Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p001525 Quercus lobata HOM05D006661 ORTHO05D008369 1.5e-49 199.1 96 100.0
QL02p001540 Quercus lobata HOM05D006661 ORTHO05D008369 1.7e-40 169.1 89 91.0
Cfa017936 Carpinus fangiana HOM05D006661 ORTHO05D008369 1.8e-39 165.6 95 83.2
CiPaw.16G029900 Carya illinoinensis HOM05D006661 ORTHO05D008369 9.2e-39 163.3 95 82.1
Psat1g192360 Pisum sativum HOM05D006661 ORTHO05D008369 2.7e-38 161.8 95 78.9
Ciclev10009515m.g Citrus clementina HOM05D006661 ORTHO05D008369 4.5e-38 161.0 95 80.0
Glyma.13G222200 Glycine max HOM05D006661 ORTHO05D008369 4.5e-38 161.0 95 77.9
Peaxi162Scf00436g00823 Petunia axillaris HOM05D006661 ORTHO05D008369 4.5e-38 161.0 95 77.9
Hma1.2p1_2451F.1_g322380 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 7.8e-38 160.2 95 76.8
Medtr2g018310 Medicago truncatula HOM05D006661 ORTHO05D008369 1.7e-37 159.1 94 78.7
TPR.G20633 Trifolium pratense HOM05D006661 ORTHO05D008369 1.7e-37 159.1 95 76.8
arahy.Tifrunner.gnm1.ann1.KA607S Arachis hypogaea HOM05D006661 ORTHO05D008369 2.3e-37 158.7 95 75.8
Cc08_g10380 Coffea canephora HOM05D006661 ORTHO05D008369 2.9e-37 158.3 95 80.0
arahy.Tifrunner.gnm1.ann1.R5Q5WD Arachis hypogaea HOM05D006661 ORTHO05D008369 5.0e-37 157.5 95 74.7
Ca_00502_v3 Cicer arietinum L. HOM05D006661 ORTHO05D008369 5.0e-37 157.5 94 77.7
CAN.G6.20 Capsicum annuum HOM05D006661 ORTHO05D008369 6.6e-37 157.1 95 73.7
Duzib187G1697 Durio zibethinus HOM05D006661 ORTHO05D008369 6.6e-37 157.1 89 82.0
Sed0008959 Sechium edule HOM05D006661 ORTHO05D008369 8.6e-37 156.8 95 75.8
ClCG08G016930 Citrullus lanatus HOM05D006661 ORTHO05D008369 1.1e-36 156.4 95 75.8
Nn6g35396 Nelumbo nucifera HOM05D006661 ORTHO05D008369 1.1e-36 156.4 95 75.8
MSTRG.11669 Avicennia marina HOM05D006661 ORTHO05D008369 1.9e-36 155.6 95 75.8
PGR031G2394 Punica granatum HOM05D006661 ORTHO05D008369 1.9e-36 155.6 95 74.7
Gohir.D06G089000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 2.5e-36 155.2 95 75.8
TWI34G0500 Tripterygium wilfordii HOM05D006661 ORTHO05D008369 2.5e-36 155.2 95 76.8
GSVIVG01035347001 Vitis vinifera HOM05D006661 ORTHO05D008369 3.3e-36 154.8 95 74.7
SalBow4G0568 Salvia bowleyana HOM05D006661 ORTHO05D008369 4.3e-36 154.5 95 73.7
CSS0024744 Camellia sinensis var. sinensis HOM05D006661 ORTHO05D008369 5.6e-36 154.1 95 73.7
Migut.A00149 Erythranthe guttata HOM05D006661 ORTHO05D008369 7.3e-36 153.7 89 79.8
Gohir.A06G090000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 7.3e-36 153.7 95 74.7
Lalb_Chr18g0055101 Lupinus albus HOM05D006661 ORTHO05D008369 7.3e-36 153.7 93 75.3
Phvul.006G168200 Phaseolus vulgaris HOM05D006661 ORTHO05D008369 7.3e-36 153.7 95 73.7
Eucgr.H03073 Eucalyptus grandis HOM05D006661 ORTHO05D008369 9.5e-36 153.3 95 73.7
Sopen08g019360 Solanum pennellii HOM05D006661 ORTHO05D008369 9.5e-36 153.3 95 72.6
SGA_v2.0_scaffold88G27220 Striga asiatica HOM05D006661 ORTHO05D008369 9.5e-36 153.3 95 75.8
Atru.chr7.2017 Acer truncatum HOM05D006661 ORTHO05D008369 1.6e-35 152.5 89 78.7
CsaV3_2G025680 Cucumis sativus L. HOM05D006661 ORTHO05D008369 1.6e-35 152.5 95 73.7
Lj4g0006609 Lotus japonicus HOM05D006661 ORTHO05D008369 1.6e-35 152.5 94 74.5
Potri.018G056100 Populus trichocarpa HOM05D006661 ORTHO05D008369 1.6e-35 152.5 95 74.7
Thecc.09G051500 Theobroma cacao HOM05D006661 ORTHO05D008369 1.6e-35 152.5 89 79.8
PSO063G2325 Papaver somniferum HOM05D006661 ORTHO05D008369 2.8e-35 151.8 88 77.3
Solyc08g065640.3 Solanum lycopersicum HOM05D006661 ORTHO05D008369 2.8e-35 151.8 95 71.6
PGSC0003DMG400002199 Solanum tuberosum HOM05D006661 ORTHO05D008369 2.8e-35 151.8 95 71.6
Aa31LG5G9740 Aethionema arabicum HOM05D006661 ORTHO05D008369 3.6e-35 151.4 93 75.3
Gorai.010G102800 Gossypium raimondii HOM05D006661 ORTHO05D008369 3.6e-35 151.4 95 75.8
Sabra06G0181100 Salix brachista HOM05D006661 ORTHO05D008369 3.6e-35 151.4 95 73.7
Hund03354 Selenicereus undatus HOM05D006661 ORTHO05D008369 3.6e-35 151.4 95 71.6
AUR62022048 Chenopodium quinoa HOM05D006661 ORTHO05D008369 6.1e-35 150.6 94 72.3
Oeu036347.1 Olea europaea HOM05D006661 ORTHO05D008369 6.1e-35 150.6 95 74.7
Rhsim11G0046400 Rhododendron simsii HOM05D006661 ORTHO05D008369 6.1e-35 150.6 95 71.6
HanXRQChr09g0251201 Helianthus annuus HOM05D006661 ORTHO05D008369 8.0e-35 150.2 95 70.5
Nitab4.5_0000359g0060 Nicotiana tabacum HOM05D006661 ORTHO05D008369 8.0e-35 150.2 95 72.6
Aqoxy7G01325 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 1.4e-34 149.4 95 70.5
CANSAT25G2346 Cannabis sativa HOM05D006661 ORTHO05D008369 1.4e-34 149.4 95 71.6
AUR62009178 Chenopodium quinoa HOM05D006661 ORTHO05D008369 1.4e-34 149.4 94 71.3
Lsat_1_v5_gn_6_13140 Lactuca sativa HOM05D006661 ORTHO05D008369 1.4e-34 149.4 95 70.5
Os01g0559000 Oryza sativa ssp. japonica HOM05D006661 ORTHO05D008369 1.4e-34 149.4 95 71.6
TAR383G0029 Trochodendron aralioides HOM05D006661 ORTHO05D008369 1.4e-34 149.4 89 77.5
Sp4g05860 Schrenkiella parvula HOM05D006661 ORTHO05D008369 1.8e-34 149.1 95 71.6
VMungo0540G1431 Vigna mungo HOM05D006661 ORTHO05D008369 1.8e-34 149.1 95 70.5
Nitab4.5_0001179g0020 Nicotiana tabacum HOM05D006661 ORTHO05D008369 4.0e-34 147.9 95 74.7
Actinidia01201 Actinidia chinensis HOM05D006661 ORTHO05D008369 5.2e-34 147.5 94 69.1
ECA233G6145 Erigeron canadensis HOM05D006661 ORTHO05D008369 5.2e-34 147.5 95 68.4
AL4G18030 Arabidopsis lyrata HOM05D006661 ORTHO05D008369 1.2e-33 146.4 95 71.6
BcaB06g29613 Brassica carinata HOM05D006661 ORTHO05D008369 1.2e-33 146.4 95 71.6
BcaC02g08315 Brassica carinata HOM05D006661 ORTHO05D008369 1.2e-33 146.4 95 71.6
C04p55870 Brassica napus HOM05D006661 ORTHO05D008369 1.2e-33 146.4 95 71.6
BolC4t27119H Brassica oleracea HOM05D006661 ORTHO05D008369 1.2e-33 146.4 95 71.6
Thhalv10002098m.g Eutrema salsugineum HOM05D006661 ORTHO05D008369 1.2e-33 146.4 95 71.6
unitig_748.g7518 Utricularia gibba HOM05D006661 ORTHO05D008369 1.2e-33 146.4 94 71.3
PSO832G3146 Papaver somniferum HOM05D006661 ORTHO05D008369 1.5e-33 146.0 88 73.9
Carub.0004s0581 Capsella rubella HOM05D006661 ORTHO05D008369 2.0e-33 145.6 93 71.0
Haze_18212 Corylus avellana HOM05D006661 ORTHO05D008369 5.8e-33 144.1 82 82.9
EL10Ac2g03924 Beta vulgaris HOM05D006661 ORTHO05D008369 7.5e-33 143.7 102 67.6
CARHR287330 Cardamine hirsuta HOM05D006661 ORTHO05D008369 7.5e-33 143.7 93 71.0
Zm00001eb162230 Zea mays HOM05D006661 ORTHO05D008369 9.8e-33 143.3 95 68.4
FAN15G2916 Fragaria x ananassa HOM05D006661 ORTHO05D008369 1.3e-32 142.9 89 75.3
FAN20G2753 Fragaria x ananassa HOM05D006661 ORTHO05D008369 1.3e-32 142.9 89 75.3
Prupe.1G414600 Prunus persica HOM05D006661 ORTHO05D008369 1.3e-32 142.9 89 75.3
ATR0789G168 Amborella trichopoda HOM05D006661 ORTHO05D008369 1.7e-32 142.5 88 72.7
Hma1.2p1_0450F.1_g155690 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 2.9e-32 141.7 82 78.0
RcHm_v2.0_Chr6g0310531 Rosa chinensis HOM05D006661 ORTHO05D008369 2.9e-32 141.7 89 75.3
FvH4_2g32150 Fragaria vesca HOM05D006661 ORTHO05D008369 3.7e-32 141.4 89 73.0
FAN24G0958 Fragaria x ananassa HOM05D006661 ORTHO05D008369 3.7e-32 141.4 89 73.0
MD08G1044700 Malus domestica HOM05D006661 ORTHO05D008369 3.7e-32 141.4 89 74.2
Manes.16G078200 Manihot esculenta HOM05D006661 ORTHO05D008369 3.7e-32 141.4 86 75.6
Lj8A552G6 Lonicera japonica HOM05D006661 ORTHO05D008369 3.2e-31 138.3 82 79.3
THA.LOC104803733 Tarenaya hassleriana HOM05D006661 ORTHO05D008369 4.1e-31 137.9 88 70.5
Duzib168G0126 Durio zibethinus HOM05D000575 ORTHO05D008369 5.4e-31 137.5 82 78.0
vmacro00160 Vaccinium macrocarpon HOM05D006661 ORTHO05D008369 9.2e-31 136.7 82 75.6
HPP92_005507 Vanilla planifolia HOM05D006661 ORTHO05D008369 9.2e-31 136.7 89 68.5
MELO3C030341.2 Cucumis melo HOM05D006661 ORTHO05D008369 2.7e-30 135.2 81 75.3
SEGI_00170 Sequoiadendron giganteum HOM05D006661 ORTHO05D008369 4.6e-30 134.4 88 69.3
AT2G25950 Arabidopsis thaliana HOM05D006661 ORTHO05D008369 1.0e-29 133.3 82 75.6
A04p20170 Brassica napus HOM05D006661 ORTHO05D008369 1.0e-29 133.3 82 75.6
BraA04t17597Z Brassica rapa HOM05D006661 ORTHO05D008369 1.0e-29 133.3 82 75.6
CDE07G0448 Ceratophyllum demersum HOM05D006661 ORTHO05D008369 1.0e-29 133.3 95 64.2
Cpa.g.sc7.195 Carica papaya HOM05D006661 ORTHO05D008369 2.3e-29 132.1 82 74.4
CANSAT25G1095 Cannabis sativa HOM05D006661 ORTHO05D008369 5.0e-29 131.0 82 74.4
DCAR_003069 Daucus carota HOM05D006661 ORTHO05D008369 5.0e-29 131.0 81 71.6
CANSAT78G0664 Cannabis sativa HOM05D006661 ORTHO05D008369 6.6e-29 130.6 82 73.2
FAN27G1843 Fragaria x ananassa HOM05D006661 ORTHO05D008369 5.6e-28 127.5 75 77.3
Aqoxy6G02410 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 6.2e-27 124.0 95 63.2
Pp3c22_18330 Physcomitrium patens HOM05D006661 ORTHO05D008369 1.8e-26 122.5 82 62.2
AagrBONN_evm.TU.Sc2ySwM_362.2052 Anthoceros agrestis HOM05D006661 ORTHO05D008369 3.7e-24 114.8 82 62.2
CBR_g22258 Chara braunii HOM05D006661 ORTHO05D008369 6.4e-24 114.0 82 61.0
SMO169G0297 Selaginella moellendorffii HOM05D006661 ORTHO05D008369 5.4e-23 110.9 76 64.5
MCO14G523 Micromonas commoda HOM05D006661 ORTHO05D008369 3.2e-15 85.1 76 50.0
PRCOL_00000611 Prasinoderma coloniale HOM05D006661 ORTHO05D008369 8.1e-11 70.5 78 46.2
Cre02.g110450 Chlamydomonas reinhardtii HOM05D006661 ORTHO05D008369 6.0e-06 54.3 77 39.0


User provided reference genes

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