Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 0.0e+00 1481.8 769 100.0
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 8.5e-244 847.4 780 63.7
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.4e-243 846.7 771 64.3
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 2.2e-204 716.5 744 57.3
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 2.9e-204 716.1 692 63.2
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 8.9e-185 651.4 792 51.5
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 4.4e-168 595.9 798 48.6
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 2.2e-167 593.6 789 49.3
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 1.0e-164 584.7 789 48.3
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 7.8e-157 558.5 810 46.8
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 2.3e-156 557.0 782 48.2
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 5.3e-153 545.8 803 46.6
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 2.1e-149 533.9 795 46.8
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 4.6e-149 532.7 819 46.2
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 6.7e-148 528.9 798 46.5
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 1.1e-145 521.5 703 49.4
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 3.1e-137 493.4 800 45.9
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 7.1e-134 482.3 707 47.7
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 9.3e-134 481.9 800 43.5
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.1e-133 480.7 736 46.5
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.8e-132 477.6 766 43.6
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.1e-131 474.9 724 45.4
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.2e-130 470.7 809 41.9
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 6.3e-130 469.2 819 42.6
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 5.3e-129 466.1 776 43.0
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 7.6e-128 462.2 743 44.4
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 7.2e-126 455.7 724 43.8
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 9.3e-126 455.3 669 46.5
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.9e-124 449.9 820 43.0
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 6.7e-124 449.1 760 44.7
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 2.6e-120 437.2 825 41.8
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 4.5e-120 436.4 737 43.6
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.5e-118 430.6 757 43.5
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 3.7e-114 416.8 683 42.9
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 3.5e-104 383.6 564 47.2
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.2e-101 375.2 785 39.1
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 2.1e-93 347.8 738 38.5
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 8.0e-93 345.9 715 38.9
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 6.8e-92 342.8 782 38.1
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 2.6e-91 340.9 745 38.1
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.8e-90 337.4 740 38.6
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 6.3e-90 336.3 801 35.7
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.8e-89 334.7 744 37.6
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 4.1e-89 333.6 733 37.2
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 2.0e-88 331.3 672 38.5
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 2.9e-87 327.4 750 36.9
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 3.8e-87 327.0 797 37.0
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 6.6e-87 326.2 754 37.1
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 7.2e-86 322.8 784 36.9
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 6.1e-85 319.7 733 37.5
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 2.8e-82 310.8 728 37.6
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 6.3e-82 309.7 725 36.3
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.4e-81 307.8 718 36.8
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 3.3e-78 297.4 810 34.1
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 4.3e-78 297.0 387 48.6
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.2e-77 295.4 748 33.2
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 6.1e-77 293.1 740 36.4
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 2.3e-76 291.2 752 34.6
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 3.0e-76 290.8 680 35.9
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 5.2e-76 290.0 689 35.0
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.0e-71 275.8 426 43.4
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 1.7e-71 275.0 747 35.6
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 8.6e-71 272.7 704 33.8
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 8.6e-71 272.7 702 33.6
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 1.5e-70 271.9 704 33.5
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 2.5e-70 271.2 644 36.0
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 5.6e-70 270.0 719 32.0
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 2.1e-69 268.1 728 34.5
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 2.6e-67 261.2 706 32.6
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 3.4e-67 260.8 704 33.0
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 7.5e-67 259.6 696 34.5
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 2.2e-66 258.1 704 33.4
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.9e-66 257.7 592 38.0
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 1.1e-65 255.8 704 33.9
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 4.7e-61 240.4 740 32.8
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.5e-59 235.3 750 31.2
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 7.1e-57 226.5 621 32.4
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 1.0e-55 222.6 311 47.6
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.7e-55 221.9 684 31.1
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 3.3e-54 217.6 742 31.9
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 3.1e-52 211.1 684 31.9
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 9.2e-49 199.5 722 30.3
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 2.7e-48 198.0 607 33.1
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 3.5e-48 197.6 752 30.1
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 8.7e-47 193.0 626 30.2
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 8.7e-47 193.0 659 31.6
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.6e-39 166.8 345 44.3
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 1.1e-38 166.0 683 29.3
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 2.6e-35 154.8 551 30.9
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 5.8e-35 153.7 611 32.1
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.2e-34 151.8 275 40.0
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 1.4e-33 149.1 689 28.4
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.7e-32 144.8 326 41.7
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 4.6e-32 144.1 210 46.7
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 6.7e-31 140.2 674 27.9
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 1.1e-30 139.4 683 28.7
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 9.6e-30 136.3 683 28.1
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 4.0e-28 131.0 551 29.0
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 4.5e-27 127.5 706 27.2
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 7.6e-27 126.7 267 39.0
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 4.8e-21 107.5 733 24.4
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 2.6e-19 101.7 712 26.0
Atru.chr13.298 Acer truncatum HOM05D007378 ORTHO05D007577 2.2e-18 98.6 98 57.1
Atru.chr13.297 Acer truncatum HOM05D007378 ORTHO05D007577 7.9e-16 90.1 100 59.0
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 2.4e-12 78.6 412 26.7
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 2.0e-11 75.5 176 36.9
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 7.7e-11 73.6 427 26.2
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 1.7e-10 72.4 192 34.9
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 1.7e-10 72.4 556 25.2
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 5.0e-10 70.9 214 31.8
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 6.5e-10 70.5 244 32.8
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 4.2e-09 67.8 222 32.0
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 7.2e-09 67.0 242 31.8
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 1.2e-08 66.2 188 34.6
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.2e-08 66.2 130 40.0
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 2.1e-08 65.5 396 25.3
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 1.0e-07 63.2 126 35.7


User provided reference genes

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