 108 56.5
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 3.4e-21 105.1 88 61.4
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 5.8e-21 104.4 113 53.1
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 7.6e-21 104.0 115 51.3
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 3.8e-20 101.7 115 52.2
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 1.1e-19 100.1 113 52.2
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 9.2e-19 97.1 88 54.5
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 2.7e-18 95.5 110 50.0
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 4.6e-18 94.7 91 54.9
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 6.0e-18 94.4 88 54.5
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 2.4e-11 72.4 71 53.5
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 2.4e-11 72.4 71 53.5
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 9.3e-11 70.5 96 39.6
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 4.6e-10 68.2 104 39.4
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 7.8e-10 67.4 89 38.2
Hma1.2p1_1523F.1_g288770 Hydrangea macrophylla HOM05D002849 ORTHO05D009472 6.9e-06 54.3 52 50.0


User provided reference genes

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