Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 1.1e-187 659.8 344 100.0
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 1.7e-172 609.4 344 91.6
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 3.0e-172 608.6 344 91.3
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 9.8e-168 593.6 344 87.8
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 1.5e-163 579.7 344 86.0
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 1.6e-162 576.2 344 84.9
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.1e-161 573.5 344 85.8
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 4.0e-161 571.6 344 84.6
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 5.2e-161 571.2 344 84.0
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 6.8e-161 570.9 344 84.0
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 4.4e-160 568.2 344 84.3
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 2.2e-159 565.8 344 83.4
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 2.9e-159 565.5 344 85.2
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 3.7e-159 565.1 344 83.4
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 3.7e-159 565.1 344 83.4
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 6.4e-159 564.3 344 83.7
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 8.3e-159 563.9 345 84.1
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 2.4e-158 562.4 345 83.5
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 2.4e-158 562.4 344 83.7
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 3.2e-158 562.0 344 82.8
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 5.4e-158 561.2 344 83.4
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 1.6e-157 559.7 344 82.8
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 1.6e-157 559.7 344 83.4
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 2.1e-157 559.3 344 83.7
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 7.8e-157 557.4 344 80.8
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 1.3e-156 556.6 346 84.4
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 1.7e-156 556.2 344 83.1
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 3.0e-156 555.4 344 83.1
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 3.9e-156 555.1 344 82.6
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 5.1e-156 554.7 345 82.9
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 1.5e-155 553.1 343 81.3
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 1.9e-155 552.7 347 82.7
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 2.5e-155 552.4 344 81.4
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 2.5e-155 552.4 344 82.0
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 2.4e-153 545.8 343 80.2
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 4.0e-153 545.0 344 79.4
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 1.5e-152 543.1 343 79.9
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 4.4e-152 541.6 344 80.8
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 1.3e-151 540.0 343 79.6
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 3.8e-151 538.5 343 79.0
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 4.9e-151 538.1 349 79.4
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 6.4e-151 537.7 344 79.1
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 1.4e-150 536.6 336 82.4
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 3.2e-150 535.4 343 78.1
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 4.2e-150 535.0 343 78.4
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 1.2e-149 533.5 343 78.4
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 3.5e-149 531.9 343 78.1
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 6.0e-149 531.2 343 77.8
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 6.0e-149 531.2 343 77.8
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 6.0e-149 531.2 344 79.4
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 6.0e-149 531.2 341 79.2
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 6.0e-149 531.2 344 78.5
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 1.0e-148 530.4 344 78.5
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 1.0e-148 530.4 344 79.7
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 1.0e-148 530.4 344 78.2
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 1.7e-148 529.6 343 77.6
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 1.7e-148 529.6 343 77.6
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 1.7e-148 529.6 343 77.6
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 1.7e-148 529.6 355 76.3
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 1.7e-148 529.6 343 77.6
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 2.3e-148 529.3 345 78.3
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 6.6e-148 527.7 345 78.3
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 8.7e-148 527.3 337 79.5
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 2.5e-147 525.8 344 79.1
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 3.3e-147 525.4 344 77.6
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 7.3e-147 524.2 346 78.6
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 9.6e-147 523.9 391 71.1
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 1.3e-146 523.5 367 75.7
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 1.6e-146 523.1 345 79.1
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 2.8e-146 522.3 355 75.5
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 4.8e-146 521.5 343 76.4
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 8.1e-146 520.8 344 77.3
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 8.1e-146 520.8 344 77.6
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 1.1e-145 520.4 345 79.1
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 2.4e-145 519.2 344 76.7
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 3.1e-145 518.8 350 77.1
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 1.2e-144 516.9 345 79.1
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 2.0e-144 516.2 346 77.5
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 9.9e-144 513.8 343 75.2
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 1.7e-143 513.1 344 76.2
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 8.4e-143 510.8 344 76.5
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 8.4e-143 510.8 336 75.3
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 7.1e-142 507.7 325 79.1
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 7.1e-142 507.7 414 67.6
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 2.3e-140 502.7 357 73.4
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 7.3e-139 497.7 343 75.5
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 1.3e-138 496.9 345 76.2
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 6.9e-137 491.1 308 78.9
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 5.8e-136 488.0 344 74.1
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.3e-135 486.9 307 81.1
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 3.8e-135 485.3 307 80.8
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 4.9e-135 485.0 272 89.3
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 5.4e-134 481.5 336 72.9
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 7.1e-134 481.1 335 74.0
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 3.0e-132 475.7 344 71.2
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 1.6e-130 469.9 307 77.9
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 2.4e-129 466.1 272 83.8
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 2.1e-125 453.0 344 70.9
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 2.7e-125 452.6 344 70.9
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 1.9e-123 446.4 400 62.8
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 1.3e-122 443.7 416 60.8
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 3.7e-122 442.2 294 78.9
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 5.8e-120 434.9 343 67.6
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.4e-118 430.3 344 67.2
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 7.2e-118 427.9 292 77.1
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.2e-117 427.2 344 66.6
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 1.8e-113 413.3 315 70.8
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 4.3e-107 392.1 222 86.5
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 1.1e-105 387.5 343 61.8
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 2.0e-104 383.3 222 85.6
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 3.9e-100 369.0 384 53.4
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 7.4e-99 364.8 246 76.4
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 9.7e-99 364.4 344 60.8
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.6e-93 347.1 204 86.8
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 2.3e-92 343.2 434 50.2
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 2.7e-85 319.7 344 54.4
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 3.1e-81 306.2 248 63.7
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 5.4e-81 305.4 335 49.3
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 6.5e-79 298.5 169 86.4
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 1.5e-78 297.4 200 75.0
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 2.7e-77 293.1 248 63.3
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 1.2e-67 261.2 255 57.6
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 9.8e-67 258.1 270 48.5
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 6.8e-60 235.3 164 76.2
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 2.4e-57 226.9 144 81.9
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 7.8e-56 221.9 238 56.7
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 9.5e-54 214.9 144 70.8
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 2.3e-52 210.3 194 57.7
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 1.3e-47 194.5 353 36.3
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 5.6e-46 189.1 131 74.0
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 3.6e-45 186.4 183 59.0
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 8.1e-45 185.3 110 85.5
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 1.1e-41 174.9 323 33.4
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 1.7e-39 167.5 336 33.9
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 1.9e-38 164.1 313 33.5
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 1.9e-38 164.1 131 68.7
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 2.3e-31 140.6 129 59.7
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 2.8e-29 133.7 94 73.4
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 1.8e-28 131.0 74 85.1
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 5.6e-22 109.4 73 69.9
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 4.8e-21 106.3 105 60.0
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 1.4e-20 104.8 95 64.2


User provided reference genes

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