Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 5.2e-90 334.3 165 100.0
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 5.2e-42 174.9 157 64.3
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 2.4e-39 166.0 130 73.1
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 2.8e-35 152.5 132 68.9
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 3.6e-35 152.1 129 66.7
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 6.2e-35 151.4 127 68.5
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.0e-33 146.4 128 67.2
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 2.6e-33 146.0 130 65.4
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 5.8e-33 144.8 134 60.4
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.6e-33 144.4 128 67.2
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 2.2e-32 142.9 130 65.4
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 3.8e-32 142.1 144 61.1
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.4e-31 140.2 128 65.6
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 1.4e-31 140.2 160 55.6
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.4e-31 139.4 120 65.8
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 3.2e-31 139.0 145 57.9
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.2e-31 138.7 145 57.9
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 6.0e-30 134.8 88 79.5
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 5.1e-29 131.7 121 65.3
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.9e-28 129.8 126 57.1
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 1.9e-28 129.8 125 61.6
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 2.5e-28 129.4 140 55.7
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 3.3e-28 129.0 120 59.2
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 3.3e-28 129.0 120 59.2
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 4.3e-28 128.6 131 58.8
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 7.3e-28 127.9 85 80.0
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 1.6e-27 126.7 88 76.1
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 1.6e-27 126.7 140 54.3
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 3.1e-26 122.5 148 55.4
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 5.3e-26 121.7 90 75.6
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 5.3e-26 121.7 124 57.3
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 5.3e-26 121.7 130 59.2
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 9.0e-26 120.9 134 56.0
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 3.4e-25 119.0 160 51.9
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 9.9e-25 117.5 93 66.7
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 1.7e-24 116.7 141 54.6
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.2e-24 116.3 89 73.0
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 2.9e-24 115.9 123 57.7
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.8e-24 115.5 89 73.0
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.4e-23 112.8 88 68.2
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 2.4e-23 112.8 137 50.4
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 9.3e-23 110.9 145 48.3
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 2.1e-22 109.8 92 65.2
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 4.6e-22 108.6 116 56.9
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 7.9e-22 107.8 87 66.7
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 7.9e-22 107.8 87 66.7
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 7.9e-22 107.8 100 65.0
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 1.0e-21 107.5 96 62.5
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 1.3e-21 107.1 122 58.2
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.3e-21 106.3 119 52.9
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 3.0e-21 105.9 131 52.7
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 3.9e-21 105.5 89 66.3
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 5.1e-21 105.1 128 50.8
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 1.1e-20 104.0 115 56.5
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.1e-20 104.0 132 53.0
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 1.5e-20 103.6 91 68.1
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 1.9e-20 103.2 132 55.3
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 7.4e-20 101.3 100 60.0
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 1.3e-19 100.5 77 72.7
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.3e-19 100.5 118 54.2
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 2.1e-19 99.8 113 53.1
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 1.8e-18 96.7 88 61.4
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 5.3e-18 95.1 94 56.4
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.2e-17 94.0 84 60.7
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 1.2e-17 94.0 94 58.5
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 2.6e-17 92.8 73 68.5
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 3.4e-17 92.4 131 51.1
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 2.9e-16 89.4 135 45.9
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 6.4e-16 88.2 89 58.4
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 1.1e-15 87.4 82 56.1
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 1.9e-15 86.7 74 58.1
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 2.4e-15 86.3 79 59.5
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 5.5e-15 85.1 74 63.5
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 7.1e-15 84.7 76 56.6
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 1.2e-14 84.0 87 60.9
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 1.2e-14 84.0 87 60.9
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 2.7e-14 82.8 87 59.8
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 3.5e-14 82.4 99 52.5
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 3.5e-14 82.4 99 52.5
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 3.5e-14 82.4 79 58.2
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 4.6e-14 82.0 80 58.8
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 6.0e-14 81.6 111 47.7
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 6.0e-14 81.6 111 47.7
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 6.0e-14 81.6 111 47.7
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 6.0e-14 81.6 81 54.3
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 1.0e-13 80.9 76 56.6
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.0e-13 80.9 76 55.3
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.0e-13 80.9 76 65.8
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 1.8e-13 80.1 87 58.6
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 1.8e-13 80.1 87 58.6
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.8e-13 80.1 75 58.7
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 3.0e-13 79.3 92 52.2
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 7.4e-12 74.7 73 53.4
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 9.6e-12 74.3 76 60.5
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 9.6e-12 74.3 79 58.2
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.3e-11 73.9 74 58.1
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 4.8e-11 72.0 76 57.9
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 1.4e-10 70.5 76 56.6
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 2.4e-10 69.7 76 56.6
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.4e-10 69.7 80 51.2
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 3.1e-10 69.3 109 42.2
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 4.5e-09 65.5 76 53.9
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 4.5e-09 65.5 76 53.9
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 3.2e-07 59.3 85 47.1
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 7.1e-07 58.2 115 37.4


User provided reference genes

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