Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 3.1e-75 285.0 144 100.0
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 1.5e-40 169.9 144 65.3
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 1.2e-37 160.2 139 65.5
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 5.8e-37 157.9 147 57.1
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 4.9e-36 154.8 146 55.5
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 1.6e-34 149.8 147 53.1
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 5.1e-33 144.8 121 66.1
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 5.1e-33 144.8 143 55.2
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 8.6e-33 144.1 147 55.8
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 1.9e-32 142.9 145 53.1
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 2.5e-32 142.5 139 55.4
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 2.5e-32 142.5 142 56.3
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 4.3e-32 141.7 146 52.7
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 4.3e-32 141.7 146 52.7
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 5.6e-32 141.4 146 52.7
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 7.3e-32 141.0 146 50.7
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 7.3e-32 141.0 146 50.7
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 9.5e-32 140.6 146 51.4
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 1.2e-31 140.2 144 54.2
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 1.2e-31 140.2 150 52.7
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 2.1e-31 139.4 150 54.7
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 4.7e-31 138.3 151 55.0
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 1.1e-30 137.1 149 52.3
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 1.4e-30 136.7 152 50.0
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 3.1e-30 135.6 150 50.7
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 8.9e-30 134.0 146 52.7
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 1.2e-29 133.7 145 52.4
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 2.0e-29 132.9 146 50.7
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 2.6e-29 132.5 145 55.2
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 3.4e-29 132.1 137 53.3
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 4.4e-29 131.7 156 53.2
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 5.8e-29 131.3 117 56.4
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 4.9e-28 128.3 147 51.0
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 8.4e-28 127.5 135 52.6
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 1.1e-27 127.1 141 55.3
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 1.4e-27 126.7 146 48.6
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 1.4e-27 126.7 137 50.4
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 3.2e-27 125.6 136 50.7
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 4.1e-27 125.2 147 50.3
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 5.4e-27 124.8 139 48.9
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 7.1e-27 124.4 148 48.6
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 2.1e-26 122.9 146 46.6
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.1e-26 122.9 148 52.0
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 3.5e-26 122.1 148 47.3
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 4.6e-26 121.7 142 50.7
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 6.0e-26 121.3 148 51.4
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 1.0e-25 120.6 146 47.3
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 1.3e-25 120.2 143 49.7
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 2.3e-25 119.4 148 51.4
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 3.9e-25 118.6 157 47.8
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 3.9e-25 118.6 145 49.7
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 5.1e-25 118.2 159 44.0
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 6.6e-25 117.9 139 48.9
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 8.7e-25 117.5 142 49.3
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 8.7e-25 117.5 144 46.5
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 8.7e-25 117.5 145 49.0
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 1.9e-24 116.3 146 48.6
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 2.5e-24 115.9 140 51.4
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 2.5e-24 115.9 147 48.3
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 3.3e-24 115.5 146 48.6
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 9.6e-24 114.0 140 49.3
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 1.6e-23 113.2 146 45.2
Eucgr.F01583 Eucalyptus grandis HOM05D004108 ORTHO05D004849 2.8e-23 112.5 163 42.3
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 3.6e-23 112.1 139 48.2
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 8.1e-23 110.9 145 48.3
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 1.1e-22 110.5 160 46.2
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 1.1e-22 110.5 139 47.5
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.4e-22 110.2 148 44.6
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 1.4e-22 110.2 142 47.2
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 3.1e-22 109.0 143 45.5
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 3.1e-22 109.0 146 45.9
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 9.0e-22 107.5 163 44.8
MBI10_g18267_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 1.2e-21 107.1 143 46.2
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 1.2e-21 107.1 138 47.1
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 1.2e-21 107.1 148 46.6
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 2.0e-21 106.3 132 46.2
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 2.6e-21 105.9 137 51.1
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 3.4e-21 105.5 145 40.7
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 3.4e-21 105.5 145 40.7
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 4.4e-21 105.1 140 45.0
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 5.8e-21 104.8 166 44.0
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 7.6e-21 104.4 140 44.3
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 9.9e-21 104.0 144 45.1
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 9.9e-21 104.0 148 44.6
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 1.3e-20 103.6 148 43.9
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 1.3e-20 103.6 150 44.0
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 2.2e-20 102.8 145 43.4
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 2.2e-20 102.8 145 43.4
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 2.2e-20 102.8 126 46.8
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 2.2e-20 102.8 156 44.9
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 3.8e-20 102.1 147 46.9
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 3.8e-20 102.1 149 45.0
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 3.8e-20 102.1 166 44.0
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 6.4e-20 101.3 117 47.9
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 8.4e-20 100.9 166 43.4
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 1.1e-19 100.5 135 45.2
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 1.4e-19 100.1 149 43.6
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 7.1e-19 97.8 136 42.6
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 7.1e-19 97.8 138 42.8
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 9.3e-19 97.4 137 43.8
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 1.2e-18 97.1 146 42.5
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.2e-18 97.1 148 43.2
Rhsim06G0031500 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.3e-17 93.6 116 49.1
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 5.1e-17 91.7 137 42.3
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 6.6e-17 91.3 150 44.0
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 1.1e-16 90.5 131 45.8
Dinv36099 Davidia involucrata HOM05D004108 ORTHO05D004849 1.1e-16 90.5 117 47.0
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 1.9e-16 89.7 139 40.3
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea HOM05D004108 ORTHO05D004849 3.3e-16 89.0 137 41.6
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 4.3e-16 88.6 131 43.5
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 4.3e-16 88.6 134 42.5
Aqoxy3G01079 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 9.6e-16 87.4 137 41.6
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 1.3e-15 87.0 131 42.0
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 1.6e-15 86.7 154 40.9
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 1.6e-15 86.7 142 41.5
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 2.8e-15 85.9 137 40.9
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 4.8e-15 85.1 131 42.0
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 4.8e-15 85.1 131 42.0
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 4.8e-15 85.1 131 42.0
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 4.8e-15 85.1 131 42.0
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 6.2e-15 84.7 131 42.0
Nn2g14293 Nelumbo nucifera HOM05D004108 ORTHO05D004849 6.2e-15 84.7 114 44.7
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 8.1e-15 84.3 130 43.8
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 1.4e-14 83.6 131 41.2
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 1.4e-14 83.6 134 42.5
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 6.9e-14 81.3 137 40.9
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 1.2e-13 80.5 130 43.8
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 1.5e-13 80.1 131 38.9
Nitab4.5_0001759g0080 Nicotiana tabacum HOM05D004108 ORTHO05D004849 1.5e-13 80.1 102 47.1
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 4.5e-13 78.6 131 41.2
CDE11G1036 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 4.5e-13 78.6 145 39.3
Aqoxy3G01077 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 5.8e-13 78.2 131 39.7
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 5.8e-13 78.2 130 37.7
Phvul.009G058800 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 5.8e-13 78.2 142 40.1
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 7.6e-13 77.8 136 38.2
CDE05G3574 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.3e-12 77.0 145 38.6
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 1.7e-12 76.6 149 38.3
Actinidia30825 Actinidia chinensis HOM05D004108 ORTHO05D004849 2.2e-12 76.3 95 53.7
ClCG05G018840 Citrullus lanatus HOM05D004108 ORTHO05D004849 6.4e-12 74.7 104 44.2
HanXRQChr16g0501561 Helianthus annuus HOM05D004108 ORTHO05D004849 2.4e-11 72.8 130 40.8
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 4.2e-11 72.0 131 40.5
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 5.4e-11 71.6 132 34.1
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 7.1e-11 71.2 140 35.7
SEGI_15325 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 7.1e-11 71.2 158 34.2
SEGI_30411 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 7.1e-11 71.2 151 37.1
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.1e-10 69.7 144 32.6
Actinidia38001 Actinidia chinensis HOM05D004108 ORTHO05D004849 2.7e-10 69.3 101 39.6
Mapoly0037s0069 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.6e-10 68.6 140 36.4
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.6e-10 68.6 143 34.3
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 4.6e-10 68.6 132 39.4
arahy.Tifrunner.gnm1.ann1.KZM1SZ Arachis hypogaea HOM05D004108 ORTHO05D004849 2.3e-09 66.2 102 43.1
arahy.Tifrunner.gnm1.ann1.RL39CN Arachis hypogaea HOM05D004108 ORTHO05D004849 2.3e-09 66.2 102 43.1
Mapoly0152s0035 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.3e-09 66.2 145 33.8
Glyma.18G124300 Glycine max HOM05D004108 ORTHO05D004849 3.0e-09 65.9 109 40.4
Sc02g0005700 Simmondsia chinensis HOM05D004108 ORTHO05D004849 3.9e-09 65.5 77 53.2
Peaxi162Scf00303g00058 Petunia axillaris HOM05D004108 ORTHO05D004849 1.5e-08 63.5 107 40.2
AUR62014477 Chenopodium quinoa HOM05D004108 ORTHO05D004849 1.6e-07 60.1 45 64.4
Mapoly0087s0045 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.6e-07 60.1 144 31.2
CSS0033768 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 2.8e-07 59.3 45 60.0
Mapoly0087s0044 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.8e-07 58.5 144 29.9
Nitab4.5_0004768g0030 Nicotiana tabacum HOM05D004108 ORTHO05D004849 4.8e-07 58.5 103 40.8
Peaxi162Scf00020g01711 Petunia axillaris HOM05D004108 ORTHO05D004849 8.1e-07 57.8 95 42.1
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.1e-06 57.4 136 30.1
SMO348G0043 Selaginella moellendorffii HOM05D004108 ORTHO05D004849 2.4e-06 56.2 153 33.3
Actinidia29817 Actinidia chinensis HOM05D004108 ORTHO05D004849 5.3e-06 55.1 40 60.0
Pp3c20_22930 Physcomitrium patens HOM05D004108 ORTHO05D004849 5.3e-06 55.1 128 32.0
PGSC0003DMG400005376 Solanum tuberosum HOM05D004108 ORTHO05D004849 5.3e-06 55.1 54 53.7


User provided reference genes

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