Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p008145 Quercus lobata HOM05D004245 ORTHO05D004783 2.2e-123 445.7 227 100.0
QL02p008410 Quercus lobata HOM05D004245 ORTHO05D004783 2.5e-119 432.2 227 96.9
Prupe.1G380600 Prunus persica HOM05D004245 ORTHO05D004783 8.4e-83 310.8 227 72.2
COL.COLO4_26330 Corchorus olitorius HOM05D004245 ORTHO05D004783 5.4e-82 308.1 229 70.7
Gohir.A05G194800 Gossypium hirsutum HOM05D004245 ORTHO05D004783 5.4e-82 308.1 230 72.2
Gorai.009G203100 Gossypium raimondii HOM05D004245 ORTHO05D004783 2.1e-81 306.2 230 70.4
Gohir.D05G198000 Gossypium hirsutum HOM05D004245 ORTHO05D004783 2.7e-81 305.8 230 71.7
Dinv36073 Davidia involucrata HOM05D004245 ORTHO05D004783 1.8e-80 303.1 228 72.8
Duzib116G0455 Durio zibethinus HOM05D004245 ORTHO05D004783 2.5e-79 299.3 184 83.7
Thecc.08G025300 Theobroma cacao HOM05D004245 ORTHO05D004783 7.4e-79 297.7 184 82.1
Manes.18G027901 Manihot esculenta HOM05D004245 ORTHO05D004783 6.2e-78 294.7 177 82.5
TAR381G1372 Trochodendron aralioides HOM05D004245 ORTHO05D004783 8.1e-78 294.3 231 70.6
Ciclev10002428m.g Citrus clementina HOM05D004245 ORTHO05D004783 1.1e-77 293.9 228 71.5
PGR031G3519 Punica granatum HOM05D004245 ORTHO05D004783 3.1e-77 292.4 215 70.2
Duzib093G0228 Durio zibethinus HOM05D004245 ORTHO05D004783 2.6e-76 289.3 189 78.8
FvH4_2g39911 Fragaria vesca HOM05D004245 ORTHO05D004783 4.5e-76 288.5 227 71.4
Oeu029863.1 Olea europaea HOM05D004245 ORTHO05D004783 4.5e-76 288.5 230 70.0
Potri.002G261900 Populus trichocarpa HOM05D004245 ORTHO05D004783 2.2e-75 286.2 228 68.4
Eucgr.F01560 Eucalyptus grandis HOM05D004245 ORTHO05D004783 8.4e-75 284.3 169 83.4
Oeu049959.1 Olea europaea HOM05D004245 ORTHO05D004783 8.4e-75 284.3 231 69.3
Oeu049960.1 Olea europaea HOM05D004245 ORTHO05D004783 8.4e-75 284.3 231 69.3
CANSAT11G0204 Cannabis sativa HOM05D004245 ORTHO05D004783 1.4e-74 283.5 217 70.5
Nn5g29570 Nelumbo nucifera HOM05D004245 ORTHO05D004783 1.4e-74 283.5 185 78.9
Atru.chr13.1763 Acer truncatum HOM05D004245 ORTHO05D004783 1.9e-74 283.1 179 82.1
TWI56G0048 Tripterygium wilfordii HOM05D004245 ORTHO05D004783 1.9e-74 283.1 224 70.5
GSVIVG01009696001 Vitis vinifera HOM05D004245 ORTHO05D004783 1.9e-74 283.1 177 83.1
TAR365G0431 Trochodendron aralioides HOM05D004245 ORTHO05D004783 1.2e-73 280.4 177 80.8
GSVIVG01037336001 Vitis vinifera HOM05D004245 ORTHO05D004783 1.2e-73 280.4 177 82.5
Lalb_Chr10g0103901 Lupinus albus HOM05D004245 ORTHO05D004783 2.1e-73 279.6 235 64.7
MSTRG.1283 Avicennia marina HOM05D004245 ORTHO05D004783 6.0e-73 278.1 231 64.1
Sc02g0006240 Simmondsia chinensis HOM05D004245 ORTHO05D004783 7.9e-73 277.7 191 75.9
Cpa.g.sc36.67 Carica papaya HOM05D004245 ORTHO05D004783 1.0e-72 277.3 177 80.8
Ciclev10009684m.g Citrus clementina HOM05D004245 ORTHO05D004783 1.8e-72 276.6 177 81.9
Manes.05G161000 Manihot esculenta HOM05D004245 ORTHO05D004783 1.8e-72 276.6 172 81.4
Glyma.14G207800 Glycine max HOM05D004245 ORTHO05D004783 3.0e-72 275.8 215 70.2
RcHm_v2.0_Chr6g0300871 Rosa chinensis HOM05D004245 ORTHO05D004783 1.1e-71 273.9 228 68.0
Oeu056187.1 Olea europaea HOM05D004245 ORTHO05D004783 3.3e-71 272.3 178 80.3
MD15G1031300 Malus domestica HOM05D004245 ORTHO05D004783 5.7e-71 271.6 177 78.5
TWI12G0235 Tripterygium wilfordii HOM05D004245 ORTHO05D004783 7.4e-71 271.2 178 79.8
Lj4A41T61 Lonicera japonica HOM05D004245 ORTHO05D004783 9.6e-71 270.8 181 79.0
MD08G1034400 Malus domestica HOM05D004245 ORTHO05D004783 1.3e-70 270.4 216 66.2
HanXRQChr05g0151891 Helianthus annuus HOM05D004245 ORTHO05D004783 2.1e-70 269.6 234 65.4
THA.LOC104813208 Tarenaya hassleriana HOM05D004245 ORTHO05D004783 2.1e-70 269.6 230 66.5
Ah.12g056070 Amaranthus hybridus HOM05D004245 ORTHO05D004783 3.7e-70 268.9 213 69.0
Phvul.008G243100 Phaseolus vulgaris HOM05D004245 ORTHO05D004783 3.7e-70 268.9 232 67.2
Aqoxy2G01756 Aquilegia oxysepala HOM05D004245 ORTHO05D004783 4.8e-70 268.5 172 79.7
Migut.N00497 Erythranthe guttata HOM05D004245 ORTHO05D004783 8.2e-70 267.7 218 68.3
VMungo0647G1970 Vigna mungo HOM05D004245 ORTHO05D004783 8.2e-70 267.7 227 67.8
MELO3C010935.2 Cucumis melo HOM05D004245 ORTHO05D004783 1.4e-69 266.9 231 66.2
Sp5g14800 Schrenkiella parvula HOM05D004245 ORTHO05D004783 2.4e-69 266.2 177 76.8
CsaV3_2G028630 Cucumis sativus L. HOM05D004245 ORTHO05D004783 4.1e-69 265.4 228 64.5
MSTRG.22299 Avicennia marina HOM05D004245 ORTHO05D004783 9.0e-69 264.2 169 78.7
AUR62027309 Chenopodium quinoa HOM05D004245 ORTHO05D004783 1.2e-68 263.8 179 76.5
EL10Ac5g11904 Beta vulgaris HOM05D004245 ORTHO05D004783 1.5e-68 263.5 181 76.8
MBI16_g37698_MAGBIO Magnolia biondii HOM05D004245 ORTHO05D004783 2.6e-68 262.7 175 77.7
Actinidia22552 Actinidia chinensis HOM05D004245 ORTHO05D004783 3.4e-68 262.3 229 65.5
AL5G26160 Arabidopsis lyrata HOM05D004245 ORTHO05D004783 5.8e-68 261.5 170 78.2
AT3G46940 Arabidopsis thaliana HOM05D004245 ORTHO05D004783 5.8e-68 261.5 191 70.7
Thhalv10011147m.g Eutrema salsugineum HOM05D004245 ORTHO05D004783 5.8e-68 261.5 177 74.6
Actinidia29827 Actinidia chinensis HOM05D004245 ORTHO05D004783 7.6e-68 261.2 177 75.7
Sabra04G0142000 Salix brachista HOM05D004298 ORTHO05D006236 7.6e-68 261.2 218 66.1
C03p71110 Brassica napus HOM05D004245 ORTHO05D004783 1.3e-67 260.4 177 74.6
BolC3t19396H Brassica oleracea HOM05D004245 ORTHO05D004783 1.3e-67 260.4 177 74.6
A06p20620 Brassica napus HOM05D004245 ORTHO05D004783 1.7e-67 260.0 207 68.1
MBI16_g37752_MAGBIO Magnolia biondii HOM05D004245 ORTHO05D004783 1.7e-67 260.0 167 79.6
Atru.chr13.494 Acer truncatum HOM05D004245 ORTHO05D004783 2.2e-67 259.6 148 87.8
Carub.0005s1316 Capsella rubella HOM05D004245 ORTHO05D004783 2.2e-67 259.6 179 72.6
CARHR155580 Cardamine hirsuta HOM05D004245 ORTHO05D004783 2.2e-67 259.6 169 76.9
PSO832G4589 Papaver somniferum HOM05D004245 ORTHO05D004783 2.2e-67 259.6 170 79.4
BraA06t25141Z Brassica rapa HOM05D004245 ORTHO05D004783 2.9e-67 259.2 177 74.0
Cc10_g03000 Coffea canephora HOM05D004245 ORTHO05D004783 2.9e-67 259.2 171 75.4
TWI36G0248 Tripterygium wilfordii HOM05D004245 ORTHO05D004783 6.5e-67 258.1 230 66.1
Aa31LG4G15890 Aethionema arabicum HOM05D004245 ORTHO05D004783 4.2e-66 255.4 178 75.3
Cc00_g32610 Coffea canephora HOM05D004245 ORTHO05D004783 4.2e-66 255.4 174 77.0
Nn1g05030 Nelumbo nucifera HOM05D004245 ORTHO05D004783 4.2e-66 255.4 202 67.3
CiPaw.15G077400 Carya illinoinensis HOM05D004245 ORTHO05D004783 5.5e-66 255.0 148 86.5
AUR62007424 Chenopodium quinoa HOM05D004245 ORTHO05D004783 5.5e-66 255.0 179 76.5
HanXRQChr08g0223611 Helianthus annuus HOM05D004245 ORTHO05D004783 7.1e-66 254.6 227 64.8
CAN.G1273.28 Capsicum annuum HOM05D004245 ORTHO05D004783 1.2e-65 253.8 173 76.3
ECA246G2445 Erigeron canadensis HOM05D004245 ORTHO05D004783 6.1e-65 251.5 168 76.2
PGSC0003DMG400024725 Solanum tuberosum HOM05D004245 ORTHO05D004783 1.8e-64 250.0 173 75.7
Actinidia38010 Actinidia chinensis HOM05D004245 ORTHO05D004783 2.3e-64 249.6 177 72.9
Psat5g146640 Pisum sativum HOM05D004245 ORTHO05D004783 3.0e-64 249.2 138 89.1
Sopen01g041550 Solanum pennellii HOM05D004245 ORTHO05D004783 5.1e-64 248.4 155 80.6
PGSC0003DMG400022502 Solanum tuberosum HOM05D004245 ORTHO05D004783 5.1e-64 248.4 155 80.6
Ca_15096_v3 Cicer arietinum L. HOM05D004245 ORTHO05D004783 6.7e-64 248.1 152 82.2
Solyc01g100030.5.1 Solanum lycopersicum HOM05D004245 ORTHO05D004783 6.7e-64 248.1 184 70.7
Medtr3g063110 Medicago truncatula HOM05D004245 ORTHO05D004783 8.7e-64 247.7 140 86.4
Sopen01g043550 Solanum pennellii HOM05D004245 ORTHO05D004783 8.7e-64 247.7 173 74.6
Lalb_Chr17g0345751 Lupinus albus HOM05D004245 ORTHO05D004783 1.9e-63 246.5 189 69.8
Rhsim07G0237700 Rhododendron simsii HOM05D004245 ORTHO05D004783 1.9e-63 246.5 228 61.4
ClCG08G015180 Citrullus lanatus HOM05D004245 ORTHO05D004783 3.3e-63 245.7 173 73.4
TPR.G37404 Trifolium pratense HOM05D004245 ORTHO05D004783 7.4e-63 244.6 140 85.7
Rhsim06G0034500 Rhododendron simsii HOM05D004245 ORTHO05D004783 9.7e-63 244.2 177 71.8
CDE12G0639 Ceratophyllum demersum HOM05D004245 ORTHO05D004783 1.3e-62 243.8 166 72.3
TPR.G19056 Trifolium pratense HOM05D004245 ORTHO05D004783 1.3e-62 243.8 140 85.0
DCAR_020361 Daucus carota HOM05D004245 ORTHO05D004783 1.6e-62 243.4 145 83.4
CDE04G3793 Ceratophyllum demersum HOM05D004245 ORTHO05D004783 8.2e-62 241.1 227 58.6
PSO591G0217 Papaver somniferum HOM05D004245 ORTHO05D004783 1.1e-61 240.7 170 75.3
CAN.G134.178 Capsicum annuum HOM05D004245 ORTHO05D004783 1.8e-61 240.0 156 78.2
Glyma.18G048400 Glycine max HOM05D004245 ORTHO05D004783 4.1e-61 238.8 140 82.9
MD08G1034500 Malus domestica HOM05D004245 ORTHO05D004783 4.1e-61 238.8 177 70.6
HPP92_000905 Vanilla planifolia HOM05D004245 ORTHO05D004783 1.5e-60 236.9 232 59.9
ATR0124G052 Amborella trichopoda HOM05D004245 ORTHO05D004783 2.6e-60 236.1 166 74.1
Pp3c16_25660 Physcomitrium patens HOM05D004245 ORTHO05D004783 5.9e-60 235.0 163 75.5
SEGI_17618 Sequoiadendron giganteum HOM05D004245 ORTHO05D004783 5.9e-60 235.0 157 73.2
Zm00001eb052270 Zea mays HOM05D004245 ORTHO05D004783 6.5e-59 231.5 165 74.5
PSO764G0231 Papaver somniferum HOM05D004245 ORTHO05D004783 1.1e-58 230.7 168 70.8
SEGI_12681 Sequoiadendron giganteum HOM05D004245 ORTHO05D004783 1.4e-58 230.3 184 65.8
Mapoly0133s0010 Marchantia polymorpha HOM05D004245 ORTHO05D004783 4.2e-58 228.8 172 66.3
SMO146G0275 Selaginella moellendorffii HOM05D004245 ORTHO05D004783 1.6e-57 226.9 138 80.4
Solyc01g097970.4 Solanum lycopersicum HOM05D004245 ORTHO05D004783 5.1e-56 221.9 142 78.9
Sabra02G0198600 Salix brachista HOM05D004245 ORTHO05D004783 1.5e-55 220.3 167 69.5
AagrBONN_evm.TU.Sc2ySwM_117.1092 Anthoceros agrestis HOM05D004245 ORTHO05D004783 9.7e-55 217.6 168 64.3
CBR_g37457 Chara braunii HOM05D004245 ORTHO05D004783 6.9e-53 211.5 154 68.8
Os03g0669100 Oryza sativa ssp. japonica HOM05D004245 ORTHO05D004783 9.1e-53 211.1 154 74.0
HPP92_000939 Vanilla planifolia HOM05D004245 ORTHO05D004783 1.0e-51 207.6 163 69.3
Cfa018144 Carpinus fangiana HOM05D004245 ORTHO05D004783 2.2e-51 206.5 177 67.2
MCO05G374 Micromonas commoda HOM05D004245 ORTHO05D004783 2.9e-51 206.1 138 74.6
Cre16.g667850 Chlamydomonas reinhardtii HOM05D004245 ORTHO05D004783 2.0e-47 193.4 166 60.8
Cfa018886 Carpinus fangiana HOM05D004245 ORTHO05D004783 8.5e-43 177.9 157 68.8
PRCOL_00002276 Prasinoderma coloniale HOM05D004245 ORTHO05D004783 6.7e-40 168.3 140 60.7
Peaxi162Scf00690g00216 Petunia axillaris HOM05D004245 ORTHO05D004783 1.4e-37 160.6 143 62.9
Cc10_g02990 Coffea canephora HOM05D004245 ORTHO05D004783 1.8e-37 160.2 130 63.8
CAN.G1226.1 Capsicum annuum HOM05D004245 ORTHO05D004783 2.0e-36 156.8 137 61.3
Nitab4.5_0004954g0010 Nicotiana tabacum HOM05D004245 ORTHO05D004783 2.6e-36 156.4 143 58.0
PGSC0003DMG400005159 Solanum tuberosum HOM05D004245 ORTHO05D004783 3.5e-36 156.0 137 61.3
Solyc04g080250.3 Solanum lycopersicum HOM05D004245 ORTHO05D004783 8.5e-35 151.4 137 60.6
unitig_85.g27241 Utricularia gibba HOM05D004245 ORTHO05D004783 1.5e-34 150.6 81 85.2
QL02p008415 Quercus lobata HOM05D000526 ORTHO05D004783 5.5e-34 148.7 112 72.3
CBR_g21266 Chara braunii HOM05D004245 ORTHO05D004783 1.5e-31 140.6 137 54.0
unitig_578.g16734 Utricularia gibba HOM05D004245 ORTHO05D004783 2.2e-30 136.7 127 61.4
Oeu029862.1 Olea europaea HOM05D004245 ORTHO05D004783 2.8e-30 136.3 103 66.0
Hund11091 Selenicereus undatus HOM05D004245 ORTHO05D004783 2.4e-29 133.3 151 56.3
CBR_g21272 Chara braunii HOM05D004245 ORTHO05D004783 7.7e-28 128.3 138 47.8
Sed0016726 Sechium edule HOM05D004245 ORTHO05D004783 1.7e-27 127.1 148 54.1
SHI03308 Sapria himalayana HOM05D004245 ORTHO05D004783 2.2e-27 126.7 80 80.0
DCAR_020970 Daucus carota HOM05D004245 ORTHO05D004783 1.5e-26 124.0 97 66.0
vmacro04520 Vaccinium macrocarpon HOM05D004245 ORTHO05D004783 1.2e-25 120.9 101 65.3
Atru.chr6.1642 Acer truncatum HOM05D004245 ORTHO05D004783 2.1e-25 120.2 82 73.2
Sopen04g033830 Solanum pennellii HOM05D004245 ORTHO05D004783 6.1e-25 118.6 88 68.2
SGA_v2.0_scaffold326G48710 Striga asiatica HOM05D004245 ORTHO05D004783 8.0e-25 118.2 98 66.3
Peaxi162Scf00037g01715 Petunia axillaris HOM05D004245 ORTHO05D004783 1.8e-24 117.1 90 73.3
Nitab4.5_0006179g0050 Nicotiana tabacum HOM05D004245 ORTHO05D004783 4.0e-24 115.9 117 59.8
Nitab4.5_0002612g0110 Nicotiana tabacum HOM05D004245 ORTHO05D004783 6.8e-24 115.2 98 68.4
Lsat_1_v5_gn_8_78860 Lactuca sativa HOM05D004245 ORTHO05D004783 7.5e-23 111.7 153 49.0
SHI09478 Sapria himalayana HOM05D004245 ORTHO05D004783 4.1e-21 105.9 70 74.3
Lsat_1_v5_gn_5_29181 Lactuca sativa HOM05D004245 ORTHO05D004783 7.0e-21 105.1 151 47.7
vmacro21634 Vaccinium macrocarpon HOM05D004245 ORTHO05D004783 2.3e-19 100.1 146 49.3
Atru.chr6.1643 Acer truncatum HOM05D004245 ORTHO05D004783 2.9e-19 99.8 69 72.5
Peaxi162Scf00225g00127 Petunia axillaris HOM05D004245 ORTHO05D004783 2.9e-19 99.8 86 64.0
Nitab4.5_0002361g0180 Nicotiana tabacum HOM05D004245 ORTHO05D004783 5.0e-19 99.0 59 83.1
Nitab4.5_0002840g0080 Nicotiana tabacum HOM05D004245 ORTHO05D004783 2.5e-18 96.7 69 73.9
Atru.chr2.1957 Acer truncatum HOM05D004245 ORTHO05D004783 1.0e-16 91.3 56 75.0
Atru.chr13.1771 Acer truncatum HOM05D004245 ORTHO05D004783 9.8e-15 84.7 83 59.0
SHI20747 Sapria himalayana HOM05D003927 ORTHO05D004905 1.1e-13 81.3 63 66.7
FAN15G2450 Fragaria x ananassa HOM05D004245 ORTHO05D004783 5.4e-13 79.0 117 49.6
COL.COLO4_04917 Corchorus olitorius HOM05D004245 ORTHO05D004783 2.3e-11 73.6 44 77.3
Lsat_1_v5_gn_0_32861 Lactuca sativa HOM05D031264 ORTHO05D004783 6.6e-11 72.0 139 36.7
SalBow8G3107 Salvia bowleyana HOM05D004245 ORTHO05D004783 1.5e-10 70.9 84 56.0
Eucgr.C01497 Eucalyptus grandis HOM05D004245 ORTHO05D004783 1.9e-10 70.5 44 79.5
Dinv03456 Davidia involucrata HOM05D004245 ORTHO05D004783 4.7e-09 65.9 108 43.5
Actinidia15321 Actinidia chinensis HOM05D004245 ORTHO05D004783 6.2e-09 65.5 57 61.4
FAN27G0770 Fragaria x ananassa HOM05D004245 ORTHO05D004783 1.4e-08 64.3 53 69.8
arahy.Tifrunner.gnm1.ann1.8Q4PR4 Arachis hypogaea HOM05D004245 ORTHO05D004783 1.8e-08 63.9 36 80.6
arahy.Tifrunner.gnm1.ann1.20SHP8 Arachis hypogaea HOM05D004245 ORTHO05D004783 1.7e-06 57.4 30 86.7
arahy.Tifrunner.gnm1.ann1.3ZQ4SN Arachis hypogaea HOM05D004245 ORTHO05D004783 1.7e-06 57.4 30 86.7
Nitab4.5_0000110g0590 Nicotiana tabacum HOM05D004245 ORTHO05D004783 4.9e-06 55.8 47 59.6
SGA_v2.0_scaffold54G19528 Striga asiatica HOM05D016034 ORTHO05D000013 4.9e-06 55.8 30 90.0
unitig_85.g27240 Utricularia gibba HOM05D004245 ORTHO05D004783 8.3e-06 55.1 62 54.8


User provided reference genes

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