Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 4.1e-223 777.7 380 100.0
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 4.1e-167 591.7 427 68.9
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 7.0e-167 590.9 382 74.1
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 6.0e-166 587.8 380 73.2
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 3.0e-165 585.5 381 72.2
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 2.1e-163 579.3 379 71.5
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 1.4e-162 576.6 381 71.1
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.2e-161 573.5 380 69.7
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 1.5e-161 573.2 380 70.5
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 3.4e-161 572.0 380 70.5
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 4.4e-161 571.6 380 70.5
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 1.3e-160 570.1 378 70.9
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 4.9e-160 568.2 379 69.9
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 1.4e-159 566.6 380 70.8
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.4e-159 566.6 380 70.0
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 1.6e-158 563.1 380 70.5
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 2.1e-158 562.8 377 70.3
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 7.8e-158 560.8 381 73.0
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.0e-157 560.5 375 72.3
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 1.9e-156 556.2 380 69.2
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.5e-156 555.8 380 68.4
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 4.3e-156 555.1 380 67.9
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 2.1e-155 552.7 379 69.9
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 3.6e-155 552.0 380 68.4
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 4.0e-154 548.5 378 68.0
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 5.8e-153 544.7 379 67.0
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.9e-152 542.3 379 66.8
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.9e-152 542.3 379 66.8
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 6.4e-152 541.2 377 67.9
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 7.1e-151 537.7 379 66.8
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 1.6e-150 536.6 380 66.1
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 7.8e-150 534.3 380 66.6
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.0e-149 533.9 380 67.4
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.7e-149 533.1 377 68.2
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 1.7e-149 533.1 376 67.6
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 2.3e-149 532.7 376 68.4
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 3.9e-149 531.9 380 66.6
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 5.1e-149 531.6 380 66.3
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 6.6e-149 531.2 375 68.5
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 8.7e-149 530.8 379 66.0
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 1.5e-148 530.0 380 66.6
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 2.5e-148 529.3 378 67.7
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 5.6e-148 528.1 375 68.0
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 2.8e-147 525.8 380 67.4
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 4.7e-147 525.0 383 64.5
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 3.1e-146 522.3 412 60.9
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 5.2e-146 521.5 358 68.2
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 4.4e-145 518.5 381 67.2
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 1.3e-144 516.9 398 63.1
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 6.4e-144 514.6 379 65.2
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 1.1e-143 513.8 381 64.3
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 4.2e-143 511.9 376 66.0
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 2.1e-142 509.6 364 67.9
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 7.8e-142 507.7 385 63.1
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.3e-141 506.9 364 67.6
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 3.9e-141 505.4 381 63.3
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 3.9e-141 505.4 378 63.2
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 6.6e-141 504.6 379 62.8
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 8.7e-141 504.2 379 62.0
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 1.9e-140 503.1 380 61.6
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 2.5e-140 502.7 381 63.0
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 2.5e-140 502.7 383 62.7
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 2.1e-139 499.6 384 62.2
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 2.1e-139 499.6 375 62.9
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 3.6e-139 498.8 374 61.5
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 3.1e-138 495.7 354 66.7
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 5.3e-138 495.0 376 60.9
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 6.9e-138 494.6 389 60.4
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 9.0e-138 494.2 381 62.2
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 2.2e-136 489.6 382 62.0
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 2.2e-136 489.6 382 62.0
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 2.9e-136 489.2 376 60.1
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 4.9e-136 488.4 359 64.9
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 4.9e-136 488.4 381 63.0
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 7.1e-135 484.6 375 63.7
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.2e-134 483.8 375 64.0
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 6.0e-134 481.5 353 63.7
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 5.1e-133 478.4 377 61.5
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 5.6e-132 474.9 382 61.8
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.3e-131 473.8 375 62.9
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 2.1e-131 473.0 376 59.6
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 2.1e-131 473.0 380 61.8
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.3e-125 453.0 327 66.7
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.5e-124 450.3 376 60.1
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 1.5e-124 450.3 325 67.7
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 7.4e-124 448.0 379 56.7
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 5.3e-122 441.8 304 67.8
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 2.6e-121 439.5 380 58.7
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.1e-119 434.1 401 55.1
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.1e-119 434.1 377 53.8
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 5.5e-119 431.8 305 68.5
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 1.6e-118 430.3 379 57.8
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 3.5e-118 429.1 378 54.5
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 8.7e-117 424.5 376 54.8
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 1.6e-115 420.2 288 68.8
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 1.6e-115 420.2 280 71.8
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.8e-114 416.8 358 58.1
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 9.0e-114 414.5 377 52.0
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 8.5e-112 407.9 379 53.8
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.9e-111 406.8 379 55.9
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 7.2e-111 404.8 383 53.5
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 1.5e-108 397.1 259 73.4
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 2.4e-106 389.8 397 53.1
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 2.0e-100 370.2 307 59.6
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 9.4e-95 351.3 343 52.2
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 1.6e-94 350.5 256 65.2
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 6.7e-93 345.1 225 72.4
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 8.8e-93 344.7 287 57.8
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 7.7e-89 331.6 386 43.8
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 4.0e-85 319.3 218 68.3
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 7.5e-84 315.1 376 43.9
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 2.2e-80 303.5 378 41.8
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 1.1e-79 301.2 364 42.9
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 5.9e-73 278.9 183 71.0
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 6.1e-62 242.3 387 33.3
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 1.2e-60 238.0 196 56.6
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 2.9e-51 206.8 164 58.5
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 4.0e-45 186.4 151 62.3
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 2.3e-32 144.1 86 81.4
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 5.6e-31 139.4 112 59.8
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 1.1e-29 135.2 118 55.9
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 4.9e-27 126.3 204 39.2
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 6.2e-14 82.8 50 74.0
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 2.6e-12 77.4 77 49.4
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 1.7e-11 74.7 147 32.0


User provided reference genes

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