Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 1.6e-83 312.8 162 100.0
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 6.0e-59 231.1 153 77.1
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 3.3e-57 225.3 157 77.1
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 7.4e-57 224.2 155 75.5
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 1.3e-56 223.4 153 73.9
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 2.1e-56 222.6 157 76.4
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 2.8e-56 222.2 150 74.7
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 1.1e-55 220.3 154 75.3
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 1.8e-55 219.5 154 74.7
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 1.8e-55 219.5 154 74.7
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 3.1e-55 218.8 152 73.7
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 4.1e-55 218.4 154 74.7
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 6.9e-55 217.6 148 73.6
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 9.0e-55 217.2 153 71.9
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 9.0e-55 217.2 152 71.7
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.2e-54 216.9 153 71.2
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 2.0e-54 216.1 152 72.4
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 2.6e-54 215.7 157 74.5
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 1.0e-53 213.8 158 72.8
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 5.5e-52 208.0 160 70.6
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 7.2e-52 207.6 157 70.1
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 1.6e-51 206.5 157 72.0
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 6.1e-51 204.5 142 78.2
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 1.0e-50 203.8 158 68.4
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.0e-50 203.8 133 75.2
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.3e-50 203.4 155 70.3
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 3.0e-50 202.2 152 71.1
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 3.9e-50 201.8 136 75.7
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 3.3e-49 198.7 155 66.5
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 5.7e-49 198.0 128 75.0
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.3e-48 196.8 142 72.5
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 1.3e-48 196.8 157 64.3
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.6e-48 196.4 124 79.0
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.6e-48 196.4 151 68.2
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 2.2e-48 196.1 151 67.5
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 2.8e-48 195.7 155 68.4
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 4.8e-48 194.9 155 69.7
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 8.2e-48 194.1 155 67.1
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 1.1e-47 193.7 156 67.9
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 1.4e-47 193.4 138 71.0
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 1.4e-47 193.4 127 74.8
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 1.8e-47 193.0 158 66.5
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 2.4e-47 192.6 131 75.6
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 3.1e-47 192.2 154 64.3
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 3.1e-47 192.2 156 67.3
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 3.1e-47 192.2 130 74.6
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 3.1e-47 192.2 149 64.4
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 3.1e-47 192.2 149 64.4
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 4.1e-47 191.8 126 77.0
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 4.1e-47 191.8 150 67.3
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 6.9e-47 191.0 132 70.5
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 9.0e-47 190.7 148 64.2
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 9.0e-47 190.7 136 72.8
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 1.2e-46 190.3 124 76.6
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.2e-46 190.3 157 66.2
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 1.2e-46 190.3 124 75.0
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 1.5e-46 189.9 153 64.1
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 1.5e-46 189.9 125 75.2
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 2.6e-46 189.1 124 75.0
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 3.4e-46 188.7 124 75.0
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 2.2e-45 186.0 149 63.8
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 2.9e-45 185.7 126 75.4
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 2.9e-45 185.7 155 65.8
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 2.9e-45 185.7 138 68.8
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 3.8e-45 185.3 151 65.6
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 5.0e-45 184.9 157 66.2
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 5.0e-45 184.9 161 64.6
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 1.1e-44 183.7 150 64.7
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 1.4e-44 183.3 124 72.6
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.4e-44 183.3 123 72.4
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.4e-44 183.3 124 71.0
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.9e-44 183.0 142 65.5
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 2.5e-44 182.6 149 61.7
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 4.2e-44 181.8 125 70.4
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 5.5e-44 181.4 131 70.2
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 7.2e-44 181.0 122 71.3
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.6e-43 179.9 153 61.4
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 1.0e-42 177.2 125 70.4
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 2.3e-42 176.0 154 59.1
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 3.9e-42 175.3 159 60.4
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 3.9e-42 175.3 152 63.2
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 5.1e-42 174.9 153 61.4
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 6.7e-42 174.5 150 58.7
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 3.3e-41 172.2 150 64.0
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 5.7e-41 171.4 152 62.5
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 9.7e-41 170.6 146 58.2
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 1.3e-40 170.2 129 65.1
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 1.7e-40 169.9 148 60.8
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 6.3e-40 167.9 118 72.9
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 8.2e-40 167.5 116 70.7
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 1.1e-39 167.2 129 63.6
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 1.4e-39 166.8 146 65.8
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 2.4e-39 166.0 130 65.4
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 5.3e-39 164.9 129 65.1
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.2e-38 163.7 142 62.0
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 2.0e-38 162.9 118 70.3
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 3.4e-38 162.2 129 65.1
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 4.5e-38 161.8 149 59.1
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.0e-37 160.6 126 65.1
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 1.3e-37 160.2 150 59.3
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 5.0e-37 158.3 149 55.0
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 7.2e-36 154.5 126 62.7
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 3.6e-35 152.1 131 61.8
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 1.0e-34 150.6 130 58.5
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 3.0e-34 149.1 134 59.7
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 3.9e-34 148.7 123 59.3
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 5.1e-34 148.3 103 72.8
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 5.1e-34 148.3 152 54.6
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 1.7e-32 143.3 152 53.3
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 2.9e-29 132.5 134 51.5
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 5.0e-29 131.7 90 72.2
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 4.7e-27 125.2 122 50.8
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.1e-25 120.6 146 48.6
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 4.8e-24 115.2 119 54.6
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 1.4e-23 113.6 119 51.3
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.6e-22 110.2 125 48.8
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 2.2e-21 106.3 150 44.7
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 5.2e-18 95.1 95 56.8
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 2.0e-17 93.2 125 48.8
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 2.6e-17 92.8 81 55.6
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 1.3e-16 90.5 111 42.3
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 1.9e-12 76.6 117 42.7
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 3.2e-12 75.9 84 57.1
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.2e-11 73.9 117 38.5
BcaC08g47102 Brassica carinata HOM05D006402 ORTHO05D008099 6.1e-11 71.6 62 62.9


User provided reference genes

Program Settings