Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p006968 Quercus lobata HOM05D008210 ORTHO05D010078 6.1e-44 180.6 106 100.0
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 2.8e-20 102.1 79 69.6
Cfa018466 Carpinus fangiana HOM05D008210 ORTHO05D010078 4.4e-18 94.7 80 65.0
Rhsim06G0039800 Rhododendron simsii HOM05D008210 ORTHO05D010078 4.4e-18 94.7 80 61.2
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 1.4e-16 89.7 73 63.0
CiPaw.15G068700 Carya illinoinensis HOM05D008210 ORTHO05D010078 1.9e-16 89.4 79 59.5
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 3.5e-15 85.1 79 51.9
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 3.5e-15 85.1 79 51.9
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 3.5e-15 85.1 106 42.5
Prupe.1G386500 Prunus persica HOM05D008210 ORTHO05D010078 4.6e-15 84.7 87 57.5
Sabra14G0027900 Salix brachista HOM05D008210 ORTHO05D010078 1.7e-14 82.8 80 58.8
Hma1.2p1_0023F.1_g015200 Hydrangea macrophylla HOM05D008210 ORTHO05D010078 1.5e-13 79.7 81 54.3
Potri.014G038500 Populus trichocarpa HOM05D008210 ORTHO05D010078 5.6e-13 77.8 80 55.0
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 1.6e-12 76.3 86 45.3
FvH4_2g40530 Fragaria vesca HOM05D008210 ORTHO05D010078 2.8e-12 75.5 81 53.1
COL.COLO4_26398 Corchorus olitorius HOM05D008210 ORTHO05D010078 4.7e-12 74.7 74 55.4
Potri.002G130500 Populus trichocarpa HOM05D008210 ORTHO05D010078 4.7e-12 74.7 71 57.7
FAN15G3542 Fragaria x ananassa HOM05D008210 ORTHO05D010078 8.1e-12 73.9 81 51.9
Manes.05G166500 Manihot esculenta HOM05D008210 ORTHO05D010078 1.4e-11 73.2 109 48.6
Ciclev10002912m.g Citrus clementina HOM05D008210 ORTHO05D010078 2.3e-11 72.4 79 46.8
Lsat_1_v5_gn_1_19601 Lactuca sativa HOM05D008210 ORTHO05D010078 3.1e-11 72.0 81 48.1
Gohir.A06G013600 Gossypium hirsutum HOM05D008210 ORTHO05D010078 4.0e-11 71.6 86 43.0
RcHm_v2.0_Chr6g0300191 Rosa chinensis HOM05D008210 ORTHO05D010078 4.0e-11 71.6 79 50.6
Aqoxy6G00950 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.2e-10 70.1 59 57.6
Gohir.D06G011200 Gossypium hirsutum HOM05D008210 ORTHO05D010078 1.2e-10 70.1 87 44.8
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 1.5e-10 69.7 69 53.6
Dinv36022 Davidia involucrata HOM05D000260 ORTHO05D002276 1.5e-10 69.7 71 56.3
Eucgr.F01503 Eucalyptus grandis HOM05D008210 ORTHO05D010078 1.5e-10 69.7 91 47.3
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 1.5e-10 69.7 79 45.6
Cpa.g.sc64.23 Carica papaya HOM05D008210 ORTHO05D010078 3.4e-10 68.6 81 46.9
TAR628G0004 Trochodendron aralioides HOM05D008210 ORTHO05D010078 3.4e-10 68.6 71 57.7
Medtr3g111460 Medicago truncatula HOM05D008210 ORTHO05D010078 4.4e-10 68.2 80 50.0
SGA_v2.0_scaffold14G07009 Striga asiatica HOM05D008210 ORTHO05D010078 5.8e-10 67.8 93 48.4
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 7.6e-10 67.4 80 48.8
Glyma.04G035200 Glycine max HOM05D008210 ORTHO05D010078 1.3e-09 66.6 81 49.4
ClCG08G015480 Citrullus lanatus HOM05D022138 ORTHO05D010078 1.7e-09 66.2 82 46.3
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 1.7e-09 66.2 85 49.4
Lj1g0017592 Lotus japonicus HOM05D008210 ORTHO05D010078 1.7e-09 66.2 79 49.4
Atru.chr13.582 Acer truncatum HOM05D008210 ORTHO05D010078 3.8e-09 65.1 69 49.3
Nitab4.5_0000110g0010 Nicotiana tabacum HOM05D008210 ORTHO05D010078 8.4e-09 63.9 84 44.0
Glyma.06G035100 Glycine max HOM05D008210 ORTHO05D010078 1.1e-08 63.5 68 54.4
VMungo1309G3066 Vigna mungo HOM05D008210 ORTHO05D010078 1.1e-08 63.5 68 51.5
MSTRG.22279 Avicennia marina HOM05D008210 ORTHO05D010078 1.9e-08 62.8 86 50.0
MELO3C010908.2 Cucumis melo HOM05D022138 ORTHO05D010078 1.9e-08 62.8 70 51.4
Ah.09g236870 Amaranthus hybridus HOM05D008210 ORTHO05D010078 2.4e-08 62.4 84 39.3
Ah.09g236890 Amaranthus hybridus HOM05D008210 ORTHO05D010078 2.4e-08 62.4 84 39.3
arahy.Tifrunner.gnm1.ann1.KBQ6U1 Arachis hypogaea HOM05D008210 ORTHO05D010078 2.4e-08 62.4 82 46.3
Phvul.009G061375 Phaseolus vulgaris HOM05D008210 ORTHO05D010078 2.4e-08 62.4 68 48.5
SalBow8G0954 Salvia bowleyana HOM05D008210 ORTHO05D010078 3.2e-08 62.0 70 54.3
Ca_15536_v3 Cicer arietinum L. HOM05D008210 ORTHO05D010078 5.4e-08 61.2 78 46.2
ECA247G0280 Erigeron canadensis HOM05D008210 ORTHO05D010078 5.4e-08 61.2 105 36.2
GSVIVG01009614001 Vitis vinifera HOM05D008210 ORTHO05D010078 5.4e-08 61.2 80 45.0
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 1.2e-07 60.1 88 43.2
Sc02g0006720 Simmondsia chinensis HOM05D008210 ORTHO05D010078 2.1e-07 59.3 69 47.8
C08p06120 Brassica napus HOM05D015684 ORTHO05D010078 2.7e-07 58.9 74 45.9
BolC8t47395H Brassica oleracea HOM05D015684 ORTHO05D010078 2.7e-07 58.9 74 45.9
A08p05560 Brassica napus HOM05D015684 ORTHO05D010078 3.5e-07 58.5 74 45.9
Lalb_Chr08g0245741 Lupinus albus HOM05D008210 ORTHO05D010078 3.5e-07 58.5 80 41.2
Cc10_g03600 Coffea canephora HOM05D008210 ORTHO05D010078 4.6e-07 58.2 81 45.7
DCAR_019491 Daucus carota HOM05D060876 ORTHO05D010078 4.6e-07 58.2 55 61.8
BcaC07g37206 Brassica carinata HOM05D015684 ORTHO05D010078 7.8e-07 57.4 74 44.6
CsaV3_2G028310 Cucumis sativus L. HOM05D022138 ORTHO05D010078 7.8e-07 57.4 74 47.3
Psat0s3268g0120 Pisum sativum HOM05D008210 ORTHO05D010078 7.8e-07 57.4 78 46.2
EL10Ac8g19959 Beta vulgaris HOM05D008210 ORTHO05D010078 1.0e-06 57.0 84 41.7
BcaB04g17510 Brassica carinata HOM05D015684 ORTHO05D010078 1.0e-06 57.0 74 45.9
AL1G53960 Arabidopsis lyrata HOM05D015684 ORTHO05D010078 2.3e-06 55.8 62 43.5
Migut.N02682 Erythranthe guttata HOM05D008210 ORTHO05D010078 3.0e-06 55.5 46 58.7
Nn7g37755 Nelumbo nucifera HOM05D008210 ORTHO05D010078 3.0e-06 55.5 63 46.0
BraA08t32560Z Brassica rapa HOM05D015684 ORTHO05D010078 3.9e-06 55.1 74 43.2
Nn6g32154 Nelumbo nucifera HOM05D008210 ORTHO05D010078 5.1e-06 54.7 43 60.5
Carub.0001s3639 Capsella rubella HOM05D015684 ORTHO05D010078 8.6e-06 53.9 58 48.3


User provided reference genes

Program Settings