Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p008170 Quercus lobata HOM05D006037 ORTHO05D007384 1.4e-53 212.6 105 100.0
QL02p008273 Quercus lobata HOM05D006037 ORTHO05D007384 7.0e-16 87.4 87 56.3
QL01p040421 Quercus lobata HOM05D006037 ORTHO05D007384 8.3e-09 63.9 59 61.0
Prupe.1G314400 Prunus persica HOM05D006037 ORTHO05D007384 3.1e-08 62.0 101 41.6
RcHm_v2.0_Chr4g0434781 Rosa chinensis HOM05D006037 ORTHO05D007384 4.1e-08 61.6 101 41.6
TPR.G4859 Trifolium pratense HOM05D006037 ORTHO05D007384 4.1e-08 61.6 102 43.1
FvH4_4g26975 Fragaria vesca HOM05D006037 ORTHO05D007384 7.0e-08 60.8 101 41.6
FAN12G3404 Fragaria x ananassa HOM05D006037 ORTHO05D007384 7.0e-08 60.8 101 41.6
MD13G1039000 Malus domestica HOM05D006037 ORTHO05D007384 7.0e-08 60.8 101 40.6
THA.LOC104821921 Tarenaya hassleriana HOM05D006037 ORTHO05D007384 7.0e-08 60.8 59 57.6
Aa31LG7G9120 Aethionema arabicum HOM05D006037 ORTHO05D007384 9.2e-08 60.5 86 46.5
Manes.14G105200 Manihot esculenta HOM05D006037 ORTHO05D007384 9.2e-08 60.5 65 52.3
Rhsim09G0105100 Rhododendron simsii HOM05D006037 ORTHO05D007384 9.2e-08 60.5 64 53.1
Ca_11141_v3 Cicer arietinum L. HOM05D006037 ORTHO05D007384 1.2e-07 60.1 100 38.0
Ca_11146_v3 Cicer arietinum L. HOM05D006037 ORTHO05D007384 1.2e-07 60.1 100 38.0
vmacro10580 Vaccinium macrocarpon HOM05D006037 ORTHO05D007384 1.2e-07 60.1 64 51.6
CANSAT01G2894 Cannabis sativa HOM05D006037 ORTHO05D007384 1.6e-07 59.7 59 54.2
MD16G1039700 Malus domestica HOM05D006037 ORTHO05D007384 1.6e-07 59.7 101 39.6
Actinidia14911 Actinidia chinensis HOM05D006037 ORTHO05D007384 2.7e-07 58.9 64 51.6
arahy.Tifrunner.gnm1.ann1.CBB0MY Arachis hypogaea HOM05D006037 ORTHO05D007384 2.7e-07 58.9 59 54.2
arahy.Tifrunner.gnm1.ann1.NA36PT Arachis hypogaea HOM05D006037 ORTHO05D007384 2.7e-07 58.9 59 54.2
Cc11_g09830 Coffea canephora HOM05D006037 ORTHO05D007384 2.7e-07 58.9 59 54.2
Medtr1g110300 Medicago truncatula HOM05D006037 ORTHO05D007384 2.7e-07 58.9 102 42.2
Sabra10G0092200 Salix brachista HOM05D006037 ORTHO05D007384 2.7e-07 58.9 59 54.2
TAR622G1007 Trochodendron aralioides HOM05D006037 ORTHO05D007384 2.7e-07 58.9 100 38.0
TAR622G1402 Trochodendron aralioides HOM05D006037 ORTHO05D007384 2.7e-07 58.9 100 38.0
Atru.chr11.165 Acer truncatum HOM05D006037 ORTHO05D007384 3.5e-07 58.5 101 43.6
Ciclev10014910m.g Citrus clementina HOM05D006037 ORTHO05D007384 3.5e-07 58.5 102 41.2
Potri.010G122100 Populus trichocarpa HOM05D006037 ORTHO05D007384 3.5e-07 58.5 59 52.5
DCAR_007255 Daucus carota HOM05D006037 ORTHO05D007384 4.5e-07 58.2 64 48.4
ATR1125G090 Amborella trichopoda HOM05D006037 ORTHO05D007384 5.9e-07 57.8 98 40.8
Lj5g0002773 Lotus japonicus HOM05D006037 ORTHO05D007384 5.9e-07 57.8 100 43.0
Nn3g17908 Nelumbo nucifera HOM05D006037 ORTHO05D007384 5.9e-07 57.8 64 50.0
Haze_00627 Corylus avellana HOM05D006037 ORTHO05D007384 7.7e-07 57.4 100 42.0
FAN22G1751 Fragaria x ananassa HOM05D006037 ORTHO05D007384 7.7e-07 57.4 59 54.2
Psat6g225720 Pisum sativum HOM05D006037 ORTHO05D007384 7.7e-07 57.4 102 36.3
Sc11g0003550 Simmondsia chinensis HOM05D006037 ORTHO05D007384 7.7e-07 57.4 101 36.6
unitig_747.g21203 Utricularia gibba HOM05D006037 ORTHO05D007384 7.7e-07 57.4 102 37.3
Aa31LG7G9130 Aethionema arabicum HOM05D006037 ORTHO05D007384 1.0e-06 57.0 65 50.8
MBI09_g07743_MAGBIO Magnolia biondii HOM05D006037 ORTHO05D007384 1.0e-06 57.0 58 55.2
Aqoxy3G00235 Aquilegia oxysepala HOM05D006037 ORTHO05D007384 1.3e-06 56.6 58 53.4
CSS0026176 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 1.3e-06 56.6 58 53.4
CSS0045711 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 1.3e-06 56.6 58 53.4
Duzib248G1272 Durio zibethinus HOM05D006037 ORTHO05D007384 1.3e-06 56.6 102 42.2
Potri.010G122000 Populus trichocarpa HOM05D006037 ORTHO05D007384 1.7e-06 56.2 100 40.0
Sabra10G0092100 Salix brachista HOM05D006037 ORTHO05D007384 1.7e-06 56.2 100 41.0
GSVIVG01011862001 Vitis vinifera HOM05D006037 ORTHO05D007384 2.3e-06 55.8 59 52.5
CDE12G0065 Ceratophyllum demersum HOM05D006037 ORTHO05D007384 2.9e-06 55.5 66 45.5
ECA246G3707 Erigeron canadensis HOM05D006037 ORTHO05D007384 2.9e-06 55.5 65 47.7
HanXRQChr17g0551931 Helianthus annuus HOM05D006037 ORTHO05D007384 3.8e-06 55.1 102 40.2
Peaxi162Scf00753g00122 Petunia axillaris HOM05D006037 ORTHO05D007384 3.8e-06 55.1 100 41.0
SGA_v2.0_scaffold38G14964 Striga asiatica HOM05D006037 ORTHO05D000229 3.8e-06 55.1 59 50.8
EL10Ac6g14338 Beta vulgaris HOM05D006037 ORTHO05D007384 5.0e-06 54.7 58 50.0
Thhalv10007371m.g Eutrema salsugineum HOM05D006037 ORTHO05D007384 5.0e-06 54.7 59 54.2
SalBow8G2496 Salvia bowleyana HOM05D006037 ORTHO05D007384 5.0e-06 54.7 101 39.6
SalBow8G4457 Salvia bowleyana HOM05D006037 ORTHO05D007384 5.0e-06 54.7 101 39.6
Solyc05g009140.3 Solanum lycopersicum HOM05D006037 ORTHO05D007384 5.0e-06 54.7 100 42.0
Sopen05g004860 Solanum pennellii HOM05D006037 ORTHO05D007384 5.0e-06 54.7 100 42.0
AUR62037301 Chenopodium quinoa HOM05D006037 ORTHO05D007384 6.6e-06 54.3 58 51.7
Phvul.007G029700 Phaseolus vulgaris HOM05D006037 ORTHO05D007384 6.6e-06 54.3 64 46.9
Gohir.A03G147800 Gossypium hirsutum HOM05D006037 ORTHO05D007384 8.6e-06 53.9 101 42.6
Gohir.D02G171000 Gossypium hirsutum HOM05D006037 ORTHO05D007384 8.6e-06 53.9 101 42.6
Gorai.005G192200 Gossypium raimondii HOM05D006037 ORTHO05D007384 8.6e-06 53.9 101 42.6


User provided reference genes

Program Settings