Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p010900 Quercus lobata HOM05D003171 ORTHO05D000921 2.0e-92 342.4 171 100.0
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 5.5e-18 95.1 170 34.7
QL10p054458 Quercus lobata HOM05D003171 ORTHO05D000921 3.3e-15 85.9 170 33.5
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 4.3e-15 85.5 170 33.5
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 7.4e-15 84.7 172 33.7
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 1.3e-14 84.0 164 36.6
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 1.6e-14 83.6 162 38.3
Ca_02097_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 2.1e-14 83.2 172 34.3
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 2.2e-11 73.2 171 33.9
Ca_19984_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 6.5e-11 71.6 173 31.8
GSVIVG01021695001 Vitis vinifera HOM05D008473 ORTHO05D000921 6.5e-11 71.6 93 40.9
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.9e-10 70.1 171 35.7
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 5.5e-10 68.6 174 28.7
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 9.3e-10 67.8 169 33.1
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 1.2e-09 67.4 174 29.9
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 1.2e-09 67.4 174 29.9
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 1.6e-09 67.0 174 29.3
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 1.6e-09 67.0 171 27.5
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 2.1e-09 66.6 171 31.6
Medtr1g094760 Medicago truncatula HOM05D001243 ORTHO05D000843 2.7e-09 66.2 169 31.4
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 7.9e-09 64.7 158 31.0
COL.COLO4_13994 Corchorus olitorius HOM05D008473 ORTHO05D016003 1.0e-08 64.3 164 27.4
Atru.chr10.354 Acer truncatum HOM05D028950 ORTHO05D000921 1.8e-08 63.5 170 25.9
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 1.8e-08 63.5 171 28.7
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 3.9e-08 62.4 167 27.5
FAN26G2385 Fragaria x ananassa HOM05D003171 ORTHO05D000921 8.7e-08 61.2 170 23.5
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 1.1e-07 60.8 171 31.0
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 1.1e-07 60.8 171 31.0
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.5e-07 60.5 171 26.3
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 1.9e-07 60.1 118 32.2
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 1.9e-07 60.1 171 29.8
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 3.3e-07 59.3 118 31.4
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 3.3e-07 59.3 118 31.4
TPR.G10504 Trifolium pratense HOM05D000665 ORTHO05D000921 4.3e-07 58.9 50 48.0
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 5.7e-07 58.5 154 30.5
Dinv11570 Davidia involucrata HOM05D008473 ORTHO05D000921 7.4e-07 58.2 181 29.8
FAN23G0960 Fragaria x ananassa HOM05D003171 ORTHO05D000921 7.4e-07 58.2 170 25.9
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 7.4e-07 58.2 167 28.1
Ca_02052_v3 Cicer arietinum L. HOM05D008473 ORTHO05D000921 9.7e-07 57.8 92 34.8
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 9.7e-07 57.8 183 30.6
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 2.2e-06 56.6 77 36.4
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 2.2e-06 56.6 158 29.7
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.8e-06 56.2 166 25.9
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 4.8e-06 55.5 164 29.3
TPR.G9865 Trifolium pratense HOM05D003171 ORTHO05D000921 4.8e-06 55.5 86 34.9
MD03G1270400 Malus domestica HOM05D003171 ORTHO05D000921 6.3e-06 55.1 180 27.2
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 8.2e-06 54.7 170 25.3


User provided reference genes

Program Settings