Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p002913 Quercus lobata HOM05D004532 ORTHO05D000028 1.7e-47 192.2 90 100.0
Haze_18093 Corylus avellana HOM05D004532 ORTHO05D000028 8.6e-31 136.7 92 73.9
Cfa018031 Carpinus fangiana HOM05D004532 ORTHO05D000028 5.6e-30 134.0 94 74.5
GSVIVG01009393001 Vitis vinifera HOM05D001837 ORTHO05D000028 5.6e-30 134.0 88 71.6
COL.COLO4_28564 Corchorus olitorius HOM05D000021 ORTHO05D000028 8.1e-29 130.2 92 64.1
Duzib116G0629 Durio zibethinus HOM05D004532 ORTHO05D000028 1.2e-27 126.3 92 66.3
Actinidia38089 Actinidia chinensis HOM05D000042 ORTHO05D000028 4.4e-27 124.4 91 64.8
Manes.18G043300 Manihot esculenta HOM05D000042 ORTHO05D000028 5.8e-27 124.0 91 65.9
Ciclev10001730m.g Citrus clementina HOM05D001837 ORTHO05D000028 1.3e-26 122.9 91 64.8
Thecc.08G094200 Theobroma cacao HOM05D004532 ORTHO05D000028 2.2e-26 122.1 92 63.0
TAR625G1000 Trochodendron aralioides HOM05D001837 ORTHO05D000028 2.2e-26 122.1 90 63.3
Hma1.2p1_0923F.1_g237150 Hydrangea macrophylla HOM05D000042 ORTHO05D000028 6.4e-26 120.6 91 63.7
CiPaw.15G048700 Carya illinoinensis HOM05D000042 ORTHO05D000028 3.2e-25 118.2 97 64.9
MSTRG.1048 Avicennia marina HOM05D000042 ORTHO05D000028 1.3e-23 112.8 90 60.0
Migut.C00517 Erythranthe guttata HOM05D000042 ORTHO05D000028 4.3e-22 107.8 90 57.8
Oeu040891.2 Olea europaea HOM05D000042 ORTHO05D000028 5.6e-22 107.5 88 60.2
Oeu061838.1 Olea europaea HOM05D000042 ORTHO05D000028 1.2e-21 106.3 90 57.8
Dinv35909 Davidia involucrata HOM05D001837 ORTHO05D000028 3.6e-21 104.8 92 59.8
Prupe.1G427500 Prunus persica HOM05D000042 ORTHO05D000028 5.2e-20 100.9 99 56.6
Gohir.D02G089900 Gossypium hirsutum HOM05D000042 ORTHO05D000028 2.9e-18 95.1 87 56.3
Potri.014G021000 Populus trichocarpa HOM05D004532 ORTHO05D000028 3.8e-18 94.7 84 61.9
Gorai.005G100600 Gossypium raimondii HOM05D000042 ORTHO05D000028 8.4e-18 93.6 87 56.3
Gorai.009G216900 Gossypium raimondii HOM05D000042 ORTHO05D000028 8.4e-18 93.6 83 55.4
Gohir.D05G210450 Gossypium hirsutum HOM05D004532 ORTHO05D000028 1.1e-17 93.2 83 55.4
Lj4A761T86 Lonicera japonica HOM05D004532 ORTHO05D000028 2.4e-17 92.0 110 46.4
SGA_v2.0_scaffold26G11297 Striga asiatica HOM05D000042 ORTHO05D000028 3.9e-15 84.7 92 51.1
Lsat_1_v5_gn_6_109820 Lactuca sativa HOM05D001837 ORTHO05D000028 5.1e-15 84.3 93 45.2
CSS0035363 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 1.2e-13 79.7 99 48.5
CSS0046201 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 2.1e-13 79.0 116 46.6
HanXRQChr15g0483111 Helianthus annuus HOM05D001837 ORTHO05D000028 3.6e-13 78.2 89 41.6
CAN.G1054.7 Capsicum annuum HOM05D000042 ORTHO05D000028 3.1e-12 75.1 94 45.7
Gohir.A05G207000 Gossypium hirsutum HOM05D000042 ORTHO05D000028 6.9e-12 73.9 83 45.8
Peaxi162Scf00848g00319 Petunia axillaris HOM05D004532 ORTHO05D000028 6.9e-12 73.9 92 43.5
Sopen04g031890 Solanum pennellii HOM05D000042 ORTHO05D000028 9.0e-12 73.6 92 45.7
Nitab4.5_0000934g0190 Nicotiana tabacum HOM05D000042 ORTHO05D000028 1.5e-11 72.8 96 45.8
Nitab4.5_0007275g0010 Nicotiana tabacum HOM05D000042 ORTHO05D000028 2.6e-11 72.0 94 45.7
Solyc04g078300.3 Solanum lycopersicum HOM05D000042 ORTHO05D000028 2.6e-11 72.0 92 44.6
PGSC0003DMG400021518 Solanum tuberosum HOM05D004532 ORTHO05D000028 3.4e-11 71.6 92 44.6
HanXRQChr05g0150571 Helianthus annuus HOM05D001837 ORTHO05D000028 5.8e-11 70.9 93 40.9
ECA246G0663 Erigeron canadensis HOM05D000086 ORTHO05D002912 1.3e-10 69.7 89 41.6
Cc10_g05320 Coffea canephora HOM05D001837 ORTHO05D000028 5.4e-09 64.3 104 40.4
RcHm_v2.0_Chr6g0295381 Rosa chinensis HOM05D068235 ORTHO05D046661 1.2e-08 63.2 94 42.6
arahy.Tifrunner.gnm1.ann1.L0LNYC Arachis hypogaea HOM05D000042 ORTHO05D000028 7.8e-08 60.5 90 38.9
DCAR_008840 Daucus carota HOM05D042413 ORTHO05D000028 7.8e-08 60.5 118 39.8
arahy.Tifrunner.gnm1.ann1.E90NZE Arachis hypogaea HOM05D000042 ORTHO05D000028 1.3e-07 59.7 90 37.8
Glyma.04G043800 Glycine max HOM05D000042 ORTHO05D000028 3.9e-07 58.2 95 38.9
arahy.Tifrunner.gnm1.ann1.TIWB5X Arachis hypogaea HOM05D000042 ORTHO05D000028 8.7e-07 57.0 94 37.2
Actinidia08265 Actinidia chinensis HOM05D001837 ORTHO05D000028 1.5e-06 56.2 40 60.0
TPR.G25555 Trifolium pratense HOM05D000042 ORTHO05D000028 5.6e-06 54.3 88 37.5


User provided reference genes

Program Settings