Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p001961 Quercus lobata HOM05D007587 ORTHO05D009657 3.2e-35 151.0 66 100.0
CiPaw.15G043500 Carya illinoinensis HOM05D007587 ORTHO05D009657 7.0e-22 106.7 66 72.7
CSS0045179 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 4.5e-21 104.0 67 65.7
CiPaw.15G043600 Carya illinoinensis HOM05D007587 ORTHO05D009657 4.5e-21 104.0 67 71.6
Cfa017911 Carpinus fangiana HOM05D007587 ORTHO05D009657 1.7e-20 102.1 66 66.7
Hma1.2p1_2651F.1_g326150 Hydrangea macrophylla HOM05D007587 ORTHO05D009657 1.7e-20 102.1 70 68.6
Manes.18G051550 Manihot esculenta HOM05D007587 ORTHO05D009657 1.2e-18 95.9 66 63.6
Potri.005G150300 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.2e-18 95.9 43 86.0
TAR381G0827 Trochodendron aralioides HOM05D007587 ORTHO05D009657 3.6e-18 94.4 66 66.7
GSVIVG01034787001 Vitis vinifera HOM05D007587 ORTHO05D009657 4.7e-18 94.0 63 66.7
Atru.chr13.897 Acer truncatum HOM05D007587 ORTHO05D009657 6.1e-18 93.6 69 60.9
CAN.G416.39 Capsicum annuum HOM05D007587 ORTHO05D009657 6.1e-18 93.6 75 58.7
MBI16_g05021_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 6.1e-18 93.6 68 61.8
Nitab4.5_0015343g0010 Nicotiana tabacum HOM05D007587 ORTHO05D009657 1.4e-17 92.4 60 65.0
Os03g0673700 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 1.8e-17 92.0 68 61.8
Thecc.08G082100 Theobroma cacao HOM05D007587 ORTHO05D009657 1.8e-17 92.0 66 68.2
SalBow7G1850 Salvia bowleyana HOM05D007587 ORTHO05D009657 3.0e-17 91.3 66 63.6
PGSC0003DMG400004952 Solanum tuberosum HOM05D007587 ORTHO05D009657 4.0e-17 90.9 74 56.8
vmacro04609 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 4.0e-17 90.9 70 57.1
Actinidia29637 Actinidia chinensis HOM05D007587 ORTHO05D009657 8.9e-17 89.7 75 53.3
COL.COLO4_35374 Corchorus olitorius HOM05D007587 ORTHO05D009657 8.9e-17 89.7 66 62.1
Nn5g27361 Nelumbo nucifera HOM05D007587 ORTHO05D009657 8.9e-17 89.7 67 58.2
vmacro04607 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 8.9e-17 89.7 70 54.3
Zm00001eb052110 Zea mays HOM05D007587 ORTHO05D009657 8.9e-17 89.7 66 57.6
Cc10_g07830 Coffea canephora HOM05D007587 ORTHO05D009657 1.2e-16 89.4 66 57.6
vmacro04608 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 1.5e-16 89.0 70 55.7
Medtr5g018610 Medicago truncatula HOM05D007587 ORTHO05D009657 2.0e-16 88.6 61 54.1
MBI16_g05020_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 3.4e-16 87.8 68 57.4
Nn5g27362 Nelumbo nucifera HOM05D007587 ORTHO05D009657 3.4e-16 87.8 66 56.1
Psat2g163680 Pisum sativum HOM05D007587 ORTHO05D009657 3.4e-16 87.8 61 55.7
CDE06G1347 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 4.4e-16 87.4 44 75.0
Rhsim07G0216100 Rhododendron simsii HOM05D007587 ORTHO05D009657 5.7e-16 87.0 45 73.3
Rhsim07G0216200 Rhododendron simsii HOM05D007587 ORTHO05D009657 5.7e-16 87.0 45 73.3
Migut.O00867 Erythranthe guttata HOM05D007587 ORTHO05D009657 9.8e-16 86.3 58 58.6
Gohir.A01G124700 Gossypium hirsutum HOM05D007587 ORTHO05D009657 9.8e-16 86.3 66 60.6
Gohir.D01G112300 Gossypium hirsutum HOM05D007587 ORTHO05D009657 9.8e-16 86.3 66 60.6
Gorai.002G137200 Gossypium raimondii HOM05D007587 ORTHO05D009657 9.8e-16 86.3 66 60.6
CDE04G0885 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 1.3e-15 85.9 44 75.0
Migut.C00432 Erythranthe guttata HOM05D007587 ORTHO05D009657 2.2e-15 85.1 58 56.9
Nn5g27360 Nelumbo nucifera HOM05D007587 ORTHO05D009657 8.3e-15 83.2 66 56.1
AagrBONN_evm.TU.Sc2ySwM_117.169 Anthoceros agrestis HOM05D007587 ORTHO05D009657 1.4e-14 82.4 44 68.2
Atru.chr3.473 Acer truncatum HOM05D007587 ORTHO05D009657 2.4e-14 81.6 59 59.3
Psat0s261g0120 Pisum sativum HOM05D007587 ORTHO05D009657 3.1e-14 81.3 61 50.8
Nn4g24320 Nelumbo nucifera HOM05D007587 ORTHO05D009657 4.1e-14 80.9 46 67.4
Os03g0673400 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 4.1e-14 80.9 43 72.1
QL06p044263 Quercus lobata HOM05D007587 ORTHO05D009657 4.1e-14 80.9 61 49.2
Dinv39924 Davidia involucrata HOM05D007587 ORTHO05D009657 1.6e-13 79.0 64 53.1
Mapoly0026s0006 Marchantia polymorpha HOM05D007587 ORTHO05D009657 2.0e-13 78.6 55 56.4
Zm00001eb135300 Zea mays HOM05D007587 ORTHO05D009657 2.7e-13 78.2 57 50.9
TPR.G29850 Trifolium pratense HOM05D007587 ORTHO05D009657 3.5e-13 77.8 43 60.5
Lj7C15T6 Lonicera japonica HOM05D007587 ORTHO05D009657 5.9e-13 77.0 66 48.5
Os12g0596101 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 1.0e-12 76.3 43 62.8
Phvul.003G249500 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 1.0e-12 76.3 43 62.8
Glyma.11G061100 Glycine max HOM05D007587 ORTHO05D009657 1.3e-12 75.9 61 50.8
Manes.13G132300 Manihot esculenta HOM05D007587 ORTHO05D009657 1.3e-12 75.9 60 46.7
Migut.H00502 Erythranthe guttata HOM05D007587 ORTHO05D009657 2.9e-12 74.7 65 41.5
Phvul.002G023800 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 2.9e-12 74.7 61 47.5
TAR381G1104 Trochodendron aralioides HOM05D007587 ORTHO05D009657 2.9e-12 74.7 43 58.1
Thecc.01G045600 Theobroma cacao HOM05D007587 ORTHO05D009657 3.9e-12 74.3 61 44.3
CSS0038445 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 5.0e-12 73.9 43 58.1
COL.COLO4_22178 Corchorus olitorius HOM05D007587 ORTHO05D009657 5.0e-12 73.9 61 42.6
Lj2g0021293 Lotus japonicus HOM05D007587 ORTHO05D009657 5.0e-12 73.9 61 47.5
Cc07_g05380 Coffea canephora HOM05D007587 ORTHO05D009657 6.6e-12 73.6 52 51.9
Prupe.7G145500 Prunus persica HOM05D007587 ORTHO05D009657 6.6e-12 73.6 43 55.8
Ciclev10027038m.g Citrus clementina HOM05D007587 ORTHO05D009657 8.6e-12 73.2 65 46.2
ECA238G1538 Erigeron canadensis HOM05D003002 ORTHO05D002276 8.6e-12 73.2 43 58.1
Glyma.16G143900 Glycine max HOM05D007587 ORTHO05D009657 8.6e-12 73.2 43 58.1
Gohir.A11G188150 Gossypium hirsutum HOM05D007587 ORTHO05D009657 8.6e-12 73.2 43 58.1
Gohir.D11G194650 Gossypium hirsutum HOM05D007587 ORTHO05D009657 8.6e-12 73.2 43 58.1
Gorai.007G208100 Gossypium raimondii HOM05D007587 ORTHO05D009657 8.6e-12 73.2 43 58.1
arahy.Tifrunner.gnm1.ann1.986LRW Arachis hypogaea HOM05D007587 ORTHO05D009657 1.1e-11 72.8 59 49.2
arahy.Tifrunner.gnm1.ann1.JQT6QK Arachis hypogaea HOM05D007587 ORTHO05D009657 1.1e-11 72.8 59 49.2
FAN23G2556 Fragaria x ananassa HOM05D007587 ORTHO05D009657 1.5e-11 72.4 43 53.5
FAN28G1310 Fragaria x ananassa HOM05D007587 ORTHO05D009657 1.5e-11 72.4 43 53.5
Cpa.g.sc15.59 Carica papaya HOM05D007587 ORTHO05D009657 1.9e-11 72.0 43 53.5
FAN26G0670 Fragaria x ananassa HOM05D007587 ORTHO05D009657 1.9e-11 72.0 43 53.5
Glyma.02G061500 Glycine max HOM05D007587 ORTHO05D009657 2.5e-11 71.6 43 58.1
Lsat_1_v5_gn_2_87241 Lactuca sativa HOM05D007587 ORTHO05D009657 2.5e-11 71.6 43 58.1
Potri.007G034000 Populus trichocarpa HOM05D007587 ORTHO05D009657 2.5e-11 71.6 52 48.1
CBR_g28808 Chara braunii HOM05D007587 ORTHO05D009657 5.6e-11 70.5 42 59.5
Glyma.19G074100 Glycine max HOM05D007587 ORTHO05D009657 5.6e-11 70.5 43 58.1
Lsat_1_v5_gn_3_93981 Lactuca sativa HOM05D007587 ORTHO05D009657 5.6e-11 70.5 43 55.8
Pp3c20_19960 Physcomitrium patens HOM05D007587 ORTHO05D009657 9.5e-11 69.7 66 43.9
Solyc02g090080.1 Solanum lycopersicum HOM05D007587 ORTHO05D009657 9.5e-11 69.7 43 55.8
ClCG02G013040 Citrullus lanatus HOM05D007587 ORTHO05D009657 3.6e-10 67.8 61 45.9
Manes.12G097400 Manihot esculenta HOM05D007587 ORTHO05D009657 3.6e-10 67.8 43 51.2
Potri.005G130750 Populus trichocarpa HOM05D007587 ORTHO05D009657 3.6e-10 67.8 54 44.4
SalBow1G8004 Salvia bowleyana HOM05D007587 ORTHO05D009657 3.6e-10 67.8 61 39.3
Nitab4.5_0005594g0030 Nicotiana tabacum HOM05D007587 ORTHO05D009657 4.7e-10 67.4 43 51.2
Sed0017528 Sechium edule HOM05D007587 ORTHO05D009657 6.1e-10 67.0 43 51.2
Pp3c24_89 Physcomitrium patens HOM05D007587 ORTHO05D009657 1.0e-09 66.2 46 56.5
CsaV3_2G017120 Cucumis sativus L. HOM05D007587 ORTHO05D009657 8.9e-09 63.2 59 44.1
Pp3c19_1061 Physcomitrium patens HOM05D007587 ORTHO05D009657 2.0e-08 62.0 47 55.3
Pp3c19_1062 Physcomitrium patens HOM05D007587 ORTHO05D009657 7.5e-08 60.1 44 54.5
Nn5g28989 Nelumbo nucifera HOM05D007587 ORTHO05D009657 1.1e-06 56.2 32 65.6


User provided reference genes

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