Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p008889 Quercus lobata HOM05D004055 ORTHO05D337819 2.4e-120 435.6 236 100.0
Phvul.009G146900 Phaseolus vulgaris HOM05D004055 ORTHO05D004795 5.1e-14 82.4 208 35.6
arahy.Tifrunner.gnm1.ann1.GWIQ86 Arachis hypogaea HOM05D004055 ORTHO05D004795 1.9e-13 80.5 176 35.8
Glyma.08G146000 Glycine max HOM05D004055 ORTHO05D004795 1.9e-13 80.5 175 38.9
RcHm_v2.0_Chr2g0119271 Rosa chinensis HOM05D004055 ORTHO05D004795 9.5e-13 78.2 200 34.5
VMungo1309G1914 Vigna mungo HOM05D004055 ORTHO05D004795 1.6e-12 77.4 277 30.7
VMungo0251G0876 Vigna mungo HOM05D004055 ORTHO05D004795 2.1e-12 77.0 257 28.4
Glyma.06G149200 Glycine max HOM05D004055 ORTHO05D004795 4.7e-12 75.9 280 30.4
Glyma.05G187800 Glycine max HOM05D004055 ORTHO05D004795 6.2e-12 75.5 175 36.6
Lj4g0015873 Lotus japonicus HOM05D004055 ORTHO05D004795 6.2e-12 75.5 182 35.2
Potri.001G307600 Populus trichocarpa HOM05D004055 ORTHO05D004795 1.1e-11 74.7 211 30.8
MD15G1319400 Malus domestica HOM05D004055 ORTHO05D004795 4.0e-11 72.8 190 33.7
Medtr3g095380 Medicago truncatula HOM05D004055 ORTHO05D004795 4.0e-11 72.8 210 28.6
TPR.G18732 Trifolium pratense HOM05D004055 ORTHO05D004795 4.0e-11 72.8 201 31.3
GSVIVG01034541001 Vitis vinifera HOM05D004055 ORTHO05D004795 4.0e-11 72.8 263 28.9
FAN26G2960 Fragaria x ananassa HOM05D004055 ORTHO05D004795 5.2e-11 72.4 200 33.0
arahy.Tifrunner.gnm1.ann1.WFL6TQ Arachis hypogaea HOM05D004055 ORTHO05D004795 6.8e-11 72.0 253 29.6
Peaxi162Scf00599g00035 Petunia axillaris HOM05D004055 ORTHO05D004795 6.8e-11 72.0 178 32.6
Glyma.04G216700 Glycine max HOM05D004055 ORTHO05D004795 8.9e-11 71.6 275 30.5
Duzib114G0672 Durio zibethinus HOM05D004055 ORTHO05D004795 1.2e-10 71.2 197 31.5
FAN28G2172 Fragaria x ananassa HOM05D004055 ORTHO05D004795 1.2e-10 71.2 197 31.5
Lj1g0026829 Lotus japonicus HOM05D004055 ORTHO05D004795 1.2e-10 71.2 201 29.9
TWI79G0735 Tripterygium wilfordii HOM05D004055 ORTHO05D004795 1.2e-10 71.2 194 34.0
Dinv14354 Davidia involucrata HOM05D004055 ORTHO05D004795 1.5e-10 70.9 200 33.0
Phvul.002G268700 Phaseolus vulgaris HOM05D004055 ORTHO05D004795 1.5e-10 70.9 254 29.1
Prupe.6G180300 Prunus persica HOM05D004055 ORTHO05D004795 2.0e-10 70.5 255 29.0
PSO541G1884 Papaver somniferum HOM05D004055 ORTHO05D004795 5.8e-10 68.9 211 31.8
Lalb_Chr12g0203361 Lupinus albus HOM05D004055 ORTHO05D004795 7.6e-10 68.6 246 28.9
Sabra19G0004100 Salix brachista HOM05D004055 ORTHO05D004795 7.6e-10 68.6 205 29.8
Duzib114G0632 Durio zibethinus HOM05D004055 ORTHO05D004795 9.9e-10 68.2 197 31.0
Sabra19G0021600 Salix brachista HOM05D004055 ORTHO05D004795 9.9e-10 68.2 212 29.7
PGSC0003DMG400024089 Solanum tuberosum HOM05D004055 ORTHO05D004795 9.9e-10 68.2 178 32.6
CiPaw.04G087200 Carya illinoinensis HOM05D004055 ORTHO05D004795 1.3e-09 67.8 269 27.9
Lsat_1_v5_gn_5_40301 Lactuca sativa HOM05D004055 ORTHO05D004795 1.3e-09 67.8 203 30.5
CAN.G869.1 Capsicum annuum HOM05D004055 ORTHO05D004795 1.7e-09 67.4 183 30.6
CiPaw.03G129400 Carya illinoinensis HOM05D004055 ORTHO05D004795 1.7e-09 67.4 285 28.4
Actinidia09813 Actinidia chinensis HOM05D004055 ORTHO05D004795 2.2e-09 67.0 206 32.0
Duzib264G0984 Durio zibethinus HOM05D004055 ORTHO05D004795 2.2e-09 67.0 202 29.7
arahy.Tifrunner.gnm1.ann1.F10EXU Arachis hypogaea HOM05D004055 ORTHO05D004795 2.9e-09 66.6 224 31.2
DCAR_001415 Daucus carota HOM05D004055 ORTHO05D004795 2.9e-09 66.6 196 31.1
FvH4_1g23670 Fragaria vesca HOM05D004055 ORTHO05D004795 2.9e-09 66.6 203 33.0
Gohir.A06G175700 Gossypium hirsutum HOM05D004055 ORTHO05D004795 2.9e-09 66.6 271 28.4
Manes.13G082000 Manihot esculenta HOM05D004055 ORTHO05D004795 2.9e-09 66.6 216 29.6
Oeu011950.2 Olea europaea HOM05D004055 ORTHO05D004795 2.9e-09 66.6 183 28.4
Sed0016858 Sechium edule HOM05D004055 ORTHO05D004795 2.9e-09 66.6 206 30.1
TWI31G0449 Tripterygium wilfordii HOM05D004055 ORTHO05D004795 2.9e-09 66.6 264 28.4
Atru.chr4.588 Acer truncatum HOM05D004055 ORTHO05D004795 3.7e-09 66.2 270 29.3
FAN19G0550 Fragaria x ananassa HOM05D004055 ORTHO05D004795 3.7e-09 66.2 204 33.3
FAN23G0659 Fragaria x ananassa HOM05D004055 ORTHO05D004795 3.7e-09 66.2 203 33.0
ClCG01G015720 Citrullus lanatus HOM05D004055 ORTHO05D004795 4.9e-09 65.9 200 30.0
MD01G1024900 Malus domestica HOM05D004055 ORTHO05D004795 4.9e-09 65.9 261 27.6
GSVIVG01026619001 Vitis vinifera HOM05D004055 ORTHO05D004795 4.9e-09 65.9 191 29.3
CSS0019507 Camellia sinensis var. sinensis HOM05D004055 ORTHO05D004795 6.4e-09 65.5 226 31.0
Gorai.010G216800 Gossypium raimondii HOM05D004055 ORTHO05D004795 6.4e-09 65.5 271 27.3
COL.COLO4_21459 Corchorus olitorius HOM05D004055 ORTHO05D004795 8.4e-09 65.1 271 28.0
QL06p030904 Quercus lobata HOM05D004055 ORTHO05D004795 8.4e-09 65.1 283 28.6
Sabra16G0193500 Salix brachista HOM05D004055 ORTHO05D004795 8.4e-09 65.1 282 27.0
COL.COLO4_35774 Corchorus olitorius HOM05D004055 ORTHO05D004795 1.1e-08 64.7 195 28.7
Dinv15094 Davidia involucrata HOM05D004055 ORTHO05D004795 1.4e-08 64.3 222 29.3
Duzib128G0998 Durio zibethinus HOM05D004055 ORTHO05D004795 1.4e-08 64.3 270 27.8
THA.LOC104818468 Tarenaya hassleriana HOM05D004055 ORTHO05D004795 1.4e-08 64.3 193 32.6
MBI17_g17030_MAGBIO Magnolia biondii HOM05D004055 ORTHO05D004795 1.9e-08 63.9 284 28.9
PSO675G8047 Papaver somniferum HOM05D004055 ORTHO05D004795 1.9e-08 63.9 212 30.2
Potri.019G003900 Populus trichocarpa HOM05D004055 ORTHO05D004795 1.9e-08 63.9 279 28.0
Lsat_1_v5_gn_4_139020 Lactuca sativa HOM05D004055 ORTHO05D004795 2.4e-08 63.5 199 30.2
Sc16g0004020 Simmondsia chinensis HOM05D004055 ORTHO05D004795 2.4e-08 63.5 261 28.4
Solyc04g071520.3 Solanum lycopersicum HOM05D004055 ORTHO05D004795 2.4e-08 63.5 185 31.4
arahy.Tifrunner.gnm1.ann1.W5F641 Arachis hypogaea HOM05D004055 ORTHO05D004795 3.2e-08 63.2 226 29.6
Nitab4.5_0001582g0050 Nicotiana tabacum HOM05D004055 ORTHO05D004795 3.2e-08 63.2 204 29.9
Nitab4.5_0004021g0040 Nicotiana tabacum HOM05D004055 ORTHO05D004795 3.2e-08 63.2 204 29.4
Gohir.D06G185400 Gossypium hirsutum HOM05D004055 ORTHO05D004795 4.1e-08 62.8 271 26.6
Eucgr.I00261 Eucalyptus grandis HOM05D004055 ORTHO05D004795 7.1e-08 62.0 277 29.6
Lalb_Chr08g0238691 Lupinus albus HOM05D004055 ORTHO05D004795 7.1e-08 62.0 213 29.1
Sopen04g027490 Solanum pennellii HOM05D004055 ORTHO05D004795 7.1e-08 62.0 184 31.0
THA.LOC104799385 Tarenaya hassleriana HOM05D004055 ORTHO05D004795 7.1e-08 62.0 201 30.3
Aqoxy6G00380 Aquilegia oxysepala HOM05D004055 ORTHO05D004795 9.2e-08 61.6 208 28.4
Ciclev10025964m.g Citrus clementina HOM05D004055 ORTHO05D004795 9.2e-08 61.6 277 27.4
Thecc.10G166300 Theobroma cacao HOM05D004055 ORTHO05D004795 9.2e-08 61.6 272 26.8
CsaV3_6G042000 Cucumis sativus L. HOM05D004055 ORTHO05D004795 1.2e-07 61.2 270 25.9
Manes.12G149500 Manihot esculenta HOM05D004055 ORTHO05D004795 1.2e-07 61.2 278 25.2
C03p04740 Brassica napus HOM05D004055 ORTHO05D004795 2.1e-07 60.5 279 26.2
BolC3t13008H Brassica oleracea HOM05D004055 ORTHO05D004795 2.1e-07 60.5 279 26.2
PGR119G1730 Punica granatum HOM05D004055 ORTHO05D004795 2.1e-07 60.5 282 27.7
Sed0022459 Sechium edule HOM05D004055 ORTHO05D004795 2.1e-07 60.5 276 27.2
Nn5g27192 Nelumbo nucifera HOM05D004055 ORTHO05D004795 2.7e-07 60.1 286 26.2
Gohir.D04G014600 Gossypium hirsutum HOM05D004055 ORTHO05D004795 3.5e-07 59.7 274 27.0
Gorai.012G017100 Gossypium raimondii HOM05D004055 ORTHO05D004795 3.5e-07 59.7 274 27.0
Gohir.A05G401200 Gossypium hirsutum HOM05D004055 ORTHO05D004795 4.6e-07 59.3 274 26.6
SGA_v2.0_scaffold48G18001 Striga asiatica HOM05D004055 ORTHO05D004795 4.6e-07 59.3 199 28.6
BcaB08g37176 Brassica carinata HOM05D004055 ORTHO05D004795 6.0e-07 58.9 205 29.3
Thecc.01G135000 Theobroma cacao HOM05D004055 ORTHO05D004795 6.0e-07 58.9 284 27.1
HanXRQChr09g0259611 Helianthus annuus HOM05D004055 ORTHO05D004795 7.8e-07 58.5 206 28.6
Lalb_Chr23g0272481 Lupinus albus HOM05D004055 ORTHO05D004795 7.8e-07 58.5 207 29.5
MELO3C008024.2 Cucumis melo HOM05D004055 ORTHO05D004795 1.0e-06 58.2 268 26.5
Nitab4.5_0023764g0010 Nicotiana tabacum HOM05D004055 ORTHO05D004795 1.0e-06 58.2 175 30.3
Hund03496 Selenicereus undatus HOM05D004055 ORTHO05D004795 1.0e-06 58.2 229 27.9
TAR625G1530 Trochodendron aralioides HOM05D004055 ORTHO05D004795 1.0e-06 58.2 203 29.1
Hma1.2p1_0282F.1_g113380 Hydrangea macrophylla HOM05D004055 ORTHO05D004795 2.3e-06 57.0 223 26.9
CANSAT01G3086 Cannabis sativa HOM05D004055 ORTHO05D004795 3.0e-06 56.6 293 26.3
Lj4A857G22 Lonicera japonica HOM05D004055 ORTHO05D004795 3.0e-06 56.6 179 31.8
TAR381G1437 Trochodendron aralioides HOM05D004055 ORTHO05D004795 6.6e-06 55.5 295 26.8
Solyc11g005450.3 Solanum lycopersicum HOM05D004055 ORTHO05D004795 8.6e-06 55.1 198 28.8


User provided reference genes

Program Settings