Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 9.6e-115 416.8 201 100.0
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 6.6e-47 191.4 98 93.9
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.2e-45 187.2 108 83.3
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 8.0e-45 184.5 98 88.8
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 1.1e-44 184.1 98 88.8
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.8e-44 183.3 98 87.8
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.8e-44 183.3 98 87.8
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.8e-44 183.3 98 87.8
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 2.3e-44 183.0 138 66.7
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 2.3e-44 183.0 98 87.8
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 2.3e-44 183.0 99 85.9
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 3.1e-44 182.6 149 63.8
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 3.1e-44 182.6 101 84.2
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 4.0e-44 182.2 99 86.9
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 6.8e-44 181.4 98 85.7
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 8.9e-44 181.0 98 85.7
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.2e-43 180.6 98 85.7
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.2e-43 180.6 98 86.7
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 1.2e-43 180.6 98 84.7
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 1.5e-43 180.3 98 84.7
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 1.5e-43 180.3 98 86.7
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 2.0e-43 179.9 98 85.7
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 2.0e-43 179.9 98 85.7
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 3.4e-43 179.1 98 84.7
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 5.8e-43 178.3 98 84.7
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 7.5e-43 177.9 98 83.7
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 7.5e-43 177.9 98 84.7
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 9.8e-43 177.6 98 85.7
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 9.8e-43 177.6 98 84.7
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 9.8e-43 177.6 98 83.7
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.3e-42 177.2 99 81.8
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 1.3e-42 177.2 98 83.7
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 1.3e-42 177.2 98 82.7
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.7e-42 176.8 98 83.7
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.2e-42 176.4 99 81.8
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 2.2e-42 176.4 98 81.6
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 2.9e-42 176.0 98 82.7
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 3.7e-42 175.6 98 81.6
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 3.7e-42 175.6 98 81.6
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 4.9e-42 175.3 109 78.0
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 6.4e-42 174.9 98 81.6
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 6.4e-42 174.9 98 81.6
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 6.4e-42 174.9 98 81.6
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 6.4e-42 174.9 98 81.6
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 8.3e-42 174.5 98 80.6
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 8.3e-42 174.5 105 80.0
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 1.1e-41 174.1 125 68.8
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.4e-41 173.7 119 72.3
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.4e-41 173.7 98 82.7
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 1.9e-41 173.3 125 70.4
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.9e-41 173.3 98 82.7
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 1.9e-41 173.3 98 83.7
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.4e-41 172.9 129 69.8
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 2.4e-41 172.9 98 81.6
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 4.1e-41 172.2 125 69.6
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 4.1e-41 172.2 125 69.6
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 4.1e-41 172.2 125 69.6
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 4.1e-41 172.2 125 69.6
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 4.1e-41 172.2 125 69.6
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 4.1e-41 172.2 98 84.7
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 4.1e-41 172.2 98 81.6
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 5.4e-41 171.8 125 69.6
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 5.4e-41 171.8 98 80.6
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 5.4e-41 171.8 98 79.6
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 7.0e-41 171.4 99 80.8
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 7.0e-41 171.4 98 79.6
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 9.2e-41 171.0 125 69.6
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 9.2e-41 171.0 98 79.6
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.2e-40 170.6 119 71.4
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 1.2e-40 170.6 129 66.7
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 1.6e-40 170.2 98 78.6
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.6e-40 170.2 98 79.6
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 1.6e-40 170.2 100 78.0
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 3.5e-40 169.1 125 68.0
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 4.6e-40 168.7 98 79.6
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 6.0e-40 168.3 98 80.6
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 6.0e-40 168.3 99 80.8
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 7.8e-40 167.9 98 80.6
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 7.8e-40 167.9 98 78.6
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.3e-39 167.2 98 80.6
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 1.3e-39 167.2 125 67.2
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 3.9e-39 165.6 133 65.4
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 5.1e-39 165.2 98 79.6
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 1.1e-38 164.1 99 75.8
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 2.5e-38 162.9 98 78.6
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 5.6e-38 161.8 96 80.2
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.6e-38 161.8 96 80.2
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.6e-38 161.8 96 80.2
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.6e-38 161.8 96 80.2
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 7.3e-38 161.4 98 77.6
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.6e-37 160.2 96 79.2
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.6e-37 160.2 96 79.2
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 3.6e-37 159.1 96 78.1
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 8.1e-37 157.9 99 77.8
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 1.4e-33 147.1 104 67.3
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 5.4e-33 145.2 79 83.5
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 7.1e-33 144.8 116 64.7
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 2.1e-32 143.3 94 70.2
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 1.5e-30 137.1 100 64.0
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 9.5e-30 134.4 98 66.3
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 1.7e-26 123.6 99 56.6
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 8.4e-26 121.3 63 88.9
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 6.6e-23 111.7 59 91.5
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 7.1e-17 91.7 59 72.9
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 3.3e-14 82.8 41 95.1
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 4.0e-12 75.9 82 51.2
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 7.9e-08 61.6 44 61.4


User provided reference genes

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