Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p009638 Quercus lobata HOM05D004555 ORTHO05D005305 1.7e-123 446.0 226 100.0
QL02p009656 Quercus lobata HOM05D004555 ORTHO05D005305 5.7e-116 421.0 226 94.7
QL02p009623 Quercus lobata HOM05D004555 ORTHO05D005305 9.5e-111 403.7 226 90.3
QL02p009603 Quercus lobata HOM05D004555 ORTHO05D005305 2.5e-103 379.0 226 84.5
Dinv39456 Davidia involucrata HOM05D004555 ORTHO05D005305 7.3e-103 377.5 224 83.5
Actinidia29808 Actinidia chinensis HOM05D004555 ORTHO05D005305 1.8e-101 372.9 224 83.0
CiPaw.07G156800 Carya illinoinensis HOM05D004555 ORTHO05D005305 2.4e-98 362.5 224 78.6
MSTRG.1250 Avicennia marina HOM05D004555 ORTHO05D005305 1.7e-96 356.3 222 77.0
GSVIVG01009773001 Vitis vinifera HOM05D004555 ORTHO05D005305 3.9e-96 355.1 225 78.7
Rhsim07G0242900 Rhododendron simsii HOM05D004555 ORTHO05D005305 4.3e-95 351.7 225 78.2
Rhsim07G0242300 Rhododendron simsii HOM05D004555 ORTHO05D005305 9.5e-95 350.5 225 78.2
MD08G1024400 Malus domestica HOM05D004555 ORTHO05D005305 1.2e-94 350.1 226 75.2
CSS0029656 Camellia sinensis var. sinensis HOM05D004555 ORTHO05D005305 2.1e-94 349.4 224 79.0
Prupe.1G374200 Prunus persica HOM05D004555 ORTHO05D005305 2.8e-94 349.0 224 75.9
HanXRQChr09g0269571 Helianthus annuus HOM05D004555 ORTHO05D005305 3.6e-94 348.6 219 76.7
Actinidia29807 Actinidia chinensis HOM05D004555 ORTHO05D005305 1.8e-93 346.3 222 75.2
HanXRQChr16g0501461 Helianthus annuus HOM05D004555 ORTHO05D005305 2.3e-93 345.9 217 77.9
CAN.G847.6 Capsicum annuum HOM05D004555 ORTHO05D005305 3.1e-93 345.5 220 76.4
Ciclev10002388m.g Citrus clementina HOM05D004555 ORTHO05D005305 1.5e-92 343.2 226 73.0
FAN15G3036 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.5e-92 343.2 221 75.6
FAN26G3263 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.5e-92 343.2 221 75.6
Cfa013876 Carpinus fangiana HOM05D004555 ORTHO05D005305 2.6e-92 342.4 224 76.8
Sc02g0005680 Simmondsia chinensis HOM05D004555 ORTHO05D005305 4.4e-92 341.7 224 73.7
arahy.Tifrunner.gnm1.ann1.MX0J1Q Arachis hypogaea HOM05D004555 ORTHO05D005305 5.8e-92 341.3 225 72.9
Solyc04g080750.4 Solanum lycopersicum HOM05D004555 ORTHO05D005305 5.8e-92 341.3 225 72.0
FvH4_2g39310 Fragaria vesca HOM05D004555 ORTHO05D005305 7.6e-92 340.9 221 75.1
FAN27G1022 Fragaria x ananassa HOM05D004555 ORTHO05D005305 7.6e-92 340.9 221 75.1
Migut.C00768 Erythranthe guttata HOM05D004555 ORTHO05D005305 9.9e-92 340.5 222 72.5
SGA_v2.0_scaffold201G41359 Striga asiatica HOM05D004555 ORTHO05D005305 9.9e-92 340.5 222 73.9
Lsat_1_v5_gn_4_117401 Lactuca sativa HOM05D004555 ORTHO05D005305 1.3e-91 340.1 217 73.7
Lj5g0004312 Lotus japonicus HOM05D004555 ORTHO05D005305 1.3e-91 340.1 222 73.9
Solyc12g089230.2 Solanum lycopersicum HOM05D000012 ORTHO05D000567 2.9e-91 339.0 223 73.5
arahy.Tifrunner.gnm1.ann1.LAIT0P Arachis hypogaea HOM05D004555 ORTHO05D005305 4.9e-91 338.2 226 73.0
Peaxi162Scf00189g00812 Petunia axillaris HOM05D004555 ORTHO05D005305 4.9e-91 338.2 226 69.0
Sopen12g031110 Solanum pennellii HOM05D004555 ORTHO05D005305 6.4e-91 337.8 223 73.5
Glyma.17G253500 Glycine max HOM05D004555 ORTHO05D005305 8.3e-91 337.4 224 72.8
Glyma.14G071100 Glycine max HOM05D004555 ORTHO05D005305 1.1e-90 337.0 224 73.2
PGSC0003DMG400003702 Solanum tuberosum HOM05D004555 ORTHO05D005305 1.1e-90 337.0 225 71.1
Lalb_Chr22g0354561 Lupinus albus HOM05D004555 ORTHO05D005305 1.4e-90 336.7 220 73.2
Cfa013877 Carpinus fangiana HOM05D004555 ORTHO05D005305 1.9e-90 336.3 223 75.8
Lj4P789T31 Lonicera japonica HOM05D004555 ORTHO05D005305 2.4e-90 335.9 221 76.0
DCAR_022455 Daucus carota HOM05D004555 ORTHO05D005305 4.1e-90 335.1 222 71.6
Atru.chr13.408 Acer truncatum HOM05D004555 ORTHO05D005305 7.1e-90 334.3 224 73.7
RcHm_v2.0_Chr6g0301691 Rosa chinensis HOM05D004555 ORTHO05D005305 1.6e-89 333.2 218 73.4
Duzib093G2146 Durio zibethinus HOM05D004555 ORTHO05D005305 2.1e-89 332.8 220 72.7
EL10Ac1g00613 Beta vulgaris HOM05D004555 ORTHO05D005305 3.5e-89 332.0 226 72.6
PGSC0003DMG400015428 Solanum tuberosum HOM05D004555 ORTHO05D005305 3.5e-89 332.0 220 72.7
Thecc.08G033500 Theobroma cacao HOM05D004555 ORTHO05D005305 3.5e-89 332.0 226 72.6
Aqoxy5G01553 Aquilegia oxysepala HOM05D004555 ORTHO05D005305 1.7e-88 329.7 221 72.9
Potri.005G231600 Populus trichocarpa HOM05D004555 ORTHO05D005305 1.7e-88 329.7 222 71.2
Sabra02G0025300 Salix brachista HOM05D004555 ORTHO05D005305 1.7e-88 329.7 224 71.0
Eucgr.F01860 Eucalyptus grandis HOM05D004555 ORTHO05D005305 3.9e-88 328.6 225 72.9
Medtr1g022950 Medicago truncatula HOM05D004555 ORTHO05D005305 3.9e-88 328.6 222 71.6
Thecc.08G033700 Theobroma cacao HOM05D004555 ORTHO05D005305 5.1e-88 328.2 220 74.5
Peaxi162Scf00064g00530 Petunia axillaris HOM05D000012 ORTHO05D000567 6.6e-88 327.8 226 71.2
PSO724G1102 Papaver somniferum HOM05D004555 ORTHO05D005305 1.1e-87 327.0 223 71.3
CANSAT25G0954 Cannabis sativa HOM05D004555 ORTHO05D005305 1.9e-87 326.2 224 71.0
CsaV3_2G029030 Cucumis sativus L. HOM05D004555 ORTHO05D005305 3.3e-87 325.5 224 71.0
Gohir.D05G194000 Gossypium hirsutum HOM05D004555 ORTHO05D005305 4.3e-87 325.1 219 71.7
Gorai.009G199000 Gossypium raimondii HOM05D004555 ORTHO05D005305 4.3e-87 325.1 219 71.7
ClCG08G014730 Citrullus lanatus HOM05D004555 ORTHO05D005305 5.6e-87 324.7 223 70.0
Nn1g05806 Nelumbo nucifera HOM05D004555 ORTHO05D005305 5.6e-87 324.7 227 72.7
THA.LOC104812564 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 9.6e-87 323.9 222 71.2
Atru.chr13.407 Acer truncatum HOM05D004555 ORTHO05D005305 1.6e-86 323.2 225 71.6
Gohir.A05G190600 Gossypium hirsutum HOM05D004555 ORTHO05D005305 3.6e-86 322.0 219 70.8
ECA232G1060 Erigeron canadensis HOM05D004555 ORTHO05D005305 1.1e-85 320.5 200 76.5
COL.COLO4_26241 Corchorus olitorius HOM05D004555 ORTHO05D005305 2.4e-85 319.3 223 70.4
Phvul.001G011500 Phaseolus vulgaris HOM05D004555 ORTHO05D005305 3.1e-85 318.9 220 70.0
TPR.G30491 Trifolium pratense HOM05D004555 ORTHO05D005305 4.0e-85 318.5 222 68.5
THA.LOC104814152 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 5.2e-85 318.2 221 70.1
VMungo0647G2091 Vigna mungo HOM05D004555 ORTHO05D005305 8.9e-85 317.4 219 70.3
CANSAT25G2211 Cannabis sativa HOM05D004555 ORTHO05D005305 2.2e-83 312.8 222 68.0
Sed0025869 Sechium edule HOM05D004555 ORTHO05D005305 2.9e-83 312.4 223 67.3
Duzib116G0274 Durio zibethinus HOM05D004555 ORTHO05D005305 1.1e-82 310.5 203 75.9
PSO729G0189 Papaver somniferum HOM05D004555 ORTHO05D005305 2.4e-82 309.3 247 64.4
TWI56G1140 Tripterygium wilfordii HOM05D004555 ORTHO05D005305 2.4e-82 309.3 256 63.7
MBI16_g23832_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 7.1e-82 307.8 224 68.8
Sp1g29900 Schrenkiella parvula HOM05D004555 ORTHO05D005305 7.1e-82 307.8 217 67.3
Carub.0001s3280 Capsella rubella HOM05D004555 ORTHO05D005305 1.2e-81 307.0 217 67.3
AL1G49880 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 6.0e-81 304.7 217 66.4
Thhalv10001837m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 6.0e-81 304.7 217 66.8
vmacro04301 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.3e-80 302.8 215 72.6
vmacro22853 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.3e-80 302.8 215 72.6
AT1G35180 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 8.7e-80 300.8 217 65.9
Haze_22549 Corylus avellana HOM05D004555 ORTHO05D005305 8.7e-80 300.8 196 75.5
A05p23860 Brassica napus HOM05D004555 ORTHO05D005305 1.1e-79 300.4 217 65.4
BraA05t21262Z Brassica rapa HOM05D004555 ORTHO05D005305 1.1e-79 300.4 217 65.4
SalBow7G0356 Salvia bowleyana HOM05D004555 ORTHO05D005305 2.5e-79 299.3 281 58.0
BcaB03g13672 Brassica carinata HOM05D004555 ORTHO05D005305 4.3e-79 298.5 217 64.5
Nitab4.5_0007928g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 7.3e-79 297.7 250 60.4
BcaC05g27748 Brassica carinata HOM05D004555 ORTHO05D005305 9.6e-79 297.4 217 64.5
C05p37330 Brassica napus HOM05D004555 ORTHO05D005305 9.6e-79 297.4 217 64.5
Oeu030598.1 Olea europaea HOM05D004555 ORTHO05D005305 1.3e-78 297.0 223 70.0
Hund17186 Selenicereus undatus HOM05D004555 ORTHO05D005305 1.3e-78 297.0 225 66.2
BolC5t32477H Brassica oleracea HOM05D004555 ORTHO05D005305 2.8e-78 295.8 217 65.0
unitig_26.g9839 Utricularia gibba HOM05D004555 ORTHO05D005305 2.8e-78 295.8 223 65.9
Hund17243 Selenicereus undatus HOM05D004555 ORTHO05D005305 4.8e-78 295.0 225 64.4
AUR62014481 Chenopodium quinoa HOM05D004555 ORTHO05D005305 8.1e-78 294.3 227 63.4
Psat6g009720 Pisum sativum HOM05D004555 ORTHO05D005305 8.1e-78 294.3 192 72.4
CARHR288350 Cardamine hirsuta HOM05D004555 ORTHO05D005305 2.4e-77 292.7 222 63.5
COL.COLO4_26242 Corchorus olitorius HOM05D004555 ORTHO05D005305 9.0e-77 290.8 191 74.3
Sp1g33840 Schrenkiella parvula HOM05D004555 ORTHO05D005305 1.2e-76 290.4 216 61.6
Hma1.2p1_1194F.1_g265760 Hydrangea macrophylla HOM05D004555 ORTHO05D005305 1.5e-76 290.0 188 75.5
BraA02t08192Z Brassica rapa HOM05D004555 ORTHO05D005305 2.6e-76 289.3 217 62.2
Thhalv10011751m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 2.6e-76 289.3 216 61.1
BcaB04g17579 Brassica carinata HOM05D004555 ORTHO05D005305 4.4e-76 288.5 220 60.9
AL1G52650 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 5.8e-76 288.1 215 63.7
Nitab4.5_0000577g0020 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.7e-75 286.6 221 65.2
A02p31830 Brassica napus HOM05D004555 ORTHO05D005305 2.2e-75 286.2 217 61.3
A08p06280 Brassica napus HOM05D004555 ORTHO05D005305 8.4e-75 284.3 217 61.3
BraA08t32631Z Brassica rapa HOM05D004555 ORTHO05D005305 8.4e-75 284.3 217 61.3
AT1G45010 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 1.9e-74 283.1 215 62.8
Carub.0001s3550 Capsella rubella HOM05D004555 ORTHO05D005305 1.9e-74 283.1 213 63.4
Cpa.g.sc99.8 Carica papaya HOM05D004555 ORTHO05D005305 1.9e-74 283.1 217 67.7
BcaC07g37280 Brassica carinata HOM05D004555 ORTHO05D005305 2.4e-74 282.7 217 60.8
C08p07100 Brassica napus HOM05D004555 ORTHO05D005305 2.4e-74 282.7 217 60.8
BolC8t47554H Brassica oleracea HOM05D004555 ORTHO05D005305 2.4e-74 282.7 217 60.8
AT1G35170 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 7.9e-73 277.7 217 62.2
Cc10_g14070 Coffea canephora HOM05D004555 ORTHO05D005305 1.7e-72 276.6 220 63.6
Os01g0262500 Oryza sativa ssp. japonica HOM05D004555 ORTHO05D005305 1.7e-72 276.6 219 64.4
Manes.18G021200 Manihot esculenta HOM05D004555 ORTHO05D005305 1.1e-71 273.9 224 62.5
ATR1154G019 Amborella trichopoda HOM05D004555 ORTHO05D005305 1.3e-70 270.4 199 62.3
BcaC03g17015 Brassica carinata HOM05D004555 ORTHO05D005305 4.8e-70 268.5 222 58.6
BolC2t11011H Brassica oleracea HOM05D004555 ORTHO05D005305 4.8e-70 268.5 222 58.6
AUR62034520 Chenopodium quinoa HOM05D004555 ORTHO05D005305 8.4e-67 257.7 192 63.5
Nitab4.5_0001091g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.8e-64 250.0 226 58.4
CARHR036190 Cardamine hirsuta HOM05D004555 ORTHO05D005305 8.7e-64 247.7 188 60.6
SEGI_11700 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 3.3e-63 245.7 204 56.9
TPR.G17924 Trifolium pratense HOM05D004555 ORTHO05D005305 2.1e-62 243.0 160 69.4
Zm00001eb333330 Zea mays HOM05D004555 ORTHO05D005305 2.8e-62 242.7 208 56.7
MELO3C010969.2 Cucumis melo HOM05D004555 ORTHO05D005305 8.1e-62 241.1 160 71.2
Cc10_g02450 Coffea canephora HOM05D004555 ORTHO05D005305 5.3e-61 238.4 151 76.2
MBI16_g23833_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 3.8e-59 232.3 236 55.5
Sopen04g034340 Solanum pennellii HOM05D004555 ORTHO05D005305 3.8e-59 232.3 152 73.7
Aa31LG6G8640 Aethionema arabicum HOM05D004555 ORTHO05D005305 3.5e-57 225.7 173 63.0
C02p49220 Brassica napus HOM05D004555 ORTHO05D005305 1.0e-56 224.2 210 51.9
Nitab4.5_0001861g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.0e-56 224.2 224 51.8
Sed0024456 Sechium edule HOM05D004555 ORTHO05D005305 1.4e-53 213.8 176 60.2
AagrBONN_evm.TU.Sc2ySwM_369.584 Anthoceros agrestis HOM05D004555 ORTHO05D005305 2.4e-53 213.0 217 47.5
FAN20G2579 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.0e-51 207.6 220 51.8
SMO259G0011 Selaginella moellendorffii HOM05D004555 ORTHO05D005305 1.4e-50 203.8 216 48.6
Mapoly0020s0017 Marchantia polymorpha HOM05D004555 ORTHO05D005305 5.5e-50 201.8 215 45.1
SEGI_31948 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 4.3e-47 192.2 154 56.5
Lalb_Chr14g0369521 Lupinus albus HOM05D004555 ORTHO05D005305 3.8e-43 179.1 120 65.8
TPR.G29885 Trifolium pratense HOM05D004555 ORTHO05D005305 3.9e-40 169.1 120 64.2
CBR_g32335 Chara braunii HOM05D004555 ORTHO05D005305 2.5e-39 166.4 178 44.9
HanXRQChr09g0269541 Helianthus annuus HOM05D004555 ORTHO05D005305 9.7e-39 164.5 116 69.0
Nitab4.5_0007928g0040 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.4e-32 144.1 124 58.1
Haze_22557 Corylus avellana HOM05D004555 ORTHO05D005305 1.1e-31 141.0 90 77.8
Lalb_Chr14g0369531 Lupinus albus HOM05D004555 ORTHO05D005305 2.8e-30 136.3 86 79.1
Pp3c7_6700 Physcomitrium patens HOM05D004555 ORTHO05D005305 1.8e-29 133.7 147 42.2
vmacro04300 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 1.8e-24 117.1 150 48.7
vmacro22852 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 1.8e-24 117.1 150 48.7
MCO11G540 Micromonas commoda HOM05D004555 ORTHO05D005305 4.0e-24 115.9 209 31.6
QL02p009653 Quercus lobata HOM05D004555 ORTHO05D005305 5.2e-24 115.5 68 88.2
Cc11_g05350 Coffea canephora HOM05D004555 ORTHO05D005305 2.0e-23 113.6 73 72.6
PGR031G0233 Punica granatum HOM05D004555 ORTHO05D005305 2.9e-19 99.8 74 60.8
Hund17190 Selenicereus undatus HOM05D004555 ORTHO05D005305 2.0e-15 87.0 80 52.5
CARHR263530 Cardamine hirsuta HOM05D004555 ORTHO05D005305 4.4e-15 85.9 71 57.7
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 4.5e-12 75.9 47 68.1
HanXRQChr09g0269551 Helianthus annuus HOM05D004555 ORTHO05D005305 7.2e-10 68.6 59 61.0
arahy.Tifrunner.gnm1.ann1.5FL4AU Arachis hypogaea HOM05D000229 ORTHO05D005305 2.6e-07 60.1 38 68.4


User provided reference genes

Program Settings