Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 0.0e+00 1098.2 542 100.0
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 7.8e-252 873.6 542 78.6
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 6.8e-248 860.5 569 74.7
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 3.6e-241 838.2 542 75.8
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 5.4e-221 771.2 542 68.5
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 5.1e-219 764.6 542 68.8
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 6.9e-216 754.2 542 66.6
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 1.5e-215 753.1 543 66.5
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 4.9e-214 748.0 542 65.9
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 2.4e-213 745.7 542 67.2
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 7.1e-213 744.2 542 67.0
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.0e-211 740.3 542 66.8
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.3e-211 740.0 544 67.5
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 1.7e-211 739.6 542 66.2
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.3e-211 739.2 542 66.2
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 3.9e-211 738.4 545 66.2
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 8.1e-209 730.7 544 66.2
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 4.5e-207 724.9 544 66.4
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 2.9e-206 722.2 542 64.9
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 4.9e-206 721.5 543 63.9
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 2.4e-205 719.2 542 64.9
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 2.7e-204 715.7 542 63.5
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.5e-204 715.3 542 63.3
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 6.7e-203 711.1 542 62.7
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 6.2e-201 704.5 542 62.7
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 6.9e-200 701.0 543 61.1
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 1.2e-199 700.3 543 61.5
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 2.6e-199 699.1 543 60.6
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 1.1e-197 693.7 542 62.4
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 1.9e-197 693.0 542 63.5
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 3.2e-197 692.2 543 60.0
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 5.5e-197 691.4 543 62.4
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 7.1e-197 691.0 543 61.0
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.1e-196 689.5 545 62.8
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 6.0e-196 688.0 542 61.8
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 7.9e-196 687.6 543 59.7
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.8e-195 686.4 546 61.7
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 1.1e-194 683.7 543 58.9
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 1.1e-194 683.7 543 61.3
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 2.1e-193 679.5 544 59.2
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 2.8e-193 679.1 543 60.4
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 1.1e-192 677.2 542 60.5
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 4.1e-192 675.2 543 59.1
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 4.1e-192 675.2 542 60.1
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 5.3e-192 674.9 544 58.8
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 9.0e-192 674.1 542 60.0
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 9.0e-192 674.1 542 60.9
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 1.2e-191 673.7 542 61.3
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 1.0e-190 670.6 544 58.8
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 1.4e-189 666.8 543 58.6
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 9.3e-189 664.1 542 59.8
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 2.7e-188 662.5 544 60.8
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 3.0e-187 659.1 542 59.2
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 5.7e-186 654.8 575 56.2
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 7.4e-186 654.4 543 59.9
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 9.7e-186 654.1 470 67.4
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 2.8e-185 652.5 548 59.3
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 8.2e-185 651.0 565 56.6
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.1e-184 649.0 635 53.2
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 6.9e-184 647.9 542 57.9
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 9.0e-184 647.5 542 57.7
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 3.8e-182 642.1 542 56.6
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.1e-181 640.6 544 57.7
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 1.6e-180 636.7 544 57.4
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.0e-179 634.0 542 57.4
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 3.0e-179 632.5 546 58.4
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 8.8e-179 630.9 543 59.3
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.1e-178 630.6 430 72.3
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 2.5e-178 629.4 543 59.1
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 5.7e-178 628.2 543 55.8
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 9.7e-178 627.5 542 58.5
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 3.1e-176 622.5 544 58.8
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 4.1e-176 622.1 543 55.8
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 6.9e-176 621.3 539 56.8
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 9.1e-176 620.9 604 54.0
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 1.5e-175 620.2 491 60.7
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.9e-173 613.2 549 55.2
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 1.9e-173 613.2 549 55.2
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 2.5e-173 612.8 543 58.0
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 2.5e-173 612.8 542 56.1
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 5.5e-173 611.7 543 54.5
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.1e-172 609.8 542 53.5
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 6.1e-172 608.2 543 54.9
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 6.7e-171 604.7 544 56.1
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 2.2e-169 599.7 539 54.7
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 3.8e-166 589.0 494 58.7
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 4.5e-159 565.5 592 49.5
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.6e-154 549.7 450 59.6
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 5.7e-154 548.5 559 52.6
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 2.2e-153 546.6 474 56.8
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.3e-150 537.3 462 53.9
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 2.2e-150 536.6 542 53.1
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 2.4e-144 516.5 545 48.1
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 2.3e-142 510.0 554 49.8
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 1.6e-140 503.8 472 53.6
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 2.8e-132 476.5 562 46.8
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.2e-130 471.1 558 46.2
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.6e-122 443.4 308 70.1
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 3.5e-119 433.0 403 53.6
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 1.9e-112 410.6 478 45.0
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.3e-92 344.7 559 35.8
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 6.0e-87 325.9 566 34.8
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 3.4e-82 310.1 577 35.0
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.0e-78 298.5 573 35.1
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.5e-77 294.7 566 35.0
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 9.6e-77 292.0 492 35.6
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 4.1e-75 286.6 222 61.7
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 3.4e-66 256.9 205 60.0
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 5.9e-58 229.6 183 63.4
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 9.7e-53 212.2 109 93.6
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 1.0e-49 202.2 258 41.5
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 1.5e-48 198.4 197 58.4
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 4.1e-27 127.1 75 77.3
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 3.8e-25 120.6 116 47.4
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 3.6e-23 114.0 131 47.3
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 1.8e-19 101.7 69 66.7
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 5.4e-19 100.1 100 58.0
Peaxi162Scf01662g00115 Petunia axillaris HOM05D006431 ORTHO05D007918 8.6e-09 66.2 176 29.5
CAN.G841.8 Capsicum annuum HOM05D006431 ORTHO05D007918 1.5e-08 65.5 176 29.0
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.4e-06 58.9 52 57.7
VMungo1383G3444 Vigna mungo HOM05D006431 ORTHO05D007918 1.8e-06 58.5 190 25.8
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 2.3e-06 58.2 56 48.2


User provided reference genes

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