Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p054693 Quercus lobata HOM05D021098 ORTHO05D024866 2.6e-65 251.9 128 100.0
QL02p033122 Quercus lobata HOM05D021098 ORTHO05D024866 5.1e-61 237.7 128 95.3
QL07p002581 Quercus lobata HOM05D021098 ORTHO05D024866 9.3e-47 190.3 116 87.1
QL11p009074 Quercus lobata HOM05D021098 ORTHO05D024866 2.5e-44 182.2 119 81.5
QL02p092804 Quercus lobata HOM05D001048 ORTHO05D000069 9.7e-44 180.3 119 80.7
CiPaw.15G174800 Carya illinoinensis HOM05D001048 ORTHO05D000069 3.8e-32 141.7 125 70.4
Cfa020843 Carpinus fangiana HOM05D001048 ORTHO05D000069 2.0e-25 119.4 126 62.7
CiPaw.16G114500 Carya illinoinensis HOM05D001048 ORTHO05D000069 2.0e-25 119.4 125 59.2
Haze_19228 Corylus avellana HOM05D001048 ORTHO05D000069 2.2e-24 115.9 127 60.6
Cfa012741 Carpinus fangiana HOM05D021098 ORTHO05D024866 2.1e-22 109.4 118 59.3
CANSAT11G0995 Cannabis sativa HOM05D001048 ORTHO05D000069 1.9e-15 86.3 151 50.3
VMungo1309G1338 Vigna mungo HOM05D001048 ORTHO05D000069 7.2e-15 84.3 124 50.8
Dinv41392 Davidia involucrata HOM05D001048 ORTHO05D000069 1.6e-14 83.2 141 44.7
Phvul.009G207000 Phaseolus vulgaris HOM05D001048 ORTHO05D000069 1.5e-12 76.6 116 49.1
Dinv42874 Davidia involucrata HOM05D001048 ORTHO05D000069 2.0e-12 76.3 143 41.3
Dinv43226 Davidia involucrata HOM05D001048 ORTHO05D000069 2.0e-12 76.3 143 41.3
MELO3C010237.2 Cucumis melo HOM05D001048 ORTHO05D000069 6.3e-11 71.2 134 43.3
CsaV3_1G028780 Cucumis sativus L. HOM05D001048 ORTHO05D000069 6.3e-11 71.2 134 43.3
ClCG06G012270 Citrullus lanatus HOM05D001048 ORTHO05D000069 1.1e-10 70.5 134 43.3
Glyma.09G098300 Glycine max HOM05D001048 ORTHO05D000069 1.4e-10 70.1 123 48.0
Hma1.2p1_0222F.1_g093370 Hydrangea macrophylla HOM05D001048 ORTHO05D000069 7.0e-10 67.8 123 43.9
Sed0000198 Sechium edule HOM05D001048 ORTHO05D000069 5.9e-09 64.7 126 42.1
Hma1.2p1_0028F.1_g017410 Hydrangea macrophylla HOM05D001048 ORTHO05D000069 7.7e-09 64.3 144 38.9
Potri.018G109500 Populus trichocarpa HOM05D001048 ORTHO05D000069 1.0e-08 63.9 77 53.2
Atru.chr7.84 Acer truncatum HOM05D001048 ORTHO05D000069 1.3e-08 63.5 117 41.9
Cfa021937 Carpinus fangiana HOM05D021098 ORTHO05D000069 1.3e-08 63.5 70 60.0
Manes.14G112400 Manihot esculenta HOM05D001048 ORTHO05D000069 1.3e-08 63.5 133 39.8
Gohir.D05G053400 Gossypium hirsutum HOM05D001048 ORTHO05D000069 3.8e-08 62.0 116 41.4
Nn8g39838 Nelumbo nucifera HOM05D001048 ORTHO05D000069 5.0e-08 61.6 182 34.6
Potri.006G186600 Populus trichocarpa HOM05D001048 ORTHO05D000069 1.1e-07 60.5 80 50.0
Gohir.A05G051900 Gossypium hirsutum HOM05D001048 ORTHO05D000069 1.5e-07 60.1 116 41.4
Gorai.009G055200 Gossypium raimondii HOM05D001048 ORTHO05D000069 1.5e-07 60.1 116 40.5
Duzib168G2379 Durio zibethinus HOM05D001048 ORTHO05D000069 5.5e-07 58.2 128 39.1
TAR636G1973 Trochodendron aralioides HOM05D001048 ORTHO05D000069 1.2e-06 57.0 170 33.5
Ciclev10008192m.g Citrus clementina HOM05D001048 ORTHO05D000069 2.7e-06 55.8 132 37.1
Duzib150G1390 Durio zibethinus HOM05D001048 ORTHO05D000069 3.6e-06 55.5 126 38.9
Sed0012092 Sechium edule HOM05D001048 ORTHO05D000069 4.7e-06 55.1 110 40.0
TAR625G0948 Trochodendron aralioides HOM05D001048 ORTHO05D000069 6.1e-06 54.7 168 35.7


User provided reference genes

Program Settings