Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 7.2e-37 156.8 81 100.0
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 4.1e-32 141.0 81 90.1
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 7.8e-31 136.7 81 86.4
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 7.8e-31 136.7 81 88.9
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 2.9e-30 134.8 80 87.5
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 2.9e-30 134.8 81 85.2
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 1.1e-29 132.9 81 85.2
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 3.3e-29 131.3 81 82.7
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 4.3e-29 131.0 81 80.2
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 9.5e-29 129.8 81 80.2
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 1.2e-28 129.4 81 84.0
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 1.2e-28 129.4 81 84.0
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 1.6e-28 129.0 81 82.7
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.6e-28 129.0 81 81.5
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 2.8e-28 128.3 81 77.8
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 3.6e-28 127.9 81 82.7
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 3.6e-28 127.9 81 77.8
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 4.7e-28 127.5 81 77.8
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 4.7e-28 127.5 81 77.8
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 4.7e-28 127.5 81 82.7
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 6.1e-28 127.1 80 77.5
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 1.8e-27 125.6 80 76.2
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 3.0e-27 124.8 80 82.5
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 3.0e-27 124.8 81 81.5
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 4.0e-27 124.4 81 77.8
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 4.0e-27 124.4 81 77.8
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 5.2e-27 124.0 76 84.2
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 6.8e-27 123.6 81 80.2
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 8.9e-27 123.2 80 76.2
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 8.9e-27 123.2 81 76.5
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 1.5e-26 122.5 78 80.8
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 1.5e-26 122.5 76 84.2
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 1.5e-26 122.5 80 76.2
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 1.5e-26 122.5 81 77.8
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 3.4e-26 121.3 81 79.0
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 3.4e-26 121.3 81 76.5
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 3.4e-26 121.3 76 82.9
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 3.4e-26 121.3 81 77.8
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 5.7e-26 120.6 76 82.9
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 5.7e-26 120.6 80 75.0
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 7.5e-26 120.2 81 74.1
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 9.8e-26 119.8 80 76.2
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 1.3e-25 119.4 79 78.5
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 1.3e-25 119.4 76 81.6
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.3e-25 119.4 76 84.2
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 1.3e-25 119.4 74 86.5
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 1.7e-25 119.0 76 81.6
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 1.7e-25 119.0 76 80.3
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 2.2e-25 118.6 80 75.0
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 2.2e-25 118.6 81 75.3
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 2.9e-25 118.2 76 82.9
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 2.9e-25 118.2 79 78.5
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 4.9e-25 117.5 81 75.3
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 4.9e-25 117.5 79 74.7
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 6.4e-25 117.1 79 74.7
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 8.3e-25 116.7 81 74.1
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 8.3e-25 116.7 81 76.5
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 1.1e-24 116.3 79 73.4
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 1.4e-24 115.9 81 71.6
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 1.4e-24 115.9 74 79.7
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 1.8e-24 115.5 81 74.1
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 2.4e-24 115.2 81 74.1
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 2.4e-24 115.2 81 74.1
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 3.2e-24 114.8 76 76.3
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 5.4e-24 114.0 81 72.8
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 7.0e-24 113.6 81 74.1
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 7.0e-24 113.6 81 72.8
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 7.0e-24 113.6 81 70.4
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 9.2e-24 113.2 81 71.6
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-23 112.1 72 77.8
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 3.5e-23 111.3 76 76.3
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 4.6e-23 110.9 76 76.3
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 7.8e-23 110.2 76 75.0
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 1.0e-22 109.8 74 75.7
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 2.3e-22 108.6 81 69.1
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 1.1e-21 106.3 75 74.7
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 1.5e-21 105.9 80 70.0
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 1.9e-21 105.5 74 73.0
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 2.5e-21 105.1 73 72.6
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 3.3e-21 104.8 81 66.7
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 3.3e-21 104.8 81 67.9
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 1.6e-20 102.4 75 70.7
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.8e-19 99.0 64 79.7
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 2.6e-18 95.1 68 73.5
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 3.4e-18 94.7 81 64.2
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 2.2e-17 92.0 59 79.7
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 7.0e-16 87.0 78 56.4
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 2.0e-15 85.5 59 72.9
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 2.0e-15 85.5 134 42.5
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 1.0e-14 83.2 70 62.9
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 2.3e-14 82.0 78 55.1
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 3.9e-14 81.3 78 53.8
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 6.2e-12 73.9 45 77.8
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 2.3e-11 72.0 44 79.5
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 7.5e-10 67.0 45 68.9
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 2.2e-09 65.5 38 81.6
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 2.9e-09 65.1 44 72.7
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 2.9e-09 65.1 44 72.7
BcaC03g17585 Brassica carinata HOM05D007648 ORTHO05D009613 6.6e-06 53.9 80 46.2
MCO07G444 Micromonas commoda HOM05D007648 ORTHO05D009613 6.6e-06 53.9 71 43.7


User provided reference genes

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