Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 2.6e-127 458.8 234 100.0
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 5.8e-63 245.0 253 62.5
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 3.3e-58 229.2 243 62.6
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 1.3e-57 227.3 245 61.2
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.6e-57 226.9 243 63.0
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 2.8e-49 199.5 261 55.9
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 5.3e-48 195.3 270 53.3
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.1e-45 187.6 265 52.5
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 2.1e-44 183.3 260 50.8
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.1e-44 183.3 264 53.0
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 2.7e-44 183.0 252 51.2
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 2.7e-44 183.0 248 49.2
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 4.6e-44 182.2 263 51.0
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 4.6e-44 182.2 243 51.4
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.8e-43 180.3 242 52.5
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 4.4e-42 175.6 269 50.2
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.3e-41 174.1 264 51.5
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 2.2e-41 173.3 262 49.6
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 2.8e-41 172.9 241 51.0
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 3.7e-41 172.6 258 54.3
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.4e-40 170.6 250 53.6
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.8e-40 170.2 250 53.6
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 9.1e-40 167.9 249 50.6
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 3.4e-39 166.0 286 45.5
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 5.0e-38 162.2 274 45.3
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 1.1e-37 161.0 171 61.4
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.9e-37 160.2 241 47.3
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 2.5e-37 159.8 280 48.2
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 5.5e-37 158.7 211 52.6
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 3.6e-36 156.0 241 49.4
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 6.1e-36 155.2 243 47.7
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 7.9e-36 154.8 208 51.0
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 5.2e-35 152.1 211 50.7
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 8.8e-35 151.4 230 47.4
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.5e-34 150.6 235 47.2
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.1e-32 142.9 260 46.9
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 4.1e-32 142.5 225 49.8
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.6e-31 140.6 147 59.9
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 4.5e-31 139.0 237 43.0
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 5.9e-31 138.7 239 45.2
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.3e-30 137.5 223 47.5
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 5.0e-30 135.6 240 47.5
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 8.5e-30 134.8 239 45.6
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 1.5e-29 134.0 283 43.1
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 5.5e-29 132.1 276 43.5
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 1.2e-28 131.0 256 45.3
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.2e-28 131.0 222 48.2
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.1e-28 130.2 252 44.8
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.1e-28 130.2 252 44.8
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 2.7e-28 129.8 245 46.5
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 4.7e-28 129.0 236 43.6
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 1.8e-27 127.1 242 44.6
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 8.8e-27 124.8 203 43.8
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 2.0e-26 123.6 246 42.7
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.3e-26 122.9 241 41.1
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 3.7e-25 119.4 235 40.9
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 6.3e-25 118.6 241 40.2
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 6.3e-25 118.6 264 41.7
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.4e-24 116.7 241 39.8
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 3.5e-23 112.8 177 49.7
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.0e-22 111.3 262 39.3
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 1.3e-22 110.9 247 42.9
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 1.5e-21 107.5 225 39.6
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 3.2e-21 106.3 240 40.0
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 5.5e-21 105.5 240 40.0
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 7.2e-21 105.1 240 38.3
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 6.1e-20 102.1 242 37.6
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 1.5e-18 97.4 126 51.6
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 5.7e-18 95.5 211 38.9
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 7.5e-18 95.1 269 36.1
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 1.7e-17 94.0 190 40.5
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 1.7e-17 94.0 241 37.8
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 2.2e-17 93.6 189 41.8
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 3.7e-17 92.8 190 40.5
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 4.8e-17 92.4 226 41.6
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 1.2e-15 87.8 198 42.9
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 2.3e-14 83.6 119 44.5
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 5.0e-14 82.4 229 38.0
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 7.2e-13 78.6 197 41.6
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 9.5e-13 78.2 245 33.5
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 1.2e-12 77.8 195 39.5
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 1.5e-10 70.9 159 40.9
MELO3C011356.2 Cucumis melo HOM05D007731 ORTHO05D008483 9.8e-10 68.2 166 37.3
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 9.8e-10 68.2 95 48.4
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 1.7e-09 67.4 172 37.8
ATR0712G013 Amborella trichopoda HOM05D007731 ORTHO05D008483 2.2e-09 67.0 183 31.7
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 2.8e-09 66.6 127 42.5
AUR62041477 Chenopodium quinoa HOM05D007731 ORTHO05D008483 1.1e-08 64.7 149 34.2
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 1.1e-08 64.7 95 41.1
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 1.4e-08 64.3 95 41.1
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 1.8e-08 63.9 235 29.8
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 1.8e-08 63.9 235 29.8
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 1.8e-08 63.9 235 29.8
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 1.8e-08 63.9 54 59.3
Sabra08G0162400 Salix brachista HOM05D001921 ORTHO05D001784 2.4e-08 63.5 95 43.2
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 5.4e-08 62.4 208 31.7
Manes.15G019800 Manihot esculenta HOM05D001921 ORTHO05D001784 5.4e-08 62.4 95 38.9
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 7.0e-08 62.0 209 31.1
Hma1.2p1_0511F.1_g169240 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 7.0e-08 62.0 95 43.2
Phvul.006G158900 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 7.0e-08 62.0 116 37.1
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 1.6e-07 60.8 56 51.8
Duzib212G0985 Durio zibethinus HOM05D001921 ORTHO05D001784 1.6e-07 60.8 106 36.8
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 2.0e-07 60.5 181 35.4
QL06p006408 Quercus lobata HOM05D001921 ORTHO05D001784 3.5e-07 59.7 95 37.9
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 4.5e-07 59.3 235 30.2
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.5e-07 59.3 95 38.9
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.5e-07 59.3 95 38.9
Lj6g0003156 Lotus japonicus HOM05D001921 ORTHO05D001784 4.5e-07 59.3 95 35.8
Lj6g0019677 Lotus japonicus HOM05D001921 ORTHO05D001784 4.5e-07 59.3 95 35.8
Phvul.001G005800 Phaseolus vulgaris HOM05D032462 ORTHO05D035917 4.5e-07 59.3 220 32.3
Gohir.A09G060900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.9e-07 58.9 95 38.9
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 7.8e-07 58.5 235 30.2
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 7.8e-07 58.5 235 31.5
Glyma.13G212500 Glycine max HOM05D001921 ORTHO05D001784 7.8e-07 58.5 116 35.3
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 7.8e-07 58.5 242 30.2
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 1.0e-06 58.2 235 30.2
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 1.0e-06 58.2 238 29.4
Gohir.D09G059900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.0e-06 58.2 95 38.9
Gorai.006G074600 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.0e-06 58.2 95 38.9
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.0e-06 58.2 95 40.0
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 1.3e-06 57.8 235 29.4
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 1.3e-06 57.8 237 28.7
Medtr2g020830 Medicago truncatula HOM05D001921 ORTHO05D001784 1.3e-06 57.8 95 35.8
BcaC07g39017 Brassica carinata HOM05D009961 ORTHO05D008483 1.7e-06 57.4 54 46.3
C08p19900 Brassica napus HOM05D009961 ORTHO05D008483 1.7e-06 57.4 54 46.3
BolC8t49628H Brassica oleracea HOM05D009961 ORTHO05D008483 1.7e-06 57.4 54 46.3
arahy.Tifrunner.gnm1.ann1.288BMH Arachis hypogaea HOM05D001921 ORTHO05D001784 2.3e-06 57.0 139 31.7
arahy.Tifrunner.gnm1.ann1.XA6I97 Arachis hypogaea HOM05D001921 ORTHO05D001784 2.3e-06 57.0 139 31.7
Thecc.04G273300 Theobroma cacao HOM05D001921 ORTHO05D001784 2.9e-06 56.6 106 34.9
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 2.9e-06 56.6 189 30.7
Thhalv10008606m.g Eutrema salsugineum HOM05D009961 ORTHO05D008483 5.0e-06 55.8 213 28.6
unitig_749.g13899 Utricularia gibba HOM05D007731 ORTHO05D008483 5.0e-06 55.8 193 31.6
VMungo0647G0644 Vigna mungo HOM05D032462 ORTHO05D035917 5.0e-06 55.8 223 31.8
ATR0580G129 Amborella trichopoda HOM05D001921 ORTHO05D001784 6.6e-06 55.5 99 39.4
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 6.6e-06 55.5 239 27.6


User provided reference genes

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