Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p006168 Quercus lobata HOM05D002914 ORTHO05D003196 3.1e-63 245.0 124 100.0
Atru.chr13.614 Acer truncatum HOM05D002914 ORTHO05D003196 1.8e-23 112.8 124 55.6
Thecc.08G014700 Theobroma cacao HOM05D002914 ORTHO05D003196 5.3e-23 111.3 124 58.9
Potri.014G035400 Populus trichocarpa HOM05D002914 ORTHO05D003196 3.5e-22 108.6 99 56.6
Medtr3g101240 Medicago truncatula HOM05D002914 ORTHO05D003196 5.0e-21 104.8 112 50.9
Glyma.04G036500 Glycine max HOM05D002914 ORTHO05D003196 1.5e-20 103.2 124 47.6
Sed0019897 Sechium edule HOM05D002914 ORTHO05D003196 1.2e-19 100.1 127 46.5
Ca_15973_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 2.7e-19 99.0 124 47.6
ClCG08G015580 Citrullus lanatus HOM05D002914 ORTHO05D003196 3.6e-19 98.6 128 44.5
Glyma.06G036600 Glycine max HOM05D002914 ORTHO05D003196 3.6e-19 98.6 124 46.8
TWI36G0119 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 3.6e-19 98.6 127 48.8
arahy.Tifrunner.gnm1.ann1.HH3ECB Arachis hypogaea HOM05D002914 ORTHO05D003196 4.7e-19 98.2 122 45.1
Lalb_Chr23g0266911 Lupinus albus HOM05D002914 ORTHO05D003196 6.1e-19 97.8 125 46.4
Prupe.1G441900 Prunus persica HOM05D002914 ORTHO05D003196 1.4e-18 96.7 127 52.0
Aqoxy6G00878 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 4.0e-18 95.1 90 56.7
RcHm_v2.0_Chr6g0259071 Rosa chinensis HOM05D002914 ORTHO05D003196 5.2e-18 94.7 85 58.8
Carub.0004s0669 Capsella rubella HOM05D002914 ORTHO05D003196 6.8e-18 94.4 81 59.3
CsaV3_2G028190 Cucumis sativus L. HOM05D002914 ORTHO05D003196 6.8e-18 94.4 128 43.8
Dinv42126 Davidia involucrata HOM05D002914 ORTHO05D003196 6.8e-18 94.4 125 44.8
Lj1g0002449 Lotus japonicus HOM05D002914 ORTHO05D003196 6.8e-18 94.4 121 45.5
Lalb_Chr16g0384551 Lupinus albus HOM05D002914 ORTHO05D003196 8.8e-18 94.0 130 43.1
TPR.G40737 Trifolium pratense HOM05D002914 ORTHO05D003196 1.2e-17 93.6 127 48.0
Medtr4g086780 Medicago truncatula HOM05D002914 ORTHO05D003196 3.4e-17 92.0 77 57.1
FvH4_2g35030 Fragaria vesca HOM05D002914 ORTHO05D003196 9.8e-17 90.5 118 47.5
AT2G26520 Arabidopsis thaliana HOM05D002914 ORTHO05D003196 2.2e-16 89.4 85 57.6
CsaV3_7G008810 Cucumis sativus L. HOM05D002914 ORTHO05D003196 2.2e-16 89.4 101 52.5
Psat5g044840 Pisum sativum HOM05D002914 ORTHO05D003196 2.8e-16 89.0 110 46.4
MELO3C028578.2 Cucumis melo HOM05D002914 ORTHO05D003196 3.7e-16 88.6 83 56.6
Aqoxy5G01394 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 4.8e-16 88.2 123 44.7
ClCG02G005720 Citrullus lanatus HOM05D002914 ORTHO05D003196 4.8e-16 88.2 83 56.6
FAN15G3578 Fragaria x ananassa HOM05D002914 ORTHO05D003196 8.3e-16 87.4 124 42.7
Hma1.2p1_0584F.1_g183120 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 8.3e-16 87.4 116 45.7
Gorai.005G104900 Gossypium raimondii HOM05D002914 ORTHO05D003196 1.1e-15 87.0 103 49.5
Sp4g07710 Schrenkiella parvula HOM05D002914 ORTHO05D003196 1.1e-15 87.0 120 45.0
Sed0007891 Sechium edule HOM05D002914 ORTHO05D003196 1.8e-15 86.3 127 42.5
AL4G19370 Arabidopsis lyrata HOM05D002914 ORTHO05D003196 2.4e-15 85.9 138 44.2
Manes.05G170100 Manihot esculenta HOM05D002914 ORTHO05D003196 2.4e-15 85.9 121 47.1
Nn1g05872 Nelumbo nucifera HOM05D002914 ORTHO05D003196 2.4e-15 85.9 124 47.6
CDE02G0277 Ceratophyllum demersum HOM05D002914 ORTHO05D003196 4.1e-15 85.1 128 43.0
Atru.chr5.2809 Acer truncatum HOM05D002914 ORTHO05D003196 5.4e-15 84.7 127 44.1
Duzib248G0090 Durio zibethinus HOM05D002914 ORTHO05D003196 5.4e-15 84.7 85 51.8
Rhsim05G0080600 Rhododendron simsii HOM05D002914 ORTHO05D003196 5.4e-15 84.7 141 41.8
Cfa005429 Carpinus fangiana HOM05D002914 ORTHO05D003196 7.0e-15 84.3 118 44.9
Migut.B00310 Erythranthe guttata HOM05D002914 ORTHO05D003196 9.1e-15 84.0 82 54.9
FAN20G2785 Fragaria x ananassa HOM05D002914 ORTHO05D003196 9.1e-15 84.0 124 41.1
FAN27G2590 Fragaria x ananassa HOM05D002914 ORTHO05D003196 9.1e-15 84.0 124 41.9
Glyma.07G210000 Glycine max HOM05D002914 ORTHO05D003196 1.2e-14 83.6 87 50.6
Gohir.D02G092940 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.2e-14 83.6 103 48.5
TAR376G1047 Trochodendron aralioides HOM05D002914 ORTHO05D003196 1.2e-14 83.6 129 45.0
DCAR_022064 Daucus carota HOM05D002914 ORTHO05D003196 1.6e-14 83.2 85 51.8
TAR628G0868 Trochodendron aralioides HOM05D002914 ORTHO05D003196 1.6e-14 83.2 127 45.7
Nn5g30169 Nelumbo nucifera HOM05D002914 ORTHO05D003196 2.7e-14 82.4 112 44.6
TWI31G1086 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 2.7e-14 82.4 118 42.4
Ciclev10002811m.g Citrus clementina HOM05D002914 ORTHO05D003196 4.5e-14 81.6 104 51.0
Aa31LG5G9350 Aethionema arabicum HOM05D002914 ORTHO05D003196 5.9e-14 81.3 127 40.9
ECA236G0292 Erigeron canadensis HOM05D002914 ORTHO05D003196 5.9e-14 81.3 138 39.9
PGR083G2546 Punica granatum HOM05D002914 ORTHO05D003196 5.9e-14 81.3 124 41.1
Duzib052G1256 Durio zibethinus HOM05D002914 ORTHO05D003196 7.7e-14 80.9 125 45.6
SGA_v2.0_scaffold58G20610 Striga asiatica HOM05D002914 ORTHO05D003196 1.0e-13 80.5 82 47.6
Gohir.A03G191200 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.3e-13 80.1 123 47.2
THA.LOC104803788 Tarenaya hassleriana HOM05D002914 ORTHO05D003196 1.7e-13 79.7 111 43.2
CANSAT25G0897 Cannabis sativa HOM05D002914 ORTHO05D003196 2.2e-13 79.3 95 45.3
Potri.004G144400 Populus trichocarpa HOM05D002914 ORTHO05D003196 2.2e-13 79.3 95 47.4
VMungo0251G3532 Vigna mungo HOM05D002914 ORTHO05D003196 2.2e-13 79.3 86 48.8
Lalb_Chr09g0328151 Lupinus albus HOM05D002914 ORTHO05D003196 2.9e-13 79.0 82 50.0
Gohir.A06G015600 Gossypium hirsutum HOM05D002914 ORTHO05D003196 3.8e-13 78.6 61 55.7
Gohir.D06G013700 Gossypium hirsutum HOM05D002914 ORTHO05D003196 3.8e-13 78.6 61 55.7
Gorai.010G016300 Gossypium raimondii HOM05D002914 ORTHO05D003196 3.8e-13 78.6 61 55.7
Sopen01g050550 Solanum pennellii HOM05D002914 ORTHO05D003196 3.8e-13 78.6 129 38.8
Nitab4.5_0002673g0030 Nicotiana tabacum HOM05D002914 ORTHO05D003196 5.0e-13 78.2 114 37.7
Oeu003691.1 Olea europaea HOM05D002914 ORTHO05D003196 5.0e-13 78.2 121 39.7
Solyc01g108330.2 Solanum lycopersicum HOM05D002914 ORTHO05D003196 5.0e-13 78.2 134 41.0
MELO3C010895.2 Cucumis melo HOM05D002914 ORTHO05D003196 8.5e-13 77.4 128 39.8
CiPaw.05G054900 Carya illinoinensis HOM05D002914 ORTHO05D003196 1.5e-12 76.6 119 40.3
HanXRQChr04g0128331 Helianthus annuus HOM05D002914 ORTHO05D003196 1.5e-12 76.6 104 41.3
Sc15g0006440 Simmondsia chinensis HOM05D002914 ORTHO05D003196 1.5e-12 76.6 59 59.3
EL10Ac9g21822 Beta vulgaris HOM05D002914 ORTHO05D003196 2.5e-12 75.9 55 60.0
CDE01G0545 Ceratophyllum demersum HOM05D000767 ORTHO05D003196 2.5e-12 75.9 129 40.3
Oeu013680.1 Olea europaea HOM05D002914 ORTHO05D003196 2.5e-12 75.9 125 40.0
PGSC0003DMG400025804 Solanum tuberosum HOM05D002914 ORTHO05D003196 2.5e-12 75.9 133 39.8
Hma1.2p1_1589F.1_g292395 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 3.2e-12 75.5 79 51.9
Hma1.2p1_2598F.1_g325150 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 3.2e-12 75.5 79 51.9
Nitab4.5_0002462g0040 Nicotiana tabacum HOM05D002914 ORTHO05D003196 3.2e-12 75.5 68 54.4
Peaxi162Scf00016g00161 Petunia axillaris HOM05D002914 ORTHO05D003196 3.2e-12 75.5 69 53.6
TAR625G1140 Trochodendron aralioides HOM05D002914 ORTHO05D003196 3.2e-12 75.5 98 45.9
Nitab4.5_0000876g0210 Nicotiana tabacum HOM05D002914 ORTHO05D003196 9.4e-12 73.9 124 38.7
ATR0225G004 Amborella trichopoda HOM05D002914 ORTHO05D003196 1.2e-11 73.6 128 43.0
Cpa.g.sc376.2 Carica papaya HOM05D002914 ORTHO05D003196 1.2e-11 73.6 98 42.9
Lj5P206T48 Lonicera japonica HOM05D002914 ORTHO05D003196 2.1e-11 72.8 118 47.5
Nitab4.5_0000876g0190 Nicotiana tabacum HOM05D002914 ORTHO05D003196 2.1e-11 72.8 109 38.5
RcHm_v2.0_Chr6g0306971 Rosa chinensis HOM05D002914 ORTHO05D003196 2.1e-11 72.8 116 40.5
Eucgr.I01175 Eucalyptus grandis HOM05D002914 ORTHO05D003196 2.7e-11 72.4 99 41.4
Psat7g121600 Pisum sativum HOM05D002914 ORTHO05D003196 2.7e-11 72.4 85 40.0
Potri.009G106300 Populus trichocarpa HOM05D002914 ORTHO05D003196 4.7e-11 71.6 94 42.6
Gorai.005G240100 Gossypium raimondii HOM05D002914 ORTHO05D003196 6.1e-11 71.2 121 42.1
CiPaw.06G141400 Carya illinoinensis HOM05D002914 ORTHO05D003196 8.0e-11 70.9 120 39.2
Glyma.02G134900 Glycine max HOM05D002914 ORTHO05D003196 8.0e-11 70.9 85 44.7
HanXRQChr16g0509571 Helianthus annuus HOM05D002914 ORTHO05D003196 8.0e-11 70.9 101 39.6
Sed0010504 Sechium edule HOM05D002914 ORTHO05D003196 8.0e-11 70.9 108 41.7
Oeu010582.1 Olea europaea HOM05D002914 ORTHO05D003196 1.4e-10 70.1 106 40.6
Ah.05g168910 Amaranthus hybridus HOM05D002914 ORTHO05D003196 1.8e-10 69.7 81 44.4
FAN20G0574 Fragaria x ananassa HOM05D002914 ORTHO05D003196 1.8e-10 69.7 120 41.7
Sabra04G0095900 Salix brachista HOM05D002914 ORTHO05D003196 3.0e-10 68.9 87 44.8
FvH4_2g06840 Fragaria vesca HOM05D002914 ORTHO05D003196 4.0e-10 68.6 120 40.8
Ca_18662_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 5.2e-10 68.2 109 38.5
FAN24G0092 Fragaria x ananassa HOM05D002914 ORTHO05D003196 5.2e-10 68.2 121 40.5
PSO675G1122 Papaver somniferum HOM05D000003 ORTHO05D001026 5.2e-10 68.2 54 55.6
Phvul.003G294100 Phaseolus vulgaris HOM05D002914 ORTHO05D003196 6.8e-10 67.8 126 38.1
Prupe.8G116500 Prunus persica HOM05D002914 ORTHO05D003196 6.8e-10 67.8 83 43.4
CSS0032433 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 8.8e-10 67.4 84 44.0
Oeu003693.1 Olea europaea HOM05D002914 ORTHO05D003196 8.8e-10 67.4 127 37.8
COL.COLO4_11718 Corchorus olitorius HOM05D002914 ORTHO05D003196 1.2e-09 67.0 86 40.7
Lsat_1_v5_gn_5_161660 Lactuca sativa HOM05D002914 ORTHO05D003196 1.2e-09 67.0 75 46.7
Lalb_Chr05g0219001 Lupinus albus HOM05D002914 ORTHO05D003196 1.2e-09 67.0 112 36.6
Thecc.02G096100 Theobroma cacao HOM05D002914 ORTHO05D003196 1.2e-09 67.0 124 37.1
Nitab4.5_0005892g0010 Nicotiana tabacum HOM05D002914 ORTHO05D003196 1.5e-09 66.6 78 46.2
Peaxi162Scf00493g00035 Petunia axillaris HOM05D002914 ORTHO05D003196 1.5e-09 66.6 80 47.5
FAN15G1103 Fragaria x ananassa HOM05D002914 ORTHO05D003196 2.0e-09 66.2 120 40.0
SalBow6G6648 Salvia bowleyana HOM05D002914 ORTHO05D003196 2.6e-09 65.9 83 43.4
PGR142G0527 Punica granatum HOM05D002914 ORTHO05D003196 4.4e-09 65.1 75 44.0
CSS0043526 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 5.7e-09 64.7 42 59.5
Ca_08467_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 5.7e-09 64.7 72 48.6
Prupe.7G063700 Prunus persica HOM05D002914 ORTHO05D003196 5.7e-09 64.7 95 38.9
Cpa.g.sc62.45 Carica papaya HOM05D002914 ORTHO05D003196 7.5e-09 64.3 113 40.7
Oeu000823.1 Olea europaea HOM05D002914 ORTHO05D003196 7.5e-09 64.3 92 40.2
Sabra09G0081200 Salix brachista HOM05D002914 ORTHO05D003196 7.5e-09 64.3 120 36.7
Gohir.A13G037800 Gossypium hirsutum HOM05D002914 ORTHO05D003196 9.8e-09 63.9 117 38.5
Manes.15G143200 Manihot esculenta HOM05D002914 ORTHO05D003196 9.8e-09 63.9 89 42.7
Phvul.001G135000 Phaseolus vulgaris HOM05D002914 ORTHO05D003196 1.3e-08 63.5 86 41.9
Lalb_Chr20g0110761 Lupinus albus HOM05D002914 ORTHO05D003196 1.7e-08 63.2 72 45.8
Sc08g0000120 Simmondsia chinensis HOM05D002914 ORTHO05D003196 1.7e-08 63.2 90 38.9
VMungo1383G1568 Vigna mungo HOM05D002914 ORTHO05D003196 1.7e-08 63.2 81 43.2
Gohir.D13G036200 Gossypium hirsutum HOM05D002914 ORTHO05D003196 2.2e-08 62.8 117 38.5
Medtr7g091830 Medicago truncatula HOM05D002914 ORTHO05D003196 2.2e-08 62.8 80 46.2
Dinv18053 Davidia involucrata HOM05D002914 ORTHO05D003196 2.8e-08 62.4 88 40.9
Oeu007255.1 Olea europaea HOM05D002914 ORTHO05D003196 2.8e-08 62.4 72 43.1
QL11p038331 Quercus lobata HOM05D002914 ORTHO05D003196 2.8e-08 62.4 71 45.1
Thecc.05G158000 Theobroma cacao HOM05D002914 ORTHO05D003196 2.8e-08 62.4 96 40.6
arahy.Tifrunner.gnm1.ann1.ZME7HS Arachis hypogaea HOM05D002914 ORTHO05D003196 3.7e-08 62.0 99 43.4
Duzib093G1261 Durio zibethinus HOM05D002914 ORTHO05D003196 3.7e-08 62.0 86 43.0
MD14G1070500 Malus domestica HOM05D002914 ORTHO05D003196 3.7e-08 62.0 90 41.1
Psat3g072240 Pisum sativum HOM05D002914 ORTHO05D003196 3.7e-08 62.0 79 45.6
TAR623G0040 Trochodendron aralioides HOM05D002914 ORTHO05D003196 3.7e-08 62.0 88 42.0
Atru.chr1.1072 Acer truncatum HOM05D002914 ORTHO05D003196 4.9e-08 61.6 81 42.0
arahy.Tifrunner.gnm1.ann1.2E3RSG Arachis hypogaea HOM05D002914 ORTHO05D003196 4.9e-08 61.6 135 35.6
Gorai.013G040900 Gossypium raimondii HOM05D002914 ORTHO05D003196 4.9e-08 61.6 86 41.9
TPR.G27766 Trifolium pratense HOM05D002914 ORTHO05D003196 4.9e-08 61.6 81 46.9
Ah.01g020080 Amaranthus hybridus HOM05D002914 ORTHO05D003196 6.3e-08 61.2 100 37.0
CANSAT80G1635 Cannabis sativa HOM05D002914 ORTHO05D003196 6.3e-08 61.2 77 44.2
Glyma.19G140500 Glycine max HOM05D002914 ORTHO05D003196 1.1e-07 60.5 79 43.0
Gohir.D02G212150 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.1e-07 60.5 122 38.5
Nn2g15303 Nelumbo nucifera HOM05D002914 ORTHO05D003196 1.4e-07 60.1 94 38.3
PSO170G6047 Papaver somniferum HOM05D002914 ORTHO05D003196 1.4e-07 60.1 95 44.2
unitig_699.g19875 Utricularia gibba HOM05D002914 ORTHO05D003196 1.8e-07 59.7 98 38.8
CSS0030933 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 2.4e-07 59.3 79 38.0
CSS0032479 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 2.4e-07 59.3 79 38.0
HPP92_007074 Vanilla planifolia HOM05D002914 ORTHO05D003196 2.4e-07 59.3 84 38.1
HPP92_003444 Vanilla planifolia HOM05D002914 ORTHO05D003196 3.1e-07 58.9 100 31.0
COL.COLO4_28237 Corchorus olitorius HOM05D002914 ORTHO05D003196 4.1e-07 58.5 75 41.3
Lj1g0015891 Lotus japonicus HOM05D002914 ORTHO05D003196 4.1e-07 58.5 87 37.9
Gohir.A09G123100 Gossypium hirsutum HOM05D002914 ORTHO05D003196 5.4e-07 58.2 91 38.5
Gorai.006G137500 Gossypium raimondii HOM05D002914 ORTHO05D003196 5.4e-07 58.2 91 38.5
Gohir.D09G120100 Gossypium hirsutum HOM05D002914 ORTHO05D003196 7.0e-07 57.8 91 38.5
EL10Ac3g07073 Beta vulgaris HOM05D002914 ORTHO05D003196 9.2e-07 57.4 72 43.1
RcHm_v2.0_Chr3g0481701 Rosa chinensis HOM05D002914 ORTHO05D003196 9.2e-07 57.4 84 40.5
COL.COLO4_26446 Corchorus olitorius HOM05D002914 ORTHO05D003196 1.2e-06 57.0 129 37.2
CiPaw.09G037100 Carya illinoinensis HOM05D002914 ORTHO05D003196 1.6e-06 56.6 91 37.4
Solyc04g015540.1 Solanum lycopersicum HOM05D002914 ORTHO05D003196 1.6e-06 56.6 88 40.9
Sopen04g007610 Solanum pennellii HOM05D002914 ORTHO05D003196 1.6e-06 56.6 88 40.9
Ah.04g151670 Amaranthus hybridus HOM05D002914 ORTHO05D003196 2.0e-06 56.2 69 42.0
QL07p000101 Quercus lobata HOM05D002914 ORTHO05D003196 2.0e-06 56.2 84 39.3
SEGI_00607 Sequoiadendron giganteum HOM05D002914 ORTHO05D003196 2.7e-06 55.8 46 56.5
THA.LOC104802149 Tarenaya hassleriana HOM05D002914 ORTHO05D003196 2.7e-06 55.8 79 44.3
TWI74G1608 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 2.7e-06 55.8 60 45.0
Manes.09G023600 Manihot esculenta HOM05D002914 ORTHO05D003196 3.5e-06 55.5 94 36.2
SGA_v2.0_scaffold105G30420 Striga asiatica HOM05D002914 ORTHO05D003196 3.5e-06 55.5 87 40.2
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 5.9e-06 54.7 80 42.5
BcaB02g08314 Brassica carinata HOM05D002914 ORTHO05D003196 5.9e-06 54.7 59 45.8
ClCG04G003270 Citrullus lanatus HOM05D002914 ORTHO05D003196 5.9e-06 54.7 78 38.5
MBI12_g22911_MAGBIO Magnolia biondii HOM05D002914 ORTHO05D003196 7.7e-06 54.3 62 41.9


User provided reference genes

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