Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p008420 Quercus lobata HOM05D006523 ORTHO05D008212 5.3e-57 224.2 116 100.0
QL08p059471 Quercus lobata HOM05D006523 ORTHO05D008212 1.0e-52 209.9 116 93.1
Cc02_g07640 Coffea canephora HOM05D006523 ORTHO05D008212 7.2e-38 160.6 111 72.1
TAR633G0385 Trochodendron aralioides HOM05D006523 ORTHO05D008212 9.4e-38 160.2 112 72.3
Haze_17085 Corylus avellana HOM05D006523 ORTHO05D008212 1.2e-37 159.8 116 75.0
Dinv03705 Davidia involucrata HOM05D006523 ORTHO05D008212 1.2e-37 159.8 112 74.1
Dinv15863 Davidia involucrata HOM05D006523 ORTHO05D008212 1.2e-37 159.8 112 74.1
CSS0042327 Camellia sinensis var. sinensis HOM05D006523 ORTHO05D008212 2.7e-37 158.7 111 73.0
CiPaw.01G289000 Carya illinoinensis HOM05D006523 ORTHO05D008212 1.4e-36 156.4 116 72.4
Nn8g38773 Nelumbo nucifera HOM05D006523 ORTHO05D008212 1.8e-36 156.0 111 73.0
Potri.010G202200 Populus trichocarpa HOM05D006523 ORTHO05D008212 8.8e-36 153.7 111 72.1
Nitab4.5_0001040g0050 Nicotiana tabacum HOM05D006523 ORTHO05D008212 1.1e-35 153.3 111 72.1
SalBow6G0031 Salvia bowleyana HOM05D006523 ORTHO05D008212 1.5e-35 152.9 112 74.1
TWI15G0822 Tripterygium wilfordii HOM05D006523 ORTHO05D008212 4.4e-35 151.4 111 69.4
COL.COLO4_15080 Corchorus olitorius HOM05D006523 ORTHO05D008212 7.4e-35 150.6 112 73.2
Cpa.g.sc1.423 Carica papaya HOM05D006523 ORTHO05D008212 9.7e-35 150.2 112 72.3
THA.LOC104826739 Tarenaya hassleriana HOM05D006523 ORTHO05D008212 1.3e-34 149.8 117 69.2
Thecc.10G036400 Theobroma cacao HOM05D006523 ORTHO05D008212 1.3e-34 149.8 112 75.0
GSVIVG01016519001 Vitis vinifera HOM05D006523 ORTHO05D008212 2.2e-34 149.1 112 68.8
Ah.16g102450 Amaranthus hybridus HOM05D006523 ORTHO05D008212 3.7e-34 148.3 112 67.9
EL10Ac2g04730 Beta vulgaris HOM05D006523 ORTHO05D008212 3.7e-34 148.3 112 67.9
Lj1C939G12 Lonicera japonica HOM05D006523 ORTHO05D008212 4.8e-34 147.9 114 70.2
MSTRG.278 Avicennia marina HOM05D006523 ORTHO05D008212 6.3e-34 147.5 112 68.8
MBI14_g12127_MAGBIO Magnolia biondii HOM05D006523 ORTHO05D008212 8.2e-34 147.1 112 71.4
MD07G1200600 Malus domestica HOM05D006523 ORTHO05D008212 8.2e-34 147.1 112 67.9
Peaxi162Scf00658g00085 Petunia axillaris HOM05D006523 ORTHO05D008212 8.2e-34 147.1 111 70.3
Ca_05884_v3 Cicer arietinum L. HOM05D006523 ORTHO05D008212 1.4e-33 146.4 113 70.8
RcHm_v2.0_Chr1g0367871 Rosa chinensis HOM05D006523 ORTHO05D008212 1.4e-33 146.4 116 66.4
ECA238G1917 Erigeron canadensis HOM05D006523 ORTHO05D008212 1.8e-33 146.0 113 68.1
FvH4_7g22770 Fragaria vesca HOM05D006523 ORTHO05D008212 1.8e-33 146.0 116 68.1
FAN06G3404 Fragaria x ananassa HOM05D006523 ORTHO05D008212 1.8e-33 146.0 116 68.1
Prupe.2G237400 Prunus persica HOM05D006523 ORTHO05D008212 1.8e-33 146.0 112 68.8
TPR.G3462 Trifolium pratense HOM05D006523 ORTHO05D008212 2.4e-33 145.6 114 71.1
CANSAT56G2206 Cannabis sativa HOM05D006523 ORTHO05D008212 3.1e-33 145.2 112 67.0
CANSAT56G0033 Cannabis sativa HOM05D006523 ORTHO05D008212 4.1e-33 144.8 116 64.7
Gorai.012G071600 Gossypium raimondii HOM05D006523 ORTHO05D008212 5.3e-33 144.4 112 71.4
LjContig00141g0009707 Lotus japonicus HOM05D006523 ORTHO05D008212 5.3e-33 144.4 116 65.5
Manes.10G029100 Manihot esculenta HOM05D006523 ORTHO05D008212 5.3e-33 144.4 112 66.1
Aqoxy1G00906 Aquilegia oxysepala HOM05D006523 ORTHO05D008212 7.0e-33 144.1 112 66.1
FAN01G0003 Fragaria x ananassa HOM05D006523 ORTHO05D008212 7.0e-33 144.1 116 67.2
FAN01G0853 Fragaria x ananassa HOM05D006523 ORTHO05D008212 7.0e-33 144.1 116 67.2
Gohir.D04G064000 Gossypium hirsutum HOM05D006523 ORTHO05D008212 7.0e-33 144.1 112 71.4
Sabra10G0156100 Salix brachista HOM05D006523 ORTHO05D008212 7.0e-33 144.1 143 56.6
SGA_v2.0_scaffold221G42676 Striga asiatica HOM05D006523 ORTHO05D008212 7.0e-33 144.1 121 66.9
ClCG09G019630 Citrullus lanatus HOM05D006523 ORTHO05D008212 9.1e-33 143.7 113 69.0
Duzib114G1044 Durio zibethinus HOM05D006523 ORTHO05D008212 9.1e-33 143.7 112 71.4
Aa31sc24G140 Aethionema arabicum HOM05D006523 ORTHO05D008212 1.2e-32 143.3 112 67.0
CsaV3_5G026760 Cucumis sativus L. HOM05D006523 ORTHO05D008212 2.0e-32 142.5 117 67.5
FAN10G0859 Fragaria x ananassa HOM05D006523 ORTHO05D008212 3.5e-32 141.7 116 65.5
Nitab4.5_0001655g0150 Nicotiana tabacum HOM05D006523 ORTHO05D008212 3.5e-32 141.7 112 69.6
FAN03G0736 Fragaria x ananassa HOM05D006523 ORTHO05D008212 4.5e-32 141.4 116 65.5
PSO513G0162 Papaver somniferum HOM05D006523 ORTHO05D008212 5.9e-32 141.0 111 68.5
Eucgr.G02942 Eucalyptus grandis HOM05D006523 ORTHO05D008212 7.7e-32 140.6 111 64.0
Carub.0006s1202 Capsella rubella HOM05D006523 ORTHO05D008212 1.0e-31 140.2 113 67.3
Actinidia23669 Actinidia chinensis HOM05D006523 ORTHO05D008212 1.7e-31 139.4 111 67.6
Medtr5g080020 Medicago truncatula HOM05D006523 ORTHO05D008212 1.7e-31 139.4 115 67.0
Sp6g30170 Schrenkiella parvula HOM05D006523 ORTHO05D008212 1.7e-31 139.4 113 66.4
AUR62039361 Chenopodium quinoa HOM05D006523 ORTHO05D008212 2.2e-31 139.0 112 66.1
PGR142G0925 Punica granatum HOM05D006523 ORTHO05D008212 2.2e-31 139.0 113 65.5
Gohir.A05G348500 Gossypium hirsutum HOM05D006523 ORTHO05D008212 2.9e-31 138.7 112 68.8
Ciclev10033366m.g Citrus clementina HOM05D006523 ORTHO05D008212 3.8e-31 138.3 112 67.9
Sed0022265 Sechium edule HOM05D006523 ORTHO05D008212 3.8e-31 138.3 114 67.5
unitig_61.g26158 Utricularia gibba HOM05D006523 ORTHO05D008212 3.8e-31 138.3 111 64.9
unitig_70.g32538 Utricularia gibba HOM05D006523 ORTHO05D008212 3.8e-31 138.3 111 64.9
AL6G24460 Arabidopsis lyrata HOM05D006523 ORTHO05D008212 5.0e-31 137.9 113 67.3
arahy.Tifrunner.gnm1.ann1.PJ9UI9 Arachis hypogaea HOM05D006523 ORTHO05D008212 5.0e-31 137.9 117 68.4
Lalb_Chr10g0104601 Lupinus albus HOM05D006523 ORTHO05D008212 5.0e-31 137.9 113 66.4
Phvul.008G232100 Phaseolus vulgaris HOM05D006523 ORTHO05D008212 5.0e-31 137.9 113 67.3
Oeu016465.1 Olea europaea HOM05D006523 ORTHO05D008212 8.5e-31 137.1 114 67.5
HanXRQChr07g0201431 Helianthus annuus HOM05D006523 ORTHO05D008212 1.1e-30 136.7 112 62.5
PSO339G5561 Papaver somniferum HOM05D006523 ORTHO05D008212 2.5e-30 135.6 110 66.4
VMungo0647G1953 Vigna mungo HOM05D006523 ORTHO05D008212 3.2e-30 135.2 113 66.4
Thhalv10014583m.g Eutrema salsugineum HOM05D006523 ORTHO05D008212 4.2e-30 134.8 112 64.3
arahy.Tifrunner.gnm1.ann1.KN5X6X Arachis hypogaea HOM05D006523 ORTHO05D008212 1.2e-29 133.3 113 67.3
FAN06G1109 Fragaria x ananassa HOM05D006523 ORTHO05D008212 2.7e-29 132.1 116 62.9
AT5G13830 Arabidopsis thaliana HOM05D006523 ORTHO05D008212 3.6e-29 131.7 112 62.5
Lsat_1_v5_gn_2_118400 Lactuca sativa HOM05D006523 ORTHO05D008212 3.6e-29 131.7 107 63.6
A10p24510 Brassica napus HOM05D006523 ORTHO05D008212 4.7e-29 131.3 113 63.7
BraA10t44516Z Brassica rapa HOM05D006523 ORTHO05D008212 1.0e-28 130.2 113 62.8
Migut.F01454 Erythranthe guttata HOM05D006523 ORTHO05D008212 1.0e-28 130.2 111 64.0
CARHR199600 Cardamine hirsuta HOM05D006523 ORTHO05D008212 2.3e-28 129.0 112 61.6
BcaC04g19074 Brassica carinata HOM05D006523 ORTHO05D008212 3.0e-28 128.6 113 61.9
C09p63250 Brassica napus HOM05D006523 ORTHO05D008212 3.0e-28 128.6 112 64.3
BolC9t59161H Brassica oleracea HOM05D006523 ORTHO05D008212 3.0e-28 128.6 113 61.9
MELO3C021618.2 Cucumis melo HOM05D006523 ORTHO05D008212 3.0e-28 128.6 140 55.0
Glyma.14G067900 Glycine max HOM05D006523 ORTHO05D008212 5.2e-28 127.9 112 64.3
BcaC04g24249 Brassica carinata HOM05D006523 ORTHO05D008212 6.7e-28 127.5 113 61.9
Os03g0822300 Oryza sativa ssp. japonica HOM05D006523 ORTHO05D008212 1.3e-26 123.2 112 56.2
Hund16077 Selenicereus undatus HOM05D006523 ORTHO05D008212 2.2e-26 122.5 99 65.7
Zm00001eb062790 Zea mays HOM05D006523 ORTHO05D008212 4.8e-26 121.3 112 55.4
CDE07G1400 Ceratophyllum demersum HOM05D006523 ORTHO05D008212 5.3e-25 117.9 103 57.3
Nn2g11152 Nelumbo nucifera HOM05D006523 ORTHO05D008212 2.0e-24 115.9 111 57.7
SEGI_07978 Sequoiadendron giganteum HOM05D006523 ORTHO05D008212 1.1e-22 110.2 115 54.8
Mapoly0038s0066 Marchantia polymorpha HOM05D006523 ORTHO05D008212 2.7e-21 105.5 110 53.6
ATR0559G152 Amborella trichopoda HOM05D006523 ORTHO05D008212 8.0e-21 104.0 98 58.2
AagrBONN_evm.TU.Sc2ySwM_228.3773 Anthoceros agrestis HOM05D006523 ORTHO05D008212 1.0e-20 103.6 112 50.9
Pp3c22_17560 Physcomitrium patens HOM05D006523 ORTHO05D008212 2.6e-19 99.0 107 51.4
SMO145G0100 Selaginella moellendorffii HOM05D006523 ORTHO05D008212 1.4e-17 93.2 115 47.8
Cc08_g07630 Coffea canephora HOM05D006523 ORTHO05D008212 1.3e-15 86.7 71 63.4
arahy.Tifrunner.gnm1.ann1.5RG0UU Arachis hypogaea HOM05D006523 ORTHO05D008212 2.9e-15 85.5 104 52.9
arahy.Tifrunner.gnm1.ann1.96VUID Arachis hypogaea HOM05D006523 ORTHO05D008212 5.0e-15 84.7 103 50.5
MD01G1135900 Malus domestica HOM05D006523 ORTHO05D008212 1.9e-14 82.8 76 57.9
arahy.Tifrunner.gnm1.ann1.67Z0GV Arachis hypogaea HOM05D006523 ORTHO05D008212 2.5e-14 82.4 104 51.9
arahy.Tifrunner.gnm1.ann1.E9XZMQ Arachis hypogaea HOM05D006523 ORTHO05D015430 3.2e-14 82.0 80 61.2
arahy.Tifrunner.gnm1.ann1.TGUH8U Arachis hypogaea HOM05D006523 ORTHO05D008212 4.2e-14 81.6 103 49.5
DCAR_011715 Daucus carota HOM05D006523 ORTHO05D008212 4.2e-14 81.6 76 61.8
vmacro07184 Vaccinium macrocarpon HOM05D006523 ORTHO05D008212 1.6e-13 79.7 111 46.8
Nitab4.5_0004559g0030 Nicotiana tabacum HOM05D006523 ORTHO05D008212 2.7e-13 79.0 44 84.1
AUR62012110 Chenopodium quinoa HOM05D006523 ORTHO05D008212 3.6e-13 78.6 76 57.9
Atru.chr12.422 Acer truncatum HOM05D006523 ORTHO05D008212 8.0e-13 77.4 77 58.4
arahy.Tifrunner.gnm1.ann1.5T6QS1 Arachis hypogaea HOM05D006523 ORTHO05D008212 1.8e-12 76.3 80 58.8
MCO07G108 Micromonas commoda HOM05D006523 ORTHO05D008212 6.8e-12 74.3 112 42.0
Nitab4.5_0000004g0130 Nicotiana tabacum HOM05D006523 ORTHO05D008212 4.8e-10 68.2 93 49.5
CBR_g48797 Chara braunii HOM05D001732 ORTHO05D006715 4.1e-09 65.1 81 38.3
PRCOL_00004637 Prasinoderma coloniale HOM05D006523 ORTHO05D008212 1.2e-08 63.5 125 34.4
CBR_g49713 Chara braunii HOM05D006523 ORTHO05D008212 3.5e-08 62.0 81 37.0
Actinidia02939 Actinidia chinensis HOM05D006523 ORTHO05D008212 1.9e-06 56.2 60 58.3


User provided reference genes

Program Settings