Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p004953 Quercus lobata HOM05D000955 ORTHO05D001429 8.1e-48 193.4 94 100.0
QL02p005052 Quercus lobata HOM05D000955 ORTHO05D001429 8.1e-48 193.4 94 100.0
QL02p004948 Quercus lobata HOM05D000955 ORTHO05D001429 9.0e-31 136.7 82 78.0
CiPaw.15G059700 Carya illinoinensis HOM05D000955 ORTHO05D001429 3.4e-14 81.6 88 47.7
CiPaw.15G059600 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.9e-13 78.6 78 48.7
Cfa018538 Carpinus fangiana HOM05D000955 ORTHO05D001429 8.5e-13 77.0 88 44.3
CiPaw.15G059500 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.1e-12 76.6 83 48.2
Gohir.A05G261500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.1e-12 76.6 70 47.1
Gohir.A05G261600 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.1e-12 76.6 70 47.1
Gohir.D05G263600 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.1e-12 76.6 70 47.1
Gohir.D05G263800 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.1e-12 76.6 70 47.1
Gorai.009G275600 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.1e-12 76.6 70 47.1
CiPaw.15G059300 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.4e-12 76.3 83 44.6
Thecc.08G008900 Theobroma cacao HOM05D000955 ORTHO05D001429 1.4e-12 76.3 92 43.5
Cfa018539 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.5e-12 75.5 98 41.8
Cfa018541 Carpinus fangiana HOM05D000955 ORTHO05D001429 3.2e-12 75.1 89 42.7
CiPaw.15G059400 Carya illinoinensis HOM05D000955 ORTHO05D001429 4.2e-12 74.7 82 45.1
CiPaw.15G059200 Carya illinoinensis HOM05D000955 ORTHO05D001429 9.4e-12 73.6 79 45.6
CiPaw.15G059900 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.7e-11 72.0 78 46.2
CiPaw.15G060100 Carya illinoinensis HOM05D000955 ORTHO05D001429 3.6e-11 71.6 88 40.9
Thecc.04G032600 Theobroma cacao HOM05D000955 ORTHO05D001429 6.1e-11 70.9 76 46.1
Cfa018534 Carpinus fangiana HOM05D000955 ORTHO05D001429 1.0e-10 70.1 88 40.9
Thecc.04G032100 Theobroma cacao HOM05D000955 ORTHO05D001429 1.0e-10 70.1 76 43.4
QL02p005131 Quercus lobata HOM05D000955 ORTHO05D001429 1.8e-10 69.3 79 44.3
Atru.chr13.685 Acer truncatum HOM05D000955 ORTHO05D001429 2.3e-10 68.9 91 41.8
CiPaw.15G059800 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.3e-10 68.9 77 41.6
Manes.05G172701 Manihot esculenta HOM05D000955 ORTHO05D001429 2.3e-10 68.9 84 39.3
COL.COLO4_08736 Corchorus olitorius HOM05D000955 ORTHO05D001429 3.0e-10 68.6 75 48.0
ECA246G1916 Erigeron canadensis HOM05D000955 ORTHO05D001429 3.0e-10 68.6 76 44.7
FvH4_2g34530 Fragaria vesca HOM05D000955 ORTHO05D001429 3.0e-10 68.6 91 37.4
Manes.05G172901 Manihot esculenta HOM05D000955 ORTHO05D001429 3.0e-10 68.6 84 38.1
Atru.chr13.673 Acer truncatum HOM05D000955 ORTHO05D001429 3.9e-10 68.2 84 44.0
Cfa018540 Carpinus fangiana HOM05D000955 ORTHO05D001429 3.9e-10 68.2 87 43.7
CiPaw.15G060000 Carya illinoinensis HOM05D000955 ORTHO05D001429 3.9e-10 68.2 84 41.7
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 3.9e-10 68.2 76 44.7
CAN.G371.26 Capsicum annuum HOM05D000955 ORTHO05D001429 6.7e-10 67.4 77 44.2
COL.COLO4_08734 Corchorus olitorius HOM05D000955 ORTHO05D001429 8.8e-10 67.0 79 41.8
Duzib116G0476 Durio zibethinus HOM05D000955 ORTHO05D001429 8.8e-10 67.0 87 41.4
Thecc.08G009000 Theobroma cacao HOM05D000955 ORTHO05D001429 8.8e-10 67.0 88 39.8
CAN.G705.3 Capsicum annuum HOM05D000955 ORTHO05D001429 1.1e-09 66.6 88 42.0
Haze_17535 Corylus avellana HOM05D000955 ORTHO05D001429 1.1e-09 66.6 93 39.8
Nitab4.5_0000686g0110 Nicotiana tabacum HOM05D000955 ORTHO05D003340 1.5e-09 66.2 75 46.7
QL02p005194 Quercus lobata HOM05D000955 ORTHO05D001429 1.5e-09 66.2 81 42.0
CAN.G1938.3 Capsicum annuum HOM05D000955 ORTHO05D001429 2.0e-09 65.9 88 42.0
Cfa018533 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.5e-09 65.5 83 45.8
Nitab4.5_0001101g0050 Nicotiana tabacum HOM05D000955 ORTHO05D001429 3.3e-09 65.1 80 43.8
Thecc.08G009300 Theobroma cacao HOM05D000955 ORTHO05D001429 3.3e-09 65.1 78 42.3
QL02p005175 Quercus lobata HOM05D000955 ORTHO05D001429 4.3e-09 64.7 79 43.0
QL02p005180 Quercus lobata HOM05D000955 ORTHO05D001429 4.3e-09 64.7 93 39.8
QL02p005092 Quercus lobata HOM05D000955 ORTHO05D001429 5.7e-09 64.3 69 43.5
FAN27G1403 Fragaria x ananassa HOM05D000955 ORTHO05D001429 7.4e-09 63.9 78 39.7
Gohir.A05G261550 Gossypium hirsutum HOM05D000955 ORTHO05D001429 7.4e-09 63.9 86 44.2
Gohir.D05G263700 Gossypium hirsutum HOM05D000955 ORTHO05D001429 7.4e-09 63.9 86 44.2
Gorai.009G275500 Gossypium raimondii HOM05D000955 ORTHO05D001429 7.4e-09 63.9 86 44.2
CAN.G445.5 Capsicum annuum HOM05D000955 ORTHO05D001429 9.7e-09 63.5 81 45.7
COL.COLO4_17164 Corchorus olitorius HOM05D000955 ORTHO05D001429 9.7e-09 63.5 75 44.0
PGSC0003DMG400023125 Solanum tuberosum HOM05D000955 ORTHO05D001429 9.7e-09 63.5 80 43.8
Thecc.08G009100 Theobroma cacao HOM05D000955 ORTHO05D001429 9.7e-09 63.5 82 40.2
Gohir.A01G119200 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.3e-08 63.2 81 42.0
Thecc.04G031300 Theobroma cacao HOM05D000955 ORTHO05D001429 1.3e-08 63.2 76 42.1
Gohir.D01G107400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.7e-08 62.8 81 42.0
Gorai.002G131800 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.7e-08 62.8 81 42.0
Thecc.08G008600 Theobroma cacao HOM05D000955 ORTHO05D001429 1.7e-08 62.8 87 41.4
Nitab4.5_0002501g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.2e-08 62.4 80 45.0
Potri.008G079132 Populus trichocarpa HOM05D000955 ORTHO05D001429 2.2e-08 62.4 78 42.3
RcHm_v2.0_Chr6g0307631 Rosa chinensis HOM05D000955 ORTHO05D001429 2.2e-08 62.4 90 40.0
Gohir.A06G018101 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.8e-08 62.0 79 40.5
Lsat_1_v5_gn_6_113880 Lactuca sativa HOM05D000955 ORTHO05D001429 2.8e-08 62.0 86 38.4
Potri.002G126900 Populus trichocarpa HOM05D000955 ORTHO05D001429 3.7e-08 61.6 91 37.4
Prupe.1G436800 Prunus persica HOM05D000955 ORTHO05D001429 3.7e-08 61.6 83 39.8
Prupe.1G437000 Prunus persica HOM05D000955 ORTHO05D001429 3.7e-08 61.6 83 39.8
QL02p005085 Quercus lobata HOM05D000955 ORTHO05D001429 3.7e-08 61.6 78 43.6
COL.COLO4_26488 Corchorus olitorius HOM05D000955 ORTHO05D001429 4.8e-08 61.2 87 37.9
Duzib093G0375 Durio zibethinus HOM05D000955 ORTHO05D001429 4.8e-08 61.2 89 42.7
Gohir.D06G016300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 4.8e-08 61.2 83 42.2
Gorai.010G019200 Gossypium raimondii HOM05D000955 ORTHO05D001429 4.8e-08 61.2 83 42.2
Manes.05G172801 Manihot esculenta HOM05D000955 ORTHO05D001429 6.3e-08 60.8 79 36.7
Solyc04g079080.2 Solanum lycopersicum HOM05D000955 ORTHO05D003340 6.3e-08 60.8 80 41.2
Sopen04g032680 Solanum pennellii HOM05D000955 ORTHO05D001429 6.3e-08 60.8 80 41.2
Atru.chr13.682 Acer truncatum HOM05D000955 ORTHO05D001429 8.2e-08 60.5 85 41.2
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 8.2e-08 60.5 80 42.5
COL.COLO4_11400 Corchorus olitorius HOM05D000955 ORTHO05D003340 8.2e-08 60.5 75 36.0
COL.COLO4_26501 Corchorus olitorius HOM05D000955 ORTHO05D001429 8.2e-08 60.5 83 38.6
Manes.05G173000 Manihot esculenta HOM05D000955 ORTHO05D001429 8.2e-08 60.5 94 35.1
Potri.008G079066 Populus trichocarpa HOM05D000955 ORTHO05D001429 8.2e-08 60.5 77 41.6
Sopen07g012140 Solanum pennellii HOM05D000955 ORTHO05D001429 8.2e-08 60.5 80 42.5
Actinidia22623 Actinidia chinensis HOM05D000955 ORTHO05D001429 1.1e-07 60.1 73 39.7
COL.COLO4_26493 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.1e-07 60.1 82 39.0
FAN20G2975 Fragaria x ananassa HOM05D000955 ORTHO05D001429 1.1e-07 60.1 78 37.2
Cfa018537 Carpinus fangiana HOM05D000955 ORTHO05D001429 1.4e-07 59.7 81 39.5
COL.COLO4_26496 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.4e-07 59.7 72 44.4
Nitab4.5_0000686g0100 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.4e-07 59.7 83 41.0
Sed0019585 Sechium edule HOM05D000955 ORTHO05D001429 1.4e-07 59.7 77 39.0
Atru.chr13.681 Acer truncatum HOM05D000955 ORTHO05D001429 1.8e-07 59.3 74 44.6
Gohir.D02G091700 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.8e-07 59.3 83 38.6
Gorai.005G102800 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.8e-07 59.3 83 38.6
Sed0018620 Sechium edule HOM05D000955 ORTHO05D001429 1.8e-07 59.3 91 36.3
Atru.chr13.674 Acer truncatum HOM05D000955 ORTHO05D001429 2.4e-07 58.9 84 38.1
Gorai.010G019300 Gossypium raimondii HOM05D000955 ORTHO05D001429 2.4e-07 58.9 79 39.2
PGSC0003DMG400004460 Solanum tuberosum HOM05D000955 ORTHO05D001429 2.4e-07 58.9 83 41.0
PGSC0003DMG400015414 Solanum tuberosum HOM05D000955 ORTHO05D001429 2.4e-07 58.9 87 41.4
Atru.chr13.683 Acer truncatum HOM05D000955 ORTHO05D001429 3.1e-07 58.5 74 45.9
ClCG05G019810 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.1e-07 58.5 83 37.3
CsaV3_4G034250 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.1e-07 58.5 77 42.9
Manes.05G173400 Manihot esculenta HOM05D000955 ORTHO05D001429 3.1e-07 58.5 76 42.1
Nitab4.5_0001024g0060 Nicotiana tabacum HOM05D000955 ORTHO05D001429 3.1e-07 58.5 80 43.8
Peaxi162Scf00252g00112 Petunia axillaris HOM05D000955 ORTHO05D001429 3.1e-07 58.5 83 41.0
PGSC0003DMG400007984 Solanum tuberosum HOM05D000955 ORTHO05D001429 3.1e-07 58.5 79 41.8
EL10Ac1g00552 Beta vulgaris HOM05D000955 ORTHO05D001429 4.1e-07 58.2 76 42.1
CsaV3_4G034260 Cucumis sativus L. HOM05D000955 ORTHO05D001429 4.1e-07 58.2 87 36.8
Manes.04G102700 Manihot esculenta HOM05D000955 ORTHO05D001429 4.1e-07 58.2 83 37.3
Manes.18G036100 Manihot esculenta HOM05D000955 ORTHO05D001429 4.1e-07 58.2 83 41.0
Nitab4.5_0000686g0120 Nicotiana tabacum HOM05D000955 ORTHO05D001429 4.1e-07 58.2 84 40.5
Nitab4.5_0000686g0180 Nicotiana tabacum HOM05D000955 ORTHO05D001429 4.1e-07 58.2 84 40.5
Sed0006046 Sechium edule HOM05D000955 ORTHO05D001429 4.1e-07 58.2 87 35.6
Atru.chr13.677 Acer truncatum HOM05D000955 ORTHO05D001429 5.3e-07 57.8 80 41.2
Actinidia22622 Actinidia chinensis HOM05D000955 ORTHO05D001429 5.3e-07 57.8 87 39.1
AUR62014426 Chenopodium quinoa HOM05D000955 ORTHO05D001429 5.3e-07 57.8 76 43.4
AUR62034571 Chenopodium quinoa HOM05D000955 ORTHO05D001429 5.3e-07 57.8 76 43.4
RcHm_v2.0_Chr3g0490571 Rosa chinensis HOM05D000955 ORTHO05D001429 5.3e-07 57.8 86 37.2
Sopen12g030730 Solanum pennellii HOM05D000955 ORTHO05D001429 5.3e-07 57.8 83 39.8
MELO3C010863.2 Cucumis melo HOM05D000955 ORTHO05D001429 6.9e-07 57.4 84 40.5
Gohir.D06G016400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 6.9e-07 57.4 79 38.0
Sopen04g032660 Solanum pennellii HOM05D000955 ORTHO05D001429 6.9e-07 57.4 82 41.5
Thecc.08G008700 Theobroma cacao HOM05D000955 ORTHO05D001429 6.9e-07 57.4 79 40.5
Cfa017932 Carpinus fangiana HOM05D000955 ORTHO05D001429 9.1e-07 57.0 97 35.1
CsaV3_2G027970 Cucumis sativus L. HOM05D000955 ORTHO05D001429 9.1e-07 57.0 80 38.8
Dinv35967 Davidia involucrata HOM05D000955 ORTHO05D001429 9.1e-07 57.0 84 38.1
Prupe.1G436900 Prunus persica HOM05D000955 ORTHO05D001429 9.1e-07 57.0 80 33.8
Sed0022222 Sechium edule HOM05D000955 ORTHO05D001429 9.1e-07 57.0 77 40.3
Sed0026745 Sechium edule HOM05D000955 ORTHO05D001429 9.1e-07 57.0 77 41.6
Gohir.A06G018300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.2e-06 56.6 82 37.8
Peaxi162Scf00303g00141 Petunia axillaris HOM05D000955 ORTHO05D001429 1.2e-06 56.6 85 37.6
Prupe.1G437100 Prunus persica HOM05D000955 ORTHO05D001429 1.2e-06 56.6 80 33.8
Prupe.1G437200 Prunus persica HOM05D000955 ORTHO05D001429 1.2e-06 56.6 79 34.2
RcHm_v2.0_Chr6g0278331 Rosa chinensis HOM05D000955 ORTHO05D001429 1.2e-06 56.6 88 34.1
Sed0000195 Sechium edule HOM05D000955 ORTHO05D001429 1.2e-06 56.6 82 39.0
CiPaw.16G045300 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.5e-06 56.2 85 37.6
MELO3C016745.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.5e-06 56.2 77 40.3
Nitab4.5_0002468g0040 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.5e-06 56.2 86 37.2
RcHm_v2.0_Chr6g0307841 Rosa chinensis HOM05D000955 ORTHO05D001429 1.5e-06 56.2 94 35.1
COL.COLO4_26499 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.0e-06 55.8 81 40.7
Manes.04G102800 Manihot esculenta HOM05D000955 ORTHO05D001429 2.0e-06 55.8 83 33.7
Manes.05G173100 Manihot esculenta HOM05D000955 ORTHO05D001429 2.0e-06 55.8 86 33.7
Manes.05G173200 Manihot esculenta HOM05D000955 ORTHO05D001429 2.0e-06 55.8 79 39.2
Nitab4.5_0001101g0030 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.0e-06 55.8 83 38.6
Nitab4.5_0006068g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.0e-06 55.8 86 38.4
RcHm_v2.0_Chr6g0278301 Rosa chinensis HOM05D000955 ORTHO05D001429 2.0e-06 55.8 88 35.2
Atru.chr13.684 Acer truncatum HOM05D000955 ORTHO05D001429 2.6e-06 55.5 68 41.2
CAN.G371.22 Capsicum annuum HOM05D000955 ORTHO05D001429 2.6e-06 55.5 87 36.8
Haze_18217 Corylus avellana HOM05D000955 ORTHO05D001429 2.6e-06 55.5 93 36.6
Manes.04G102900 Manihot esculenta HOM05D000955 ORTHO05D001429 2.6e-06 55.5 83 33.7
Manes.05G172600 Manihot esculenta HOM05D000955 ORTHO05D001429 2.6e-06 55.5 85 28.2
Nitab4.5_0015075g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.6e-06 55.5 90 37.8
Os09g0458900 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 2.6e-06 55.5 83 32.5
Sed0019911 Sechium edule HOM05D000955 ORTHO05D001429 2.6e-06 55.5 77 39.0
CAN.G1518.8 Capsicum annuum HOM05D000955 ORTHO05D001429 3.4e-06 55.1 84 41.7
ClCG05G019800 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.4e-06 55.1 77 40.3
Gohir.D06G016500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 3.4e-06 55.1 82 37.8
Gorai.010G019400 Gossypium raimondii HOM05D000955 ORTHO05D001429 3.4e-06 55.1 82 37.8
Atru.chr13.660 Acer truncatum HOM05D000955 ORTHO05D001429 4.5e-06 54.7 83 34.9
Atru.chr3.343 Acer truncatum HOM05D000955 ORTHO05D003340 4.5e-06 54.7 72 34.7
CiPaw.16G045200 Carya illinoinensis HOM05D000955 ORTHO05D001429 4.5e-06 54.7 77 39.0
Manes.04G102000 Manihot esculenta HOM05D000955 ORTHO05D001429 4.5e-06 54.7 79 35.4
Manes.04G103100 Manihot esculenta HOM05D000955 ORTHO05D001429 4.5e-06 54.7 87 33.3
QL02p005158 Quercus lobata HOM05D000955 ORTHO05D001429 4.5e-06 54.7 77 37.7
Manes.04G103000 Manihot esculenta HOM05D000955 ORTHO05D001429 5.9e-06 54.3 87 33.3
Sed0010424 Sechium edule HOM05D000955 ORTHO05D001429 5.9e-06 54.3 77 37.7
Sc15g0003430 Simmondsia chinensis HOM05D000955 ORTHO05D001429 5.9e-06 54.3 86 34.9
Zm00001eb100840 Zea mays HOM05D000955 ORTHO05D003340 5.9e-06 54.3 83 31.3
Atru.chr13.679 Acer truncatum HOM05D000955 ORTHO05D001429 7.7e-06 53.9 73 39.7
CAN.G371.25 Capsicum annuum HOM05D000955 ORTHO05D001429 7.7e-06 53.9 83 38.6
Cfa018535 Carpinus fangiana HOM05D000955 ORTHO05D001429 7.7e-06 53.9 94 36.2
ClCG08G015850 Citrullus lanatus HOM05D000955 ORTHO05D001429 7.7e-06 53.9 81 37.0
MELO3C010876.2 Cucumis melo HOM05D000955 ORTHO05D001429 7.7e-06 53.9 80 40.0
Dinv29919 Davidia involucrata HOM05D000955 ORTHO05D001429 7.7e-06 53.9 77 39.0


User provided reference genes

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