Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 2.4e-212 741.9 363 100.0
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 6.3e-157 557.8 351 78.9
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 4.5e-155 551.6 366 75.4
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 6.1e-152 541.2 353 75.9
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 1.3e-130 470.3 356 66.6
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 2.1e-128 463.0 328 71.0
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 2.8e-128 462.6 358 66.5
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 3.6e-128 462.2 357 65.0
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 5.2e-127 458.4 357 65.3
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 2.0e-126 456.4 309 71.8
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 1.3e-125 453.8 357 64.4
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 3.7e-125 452.2 334 69.8
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 1.7e-122 443.4 357 63.9
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 3.9e-122 442.2 356 64.3
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 3.6e-120 435.6 359 61.3
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 2.3e-119 433.0 355 61.7
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 3.1e-119 432.6 359 61.8
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 1.2e-118 430.6 309 71.8
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 4.9e-117 425.2 314 67.8
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 6.4e-117 424.9 308 69.5
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 2.4e-116 422.9 361 60.7
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 1.6e-115 420.2 334 64.4
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 2.3e-114 416.4 313 66.8
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 3.0e-114 416.0 334 63.5
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 1.1e-113 414.1 342 62.9
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 2.1e-112 409.8 327 63.6
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 8.1e-112 407.9 295 68.8
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 1.8e-111 406.8 327 60.9
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 6.8e-111 404.8 323 63.2
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 1.5e-110 403.7 359 57.4
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 3.4e-110 402.5 355 59.4
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 5.8e-110 401.7 297 64.3
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 7.6e-110 401.4 355 58.0
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 4.9e-109 398.7 365 57.0
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 8.4e-109 397.9 344 58.4
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 1.4e-108 397.1 359 56.8
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 3.2e-108 396.0 324 62.0
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 5.4e-108 395.2 338 61.8
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 9.2e-108 394.4 308 62.3
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 1.2e-107 394.0 308 64.9
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 1.6e-107 393.7 358 56.7
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 6.0e-107 391.7 317 62.1
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 1.0e-106 391.0 334 58.7
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 2.3e-106 389.8 300 64.0
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 5.1e-106 388.7 273 70.3
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 8.7e-106 387.9 355 54.9
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 1.1e-105 387.5 353 56.4
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 1.5e-105 387.1 350 58.3
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 1.9e-105 386.7 338 60.4
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 5.6e-105 385.2 317 61.2
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 7.3e-105 384.8 297 65.0
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 3.6e-104 382.5 353 56.9
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 3.6e-104 382.5 323 59.8
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 4.7e-104 382.1 298 62.8
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 6.2e-104 381.7 296 62.8
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 1.4e-103 380.6 298 64.8
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 1.8e-103 380.2 313 60.7
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 6.9e-103 378.3 354 54.2
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 9.0e-103 377.9 372 54.0
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 9.0e-103 377.9 366 56.8
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 1.2e-102 377.5 354 54.5
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 2.6e-102 376.3 351 56.7
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 2.6e-102 376.3 276 69.2
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 9.9e-102 374.4 322 59.9
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 4.9e-101 372.1 350 55.7
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 8.4e-101 371.3 324 58.3
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 1.1e-100 370.9 338 59.8
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 2.4e-100 369.8 354 54.5
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 3.2e-100 369.4 352 55.1
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 3.2e-100 369.4 350 55.7
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 4.2e-100 369.0 333 56.5
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 7.8e-99 364.8 248 72.2
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 7.8e-99 364.8 357 54.6
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 3.0e-98 362.8 295 61.0
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 2.5e-97 359.8 310 59.0
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 2.5e-97 359.8 313 61.7
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 5.6e-97 358.6 350 54.6
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 4.8e-96 355.5 310 59.0
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 1.8e-95 353.6 376 51.9
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 6.9e-95 351.7 302 58.9
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 6.9e-95 351.7 300 60.0
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 1.5e-94 350.5 307 58.0
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 9.9e-94 347.8 318 56.3
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 1.3e-93 347.4 246 69.9
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 2.1e-91 340.1 290 62.1
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 6.0e-91 338.6 274 60.9
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 7.9e-91 338.2 309 55.3
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 3.0e-90 336.3 299 60.5
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 1.9e-89 333.6 337 51.0
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 6.9e-87 325.1 278 56.5
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 1.7e-85 320.5 238 68.9
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 4.6e-83 312.4 425 44.7
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 3.0e-82 309.7 305 52.8
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 7.4e-81 305.1 341 45.7
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 1.6e-75 287.3 303 49.5
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 4.8e-72 275.8 304 53.0
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 1.0e-69 268.1 190 69.5
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 7.2e-60 235.3 357 41.5
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 1.2e-59 234.6 217 54.8
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 4.7e-59 232.6 312 42.9
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 6.1e-59 232.3 277 48.4
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 8.5e-53 211.8 316 39.9
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 4.2e-52 209.5 298 40.6
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 1.8e-47 194.1 253 45.5
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 5.9e-46 189.1 164 59.1
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 1.0e-42 178.3 391 32.0
Actinidia22515 Actinidia chinensis HOM05D007079 ORTHO05D009006 8.5e-37 158.7 189 45.0
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 7.0e-31 139.0 232 38.4
FAN20G1265 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.6e-27 127.9 130 52.3
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 2.8e-27 127.1 326 32.8
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 3.0e-26 123.6 108 57.4
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 1.1e-23 115.2 106 52.8
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 5.9e-22 109.4 129 47.3
CSS0043977 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 2.1e-19 100.9 105 48.6
COL.COLO4_19820 Corchorus olitorius HOM05D001041 ORTHO05D000846 8.9e-10 68.9 55 65.5
CSS0014268 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 9.2e-07 58.9 103 33.0


User provided reference genes

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