Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 6.6e-287 989.9 482 100.0
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 3.2e-257 891.3 482 89.4
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 6.7e-255 883.6 482 88.6
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 1.6e-253 879.0 482 88.0
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 6.3e-245 850.5 482 85.7
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.8e-244 849.0 482 85.5
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 9.0e-244 846.7 482 85.1
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 9.0e-244 846.7 482 84.4
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 2.6e-243 845.1 482 85.5
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 3.4e-243 844.7 482 84.4
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.4e-241 839.3 482 84.2
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.9e-241 839.0 482 84.2
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.2e-241 837.8 482 84.2
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 9.4e-241 836.6 482 83.6
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 9.4e-241 836.6 482 84.6
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 1.6e-240 835.9 482 83.4
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 3.6e-240 834.7 482 83.8
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.6e-240 834.3 482 83.6
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 4.6e-240 834.3 482 83.4
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.0e-239 833.2 482 82.8
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 1.4e-239 832.8 481 83.4
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 3.3e-238 828.2 484 82.9
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 2.2e-237 825.5 483 82.6
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 8.2e-237 823.5 482 83.2
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 4.1e-236 821.2 482 82.2
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 4.1e-236 821.2 482 81.7
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 5.3e-236 820.8 482 81.7
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 4.5e-235 817.8 482 82.4
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 7.7e-235 817.0 482 80.7
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 2.9e-234 815.1 483 82.8
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 2.9e-234 815.1 483 82.6
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 8.5e-234 813.5 482 82.8
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 1.9e-233 812.4 483 82.4
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.6e-232 809.3 482 82.4
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 2.7e-232 808.5 483 80.3
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 2.7e-232 808.5 513 78.2
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 7.9e-232 807.0 483 81.6
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 1.8e-228 795.8 482 79.9
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 7.0e-228 793.9 482 79.7
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 1.2e-227 793.1 482 79.0
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 4.5e-227 791.2 488 78.5
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 4.5e-227 791.2 482 79.9
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 4.5e-227 791.2 481 80.2
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 5.9e-227 790.8 482 80.1
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 5.9e-227 790.8 482 80.1
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 5.9e-227 790.8 488 78.3
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.0e-226 790.0 482 79.0
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.2e-226 788.9 482 79.7
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 3.8e-226 788.1 482 79.5
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 3.8e-226 788.1 482 81.3
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 8.5e-226 786.9 482 79.5
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 2.5e-225 785.4 483 80.1
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 5.5e-225 784.3 481 80.2
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.6e-224 782.7 482 79.3
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 1.6e-224 782.7 483 79.3
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 1.6e-224 782.7 482 78.8
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 2.7e-224 781.9 482 79.5
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 2.7e-224 781.9 482 79.0
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 4.7e-224 781.2 484 79.3
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 6.1e-224 780.8 483 78.3
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 8.0e-224 780.4 483 78.5
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 3.9e-223 778.1 484 78.5
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 8.8e-223 776.9 481 78.6
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 8.8e-223 776.9 482 78.4
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 1.1e-222 776.5 486 79.6
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 2.0e-222 775.8 483 78.1
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 2.6e-222 775.4 484 79.5
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 3.3e-222 775.0 482 78.0
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 2.8e-221 771.9 482 77.6
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 3.7e-221 771.5 482 78.0
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 3.7e-221 771.5 483 78.9
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 1.4e-220 769.6 484 77.5
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 5.3e-220 767.7 483 77.8
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 2.2e-218 762.3 482 77.6
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 6.5e-218 760.8 485 78.1
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 1.5e-217 759.6 483 77.2
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 1.5e-217 759.6 482 76.3
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 3.2e-217 758.4 485 77.3
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 7.2e-217 757.3 483 77.6
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 1.2e-216 756.5 484 77.1
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.6e-216 756.1 483 77.0
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 2.7e-216 755.4 484 78.1
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 1.8e-215 752.7 482 77.4
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.3e-215 752.3 483 76.8
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 1.2e-214 750.0 416 86.3
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 7.5e-214 747.3 483 76.8
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 1.3e-213 746.5 482 77.0
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.7e-210 736.1 486 75.7
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.7e-210 736.1 486 75.7
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 2.2e-210 735.7 482 75.5
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 3.0e-207 725.3 486 75.3
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 6.8e-207 724.2 486 75.3
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 9.8e-206 720.3 483 74.3
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 1.3e-205 719.9 393 86.8
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 3.7e-205 718.4 485 74.8
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 4.8e-205 718.0 395 86.1
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 1.8e-204 716.1 485 74.4
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 9.1e-204 713.8 487 74.3
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 7.5e-198 694.1 418 80.4
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 7.8e-195 684.1 446 76.5
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 2.3e-191 672.5 383 84.3
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.5e-190 669.8 492 67.1
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 3.4e-190 668.7 406 77.6
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 3.4e-190 668.7 420 75.7
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 1.4e-188 663.3 486 70.8
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 1.6e-187 659.8 443 72.9
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 1.7e-186 656.4 389 78.1
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 2.6e-174 615.9 392 74.2
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.4e-167 592.8 431 69.8
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 3.1e-167 592.4 388 70.4
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 8.4e-165 584.3 480 64.4
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 1.6e-160 570.1 393 65.4
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 1.3e-154 550.4 288 91.3
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 8.7e-154 547.7 288 91.0
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 4.9e-141 505.4 343 73.2
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 2.4e-135 486.5 285 79.6
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 7.7e-102 375.2 271 69.4
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.6e-99 367.5 237 75.5
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 4.1e-79 299.7 171 80.7
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.3e-61 240.7 196 62.8
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 5.6e-60 236.1 130 83.8
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 7.6e-57 225.7 134 80.6
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 4.9e-56 223.0 136 78.7
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 9.6e-52 208.8 157 65.6
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 3.5e-46 190.3 140 70.7
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 9.6e-36 155.6 94 80.9
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 1.0e-29 135.6 105 63.8
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 1.1e-12 79.0 59 64.4
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 2.2e-11 74.7 284 26.1
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.4e-07 62.0 128 32.8
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 3.2e-07 60.8 125 32.0
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 5.5e-07 60.1 155 28.4
PSO782G1764 Papaver somniferum HOM05D000776 ORTHO05D001624 2.1e-06 58.2 175 26.9
PSO478G2983 Papaver somniferum HOM05D000776 ORTHO05D001624 2.7e-06 57.8 175 26.3
Nn2g15146 Nelumbo nucifera HOM05D000776 ORTHO05D001624 7.9e-06 56.2 127 29.9


User provided reference genes

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