Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p053642 Quercus lobata HOM05D002270 ORTHO05D002866 8.8e-215 750.0 367 100.0
QL01p053604 Quercus lobata HOM05D002270 ORTHO05D002866 5.9e-187 657.5 339 96.5
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 4.9e-165 584.7 358 84.6
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 1.3e-112 410.6 359 65.7
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 1.2e-110 404.1 359 64.9
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 1.8e-87 327.0 356 52.5
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 2.0e-86 323.6 359 52.1
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 4.5e-86 322.4 356 52.0
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 1.0e-85 321.2 349 53.0
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.2e-83 314.3 364 50.5
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 1.6e-83 313.9 357 50.7
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 1.6e-83 313.9 357 51.0
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 4.7e-83 312.4 356 50.0
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 6.1e-83 312.0 357 50.7
arahy.Tifrunner.gnm1.ann1.VXKY2I Arachis hypogaea HOM05D002270 ORTHO05D002866 3.0e-82 309.7 342 50.9
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 5.2e-82 308.9 354 52.3
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 1.5e-81 307.4 344 51.2
TAR636G1163 Trochodendron aralioides HOM05D002270 ORTHO05D002866 1.7e-80 303.9 359 49.6
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 3.7e-80 302.8 365 50.4
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.7e-80 302.8 365 50.4
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 4.8e-80 302.4 370 47.6
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.1e-79 301.2 354 52.0
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 1.1e-79 301.2 366 50.5
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 5.3e-79 298.9 366 50.0
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 1.2e-78 297.7 355 50.1
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 2.7e-78 296.6 357 49.6
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 2.7e-78 296.6 347 50.1
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 4.5e-78 295.8 357 49.6
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.3e-77 294.3 365 49.9
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 2.2e-77 293.5 368 47.0
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 2.7e-75 286.6 383 46.7
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 8.0e-75 285.0 367 47.7
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 2.3e-74 283.5 362 46.7
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 8.8e-74 281.6 341 48.7
Oeu047969.1 Olea europaea HOM05D002270 ORTHO05D002866 2.0e-73 280.4 321 48.3
QL93p0107_0362 Quercus lobata HOM05D002270 ORTHO05D002866 2.0e-73 280.4 134 98.5
vmacro22219 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 9.8e-73 278.1 363 47.9
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 3.8e-69 266.2 357 46.8
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 5.0e-69 265.8 372 43.8
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 1.5e-68 264.2 360 47.2
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 5.5e-68 262.3 356 45.2
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 7.2e-68 261.9 323 46.7
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.6e-67 260.8 460 39.6
TPR.G29953 Trifolium pratense HOM05D002270 ORTHO05D002866 1.6e-67 260.8 367 45.2
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 3.0e-66 256.5 358 44.1
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 4.0e-66 256.1 354 44.1
COL.COLO4_12569 Corchorus olitorius HOM05D002270 ORTHO05D002866 6.8e-66 255.4 321 49.5
Nitab4.5_0000433g0190 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.2e-65 254.6 365 43.8
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.5e-65 254.2 389 44.0
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 9.8e-65 251.5 287 49.5
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 1.1e-63 248.1 363 42.7
QL01p054873 Quercus lobata HOM05D002270 ORTHO05D002866 2.4e-63 246.9 130 96.2
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 1.6e-62 244.2 329 46.2
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 1.6e-62 244.2 370 41.4
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 2.7e-62 243.4 363 42.4
Lalb_Chr20g0113881 Lupinus albus HOM05D002270 ORTHO05D002866 1.3e-61 241.1 278 49.3
Solyc04g072270.1 Solanum lycopersicum HOM05D002270 ORTHO05D002866 8.6e-61 238.4 362 41.4
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 1.1e-60 238.0 366 41.0
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 2.1e-59 233.8 370 39.2
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 2.8e-59 233.4 363 41.9
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 1.0e-58 231.5 372 39.8
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.0e-58 231.5 450 37.6
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 2.3e-58 230.3 372 41.4
Peaxi162Scf00226g00824 Petunia axillaris HOM05D002270 ORTHO05D002866 6.8e-58 228.8 371 38.8
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 1.2e-57 228.0 369 41.2
Lsat_1_v5_gn_7_1981 Lactuca sativa HOM05D002270 ORTHO05D002866 1.2e-57 228.0 375 39.7
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 1.5e-57 227.6 375 39.5
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 2.6e-57 226.9 377 39.3
ECA232G4141 Erigeron canadensis HOM05D002270 ORTHO05D002866 7.5e-57 225.3 370 41.6
Hund05751 Selenicereus undatus HOM05D002270 ORTHO05D002866 3.7e-56 223.0 369 40.4
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 8.3e-56 221.9 338 43.8
TPR.G9777 Trifolium pratense HOM05D002270 ORTHO05D002866 1.6e-54 217.6 339 41.9
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 5.6e-52 209.1 367 40.1
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 1.2e-51 208.0 355 39.7
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 1.6e-51 207.6 372 40.1
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 2.8e-51 206.8 352 38.1
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 8.0e-51 205.3 362 40.1
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 1.1e-50 204.9 385 38.7
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 1.4e-50 204.5 352 38.1
Nitab4.5_0003025g0030 Nicotiana tabacum HOM05D002270 ORTHO05D002866 3.1e-50 203.4 291 42.6
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 5.2e-50 202.6 353 39.4
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.2e-49 201.4 354 40.7
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 3.4e-49 199.9 361 39.6
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 4.4e-49 199.5 365 39.7
Sp5g22070 Schrenkiella parvula HOM05D002270 ORTHO05D002866 7.5e-49 198.7 369 38.8
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 2.2e-48 197.2 366 38.0
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 6.4e-48 195.7 346 37.0
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 1.1e-47 194.9 344 40.4
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 1.4e-47 194.5 359 37.3
Ah.08g216540 Amaranthus hybridus HOM05D002270 ORTHO05D002866 7.0e-47 192.2 401 35.7
CDE12G0416 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 2.7e-46 190.3 316 39.9
ATR0736G170 Amborella trichopoda HOM05D002270 ORTHO05D002866 1.5e-44 184.5 365 37.8
QL93p0381_0021 Quercus lobata HOM05D002270 ORTHO05D002866 7.3e-44 182.2 131 74.0
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.8e-42 177.6 329 38.6
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 4.4e-41 172.9 228 46.1
VMungo0331G1745 Vigna mungo HOM05D000103 ORTHO05D000049 3.2e-39 166.8 209 46.9
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 9.5e-36 155.2 211 43.6
Cpa.g.sc30.17 Carica papaya HOM05D002270 ORTHO05D002866 1.6e-35 154.5 132 57.6
Os10g0456950 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 2.8e-35 153.7 245 37.6
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 2.6e-33 147.1 309 36.9
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 5.8e-33 146.0 302 37.4
Cpa.g.sc30.16 Carica papaya HOM05D002270 ORTHO05D002866 1.7e-32 144.4 211 41.2
TPR.G36181 Trifolium pratense HOM05D002270 ORTHO05D002866 9.2e-31 138.7 130 55.4
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 1.2e-30 138.3 366 30.6
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 1.1e-28 131.7 131 54.2
VMungo0464G1016 Vigna mungo HOM05D002270 ORTHO05D002866 4.3e-28 129.8 116 61.2
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 4.0e-26 123.2 270 33.3
Psat4g187880 Pisum sativum HOM05D002270 ORTHO05D002866 5.2e-26 122.9 104 61.5
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 9.0e-26 122.1 369 27.9
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 5.8e-25 119.4 130 52.3
BcaC03g14803 Brassica carinata HOM05D002270 ORTHO05D002866 1.4e-23 114.8 371 29.6
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 1.6e-22 111.3 154 44.8
C05p38670 Brassica napus HOM05D002270 ORTHO05D002866 1.3e-21 108.2 117 52.1
SEGI_23610 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.2e-17 95.1 266 30.5
Psat4g184160 Pisum sativum HOM05D002270 ORTHO05D002866 2.4e-15 87.4 184 33.2
SEGI_39038 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 4.2e-15 86.7 117 39.3
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 4.2e-15 86.7 107 48.6
CBR_g742 Chara braunii HOM05D002270 ORTHO05D002866 2.7e-14 84.0 383 25.6
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 2.5e-12 77.4 50 80.0
Nitab4.5_0003025g0040 Nicotiana tabacum HOM05D002270 ORTHO05D002866 4.0e-10 70.1 46 71.7
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 9.9e-09 65.5 131 32.8
SEGI_19104 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.4e-07 60.8 100 36.0
SEGI_35812 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 4.6e-06 56.6 126 34.9


User provided reference genes

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